RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 SCN4BQ8IWT1 228 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 PIK3R5Q8WYR1 880 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 KRT35Q92764 455 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 GOLGA1Q92805 767 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 CD101Q93033 1021 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 FAM149B1Q96BN6 582 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 CNPY3Q9BT09 278 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 HERC2P3Q9BVR0 1158 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 UBXN6Q9BZV1 441 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 CARD9Q9H257 536 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 CSNK1G1Q9HCP0 422 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 PNPLA8Q9NP80 782 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 ASNSD1Q9NWL6 643 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 CXXC1Q9P0U4 656 aaPredicted RBP10.52□□□□□ -0.73
USP11-211ENST00000489111 INSL6Q9Y581 213 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 KIAA0100Q14667 2235 aaKnown RBP10.52□□□□□ -0.73
USP11-211ENST00000489111 SCN5AQ14524 2016 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 UQCRHLA0A096LP55 91 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 F8VP50 259 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 DPYSL4O14531 572 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 TRIM66O15016 1216 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 DDX3YO15523 660 aaKnown RBP10.51□□□□□ -0.73
USP11-211ENST00000489111 TLL1O43897 1013 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 DAB1O75553 588 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 RNF8O76064 485 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 BEST1O76090 585 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 SOD2P04179 222 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 UQCRHP07919 91 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 CETN2P41208 172 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 MAGEA11P43364 429 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 MARCKSL1P49006 195 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 ZNF143P52747 638 aaPredicted RBP10.51□□□□□ -0.73
USP11-211ENST00000489111 CACNA2D1P54289 1103 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 HTRA4P83105 476 aaPredicted RBP10.51□□□□□ -0.73
USP11-211ENST00000489111 OGDHQ02218 1023 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 KRT17Q04695 432 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 ZNF252P-AS1Q0IIN9 211 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 ACAP1Q15027 740 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 HADHQ16836 314 aaKnown RBP10.51□□□□□ -0.73
USP11-211ENST00000489111 CC2D1AQ6P1N0 951 aaPredicted RBP10.51□□□□□ -0.73
USP11-211ENST00000489111 VSTM1Q6UX27 236 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 TAS1R1Q7RTX1 841 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 CPNE8Q86YQ8 564 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 CREG2Q8IUH2 290 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 ZMIZ2Q8NF64 920 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 PHOSPHO2Q8TCD6 241 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 CLEC4CQ8WTT0 213 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 C2orf15Q8WU43 125 aaKnown RBP10.51□□□□□ -0.73
USP11-211ENST00000489111 RXFP2Q8WXD0 754 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 ALG3Q92685 438 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 ABHD8Q96I13 439 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 PIWIL1Q96J94 861 aaKnown RBP10.51□□□□□ -0.73
USP11-211ENST00000489111 RPGRIP1Q96KN7 1286 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 RNPC3Q96LT9 517 aaKnown RBP10.51□□□□□ -0.73
USP11-211ENST00000489111 PGLYRP2Q96PD5 576 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 KCNK16Q96T55 309 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 NAP1L3Q99457 506 aaPredicted RBP10.51□□□□□ -0.73
USP11-211ENST00000489111 RAD9AQ99638 391 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 NCAPGQ9BPX3 1015 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 TRIM62Q9BVG3 475 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 ULBP1Q9BZM6 244 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 CNGB3Q9NQW8 809 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 MTRRQ9UBK8 725 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 TMEM59LQ9UK28 342 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 PCDHA3Q9Y5H8 950 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 NR2E3Q9Y5X4 410 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 BACE2Q9Y5Z0 518 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 CDY1Q9Y6F8 540 aa10.51□□□□□ -0.73
USP11-211ENST00000489111 TTC3P53804 2025 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 LTBP2Q14767 1821 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 CCDC85CA6NKD9 419 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 C2CD4BA6NLJ0 364 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 C2CD2LO14523 706 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 TADA3O75528 432 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 GABBR2O75899 941 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 ZBED1O96006 694 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 KRT1P04264 644 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 GLI1P08151 1106 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 KRT7P08729 469 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 CYP2F1P24903 491 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 FLT3P36888 993 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 PTPN9P43378 593 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 RABGGTBP53611 331 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 SLC5A3P53794 718 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 TERF1P54274 439 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 TUBB4BP68371 445 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 MRPS5P82675 430 aaKnown RBP10.5□□□□□ -0.73
USP11-211ENST00000489111 DSG1Q02413 1049 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 CREMQ03060 361 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 ADCY1Q08828 1119 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 GPR17Q13304 367 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 ZNF211Q13398 564 aaPredicted RBP10.5□□□□□ -0.73
USP11-211ENST00000489111 SMC1AQ14683 1233 aaKnown RBP10.5□□□□□ -0.73
USP11-211ENST00000489111 TAF5Q15542 800 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 RAB41Q5JT25 222 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 TEX35Q5T0J7 233 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 LRRC38Q5VT99 294 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 DAB2IPQ5VWQ8 1189 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 ARCQ7LC44 396 aa10.5□□□□□ -0.73
USP11-211ENST00000489111 GPRIN1Q7Z2K8 1008 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms