RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 CASS4Q9NQ75 786 aa5.87□□□□□ -1.47
CCL20-204ENST00000489160 HPSEQ9Y251 543 aa5.87□□□□□ -1.47
CCL20-204ENST00000489160 hCG_1642624A0A1W2PR95 340 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 PPM1DO15297 605 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 TLR5O60602 858 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 HNRNPMP52272 730 aaKnown RBP eCLIP5.86□□□□□ -1.47
CCL20-204ENST00000489160 BCAT1P54687 386 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 PTPAQ15257 358 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 ELF2Q15723 593 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 MAPKAPK3Q16644 382 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 SLC5A9Q2M3M2 681 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 ZACNQ401N2 412 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 CCDC38Q502W7 563 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.86□□□□□ -1.47
CCL20-204ENST00000489160 TEDDM1Q5T9Z0 273 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 MANEALQ5VSG8 457 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 ANO1Q5XXA6 986 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 GGT6Q6P531 493 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 DTX2Q86UW9 622 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 CCDC28AQ8IWP9 274 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 ABRAQ8N0Z2 381 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 PAF1Q8N7H5 531 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 MYCBPAPQ8TBZ2 947 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 TMEM171Q8WVE6 324 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 PPM1EQ8WY54 764 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 PGBD1Q96JS3 809 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 HERPUD2Q9BSE4 406 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 MLST8Q9BVC4 326 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 PCDHAC1Q9H158 963 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 KCTD5Q9NXV2 234 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 TERF2IPQ9NYB0 399 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 TMOD4Q9NZQ9 345 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 DNAJB11Q9UBS4 358 aa5.86□□□□□ -1.47
CCL20-204ENST00000489160 ZMYND8Q9ULU4 1186 aaPredicted RBP5.86□□□□□ -1.47
CCL20-204ENST00000489160 CSTBP04080 98 aaKnown RBP5.85□□□□□ -1.47
CCL20-204ENST00000489160 TYRP1P17643 537 aa5.85□□□□□ -1.47
CCL20-204ENST00000489160 ADORA2AP29274 412 aa5.85□□□□□ -1.47
CCL20-204ENST00000489160 EPHA3P29320 983 aa5.85□□□□□ -1.47
CCL20-204ENST00000489160 PDIA3P30101 505 aaKnown RBP5.85□□□□□ -1.47
CCL20-204ENST00000489160 SLC5A2P31639 672 aa5.85□□□□□ -1.47
CCL20-204ENST00000489160 UQCRC1P31930 480 aa5.85□□□□□ -1.47
CCL20-204ENST00000489160 CHKAP35790 457 aa5.85□□□□□ -1.47
CCL20-204ENST00000489160 PFKFB4Q16877 469 aa5.85□□□□□ -1.47
CCL20-204ENST00000489160 TUBB8Q3ZCM7 444 aa5.85□□□□□ -1.47
CCL20-204ENST00000489160 DEPDC1Q5TB30 811 aa5.85□□□□□ -1.47
CCL20-204ENST00000489160 FNDC7Q5VTL7 733 aa5.85□□□□□ -1.47
CCL20-204ENST00000489160 CCDC174Q6PII3 467 aa5.85□□□□□ -1.47
CCL20-204ENST00000489160 CRIP3Q6Q6R5 217 aa5.85□□□□□ -1.47
CCL20-204ENST00000489160 USP49Q70CQ1 688 aa5.85□□□□□ -1.47
CCL20-204ENST00000489160 IZUMO1Q8IYV9 350 aa5.85□□□□□ -1.47
CCL20-204ENST00000489160 TOR1AIP2Q8NFQ8 470 aa5.85□□□□□ -1.47
CCL20-204ENST00000489160 UBE2Q2Q8WVN8 375 aa5.85□□□□□ -1.47
CCL20-204ENST00000489160 ATRIPQ8WXE1 791 aa5.85□□□□□ -1.47
CCL20-204ENST00000489160 ZDHHC12Q96GR4 267 aa5.85□□□□□ -1.47
CCL20-204ENST00000489160 Q96MF0 132 aa5.85□□□□□ -1.47
CCL20-204ENST00000489160 WDR11Q9BZH6 1224 aa5.85□□□□□ -1.47
CCL20-204ENST00000489160 SLC25A32Q9H2D1 315 aa5.85□□□□□ -1.47
CCL20-204ENST00000489160 TMEM8AQ9HCN3 771 aa5.85□□□□□ -1.47
CCL20-204ENST00000489160 PNMA2Q9UL42 364 aa5.85□□□□□ -1.47
CCL20-204ENST00000489160 SNX14Q9Y5W7 946 aa5.85□□□□□ -1.47
CCL20-204ENST00000489160 YY2O15391 372 aa5.84□□□□□ -1.47
CCL20-204ENST00000489160 PEX1O43933 1283 aa5.84□□□□□ -1.47
CCL20-204ENST00000489160 CCNT2O60583 730 aaKnown RBP5.84□□□□□ -1.47
CCL20-204ENST00000489160 NBNO60934 754 aa5.84□□□□□ -1.47
CCL20-204ENST00000489160 PDHA1P08559 390 aa5.84□□□□□ -1.47
CCL20-204ENST00000489160 HGFP14210 728 aa5.84□□□□□ -1.47
CCL20-204ENST00000489160 MAKP20794 623 aa5.84□□□□□ -1.47
CCL20-204ENST00000489160 MST1P26927 711 aa5.84□□□□□ -1.47
CCL20-204ENST00000489160 PGDP52209 483 aa5.84□□□□□ -1.47
CCL20-204ENST00000489160 ATXN1P54253 815 aaKnown RBP5.84□□□□□ -1.47
CCL20-204ENST00000489160 TIAL1Q01085 375 aaKnown RBP eCLIP5.84□□□□□ -1.472e-8■■■□□ 15.3
CCL20-204ENST00000489160 NSUN2Q08J23 767 aaKnown RBP eCLIP5.84□□□□□ -1.47
CCL20-204ENST00000489160 SPARCL1Q14515 664 aa5.84□□□□□ -1.47
CCL20-204ENST00000489160 INO80DQ53TQ3 878 aaPredicted RBP5.84□□□□□ -1.47
CCL20-204ENST00000489160 RAP1GAP2Q684P5 730 aa5.84□□□□□ -1.47
CCL20-204ENST00000489160 TLDC1Q6P9B6 456 aa5.84□□□□□ -1.47
CCL20-204ENST00000489160 LCORLQ8N3X6 602 aa5.84□□□□□ -1.47
CCL20-204ENST00000489160 IPO4Q8TEX9 1081 aaKnown RBP5.84□□□□□ -1.47
CCL20-204ENST00000489160 FKBP10Q96AY3 582 aa5.84□□□□□ -1.47
CCL20-204ENST00000489160 LTV1Q96GA3 475 aaPredicted RBP5.84□□□□□ -1.47
CCL20-204ENST00000489160 RMDN3Q96TC7 470 aa5.84□□□□□ -1.47
CCL20-204ENST00000489160 AIFM2Q9BRQ8 373 aa5.84□□□□□ -1.47
CCL20-204ENST00000489160 ALG8Q9BVK2 526 aa5.84□□□□□ -1.47
CCL20-204ENST00000489160 INO80BQ9C086 356 aaPredicted RBP5.84□□□□□ -1.47
CCL20-204ENST00000489160 GLOD4Q9HC38 313 aa5.84□□□□□ -1.47
CCL20-204ENST00000489160 OBP2BQ9NPH6 170 aa5.84□□□□□ -1.47
CCL20-204ENST00000489160 KLC4Q9NSK0 619 aa5.84□□□□□ -1.47
CCL20-204ENST00000489160 BCCIPQ9P287 314 aaKnown RBP eCLIP5.84□□□□□ -1.47
CCL20-204ENST00000489160 VPS51Q9UID3 782 aa5.84□□□□□ -1.47
CCL20-204ENST00000489160 CA14Q9ULX7 337 aa5.84□□□□□ -1.47
CCL20-204ENST00000489160 USP22Q9UPT9 525 aa5.84□□□□□ -1.47
CCL20-204ENST00000489160 ADGRA2Q96PE1 1338 aa5.83□□□□□ -1.48
CCL20-204ENST00000489160 LGALS16A8MUM7 142 aa5.83□□□□□ -1.48
CCL20-204ENST00000489160 NPC1O15118 1278 aa5.83□□□□□ -1.48
CCL20-204ENST00000489160 SLC16A3O15427 465 aaKnown RBP5.83□□□□□ -1.48
CCL20-204ENST00000489160 SNX2O60749 519 aa5.83□□□□□ -1.48
CCL20-204ENST00000489160 RHOP08100 348 aa5.83□□□□□ -1.48
CCL20-204ENST00000489160 TACR2P21452 398 aa5.83□□□□□ -1.48
CCL20-204ENST00000489160 ZEB1P37275 1124 aaPredicted RBP5.83□□□□□ -1.48
CCL20-204ENST00000489160 HALP42357 657 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms