RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 C3orf20Q8ND61 904 aa16.88■□□□□ 0.29
CLDN11-208ENST00000488989 TIFAQ96CG3 184 aa16.88■□□□□ 0.29
CLDN11-208ENST00000488989 CALR3Q96L12 384 aaKnown RBP16.88■□□□□ 0.29
CLDN11-208ENST00000488989 EMILIN2Q9BXX0 1053 aa16.88■□□□□ 0.29
CLDN11-208ENST00000488989 UVRAGQ9P2Y5 699 aa16.88■□□□□ 0.29
CLDN11-208ENST00000488989 SALL4Q9UJQ4 1053 aa16.88■□□□□ 0.29
CLDN11-208ENST00000488989 DUSP10Q9Y6W6 482 aa16.88■□□□□ 0.29
CLDN11-208ENST00000488989 TNFRSF10BO14763 440 aa16.87■□□□□ 0.29
CLDN11-208ENST00000488989 PAPSS1O43252 624 aaPredicted RBP16.87■□□□□ 0.29
CLDN11-208ENST00000488989 ADH1AP07327 375 aa16.87■□□□□ 0.29
CLDN11-208ENST00000488989 MSNP26038 577 aaKnown RBP16.87■□□□□ 0.29
CLDN11-208ENST00000488989 GRIK1P39086 918 aa16.87■□□□□ 0.29
CLDN11-208ENST00000488989 TUFMP49411 452 aaKnown RBP16.87■□□□□ 0.29
CLDN11-208ENST00000488989 ADCY1Q08828 1119 aa16.87■□□□□ 0.29
CLDN11-208ENST00000488989 DUSP4Q13115 394 aa16.87■□□□□ 0.29
CLDN11-208ENST00000488989 ARHGAP29Q52LW3 1261 aa16.87■□□□□ 0.29
CLDN11-208ENST00000488989 C2CD6Q53TS8 623 aa16.87■□□□□ 0.29
CLDN11-208ENST00000488989 PPP1R15BQ5SWA1 713 aa16.87■□□□□ 0.29
CLDN11-208ENST00000488989 PLPP4Q5VZY2 271 aa16.87■□□□□ 0.29
CLDN11-208ENST00000488989 TTC9BQ8N6N2 239 aa16.87■□□□□ 0.29
CLDN11-208ENST00000488989 SPATA17Q96L03 361 aa16.87■□□□□ 0.29
CLDN11-208ENST00000488989 LRRC4Q9HBW1 653 aa16.87■□□□□ 0.29
CLDN11-208ENST00000488989 ST7Q9NRC1 585 aa16.87■□□□□ 0.29
CLDN11-208ENST00000488989 IL37Q9NZH6 218 aa16.87■□□□□ 0.29
CLDN11-208ENST00000488989 TRIM10Q9UDY6 481 aa16.87■□□□□ 0.29
CLDN11-208ENST00000488989 USP3Q9Y6I4 520 aa16.87■□□□□ 0.29
CLDN11-208ENST00000488989 SCINQ9Y6U3 715 aa16.87■□□□□ 0.29
CLDN11-208ENST00000488989 FAM170AA1A519 330 aa16.86■□□□□ 0.29
CLDN11-208ENST00000488989 HIDE1A8MVS5 230 aa16.86■□□□□ 0.29
CLDN11-208ENST00000488989 ESPNB1AK53 854 aa16.86■□□□□ 0.29
CLDN11-208ENST00000488989 ATMINO43313 823 aaPredicted RBP16.86■□□□□ 0.29
CLDN11-208ENST00000488989 FBXO21O94952 628 aa16.86■□□□□ 0.29
CLDN11-208ENST00000488989 SEC24AO95486 1093 aa16.86■□□□□ 0.29
CLDN11-208ENST00000488989 IRS1P35568 1242 aa16.86■□□□□ 0.29
CLDN11-208ENST00000488989 CDR1P51861 262 aa16.86■□□□□ 0.29
CLDN11-208ENST00000488989 RPL10AP62906 217 aaKnown RBP16.86■□□□□ 0.29
CLDN11-208ENST00000488989 MAMLD1Q13495 774 aa16.86■□□□□ 0.29
CLDN11-208ENST00000488989 CYP4A22Q5TCH4 519 aa16.86■□□□□ 0.29
CLDN11-208ENST00000488989 OLFML1Q6UWY5 402 aa16.86■□□□□ 0.29
CLDN11-208ENST00000488989 FAM183BPQ6ZVS7 135 aa16.86■□□□□ 0.29
CLDN11-208ENST00000488989 GPRIN1Q7Z2K8 1008 aa16.86■□□□□ 0.29
CLDN11-208ENST00000488989 TCEAL8Q8IYN2 117 aa16.86■□□□□ 0.29
CLDN11-208ENST00000488989 SLC35G2Q8TBE7 412 aa16.86■□□□□ 0.29
CLDN11-208ENST00000488989 SYNCQ9H7C4 482 aa16.86■□□□□ 0.29
CLDN11-208ENST00000488989 MRPL47Q9HD33 250 aaKnown RBP16.86■□□□□ 0.29
CLDN11-208ENST00000488989 LZTFL1Q9NQ48 299 aa16.86■□□□□ 0.29
CLDN11-208ENST00000488989 CNGB3Q9NQW8 809 aa16.86■□□□□ 0.29
CLDN11-208ENST00000488989 PARVAQ9NVD7 372 aa16.86■□□□□ 0.29
CLDN11-208ENST00000488989 COMMD8Q9NX08 183 aa16.86■□□□□ 0.29
CLDN11-208ENST00000488989 SIGLEC16A6NMB1 481 aa16.85■□□□□ 0.29
CLDN11-208ENST00000488989 ZNF500O60304 480 aaPredicted RBP16.85■□□□□ 0.29
CLDN11-208ENST00000488989 SLC6A3Q01959 620 aa16.85■□□□□ 0.29
CLDN11-208ENST00000488989 ADIGQ0VDE8 80 aa16.85■□□□□ 0.29
CLDN11-208ENST00000488989 MGAT5BQ3V5L5 792 aa16.85■□□□□ 0.29
CLDN11-208ENST00000488989 PM20D1Q6GTS8 502 aa16.85■□□□□ 0.29
CLDN11-208ENST00000488989 LLGL2Q6P1M3 1020 aa16.85■□□□□ 0.29
CLDN11-208ENST00000488989 DNAJC24Q6P3W2 148 aa16.85■□□□□ 0.29
CLDN11-208ENST00000488989 ARCQ7LC44 396 aa16.85■□□□□ 0.29
CLDN11-208ENST00000488989 SCN4BQ8IWT1 228 aa16.85■□□□□ 0.29
CLDN11-208ENST00000488989 ARNTL2Q8WYA1 636 aa16.85■□□□□ 0.29
CLDN11-208ENST00000488989 KHSRPQ92945 711 aaKnown RBP eCLIP16.85■□□□□ 0.29
CLDN11-208ENST00000488989 NUP85Q9BW27 656 aa16.85■□□□□ 0.29
CLDN11-208ENST00000488989 CERS4Q9HA82 394 aa16.85■□□□□ 0.29
CLDN11-208ENST00000488989 ASNSD1Q9NWL6 643 aa16.85■□□□□ 0.29
CLDN11-208ENST00000488989 MYO1AQ9UBC5 1043 aa16.85■□□□□ 0.29
CLDN11-208ENST00000488989 FBXW11Q9UKB1 542 aa16.85■□□□□ 0.29
CLDN11-208ENST00000488989 GUCA1BQ9UMX6 200 aa16.85■□□□□ 0.29
CLDN11-208ENST00000488989 COG5Q9UP83 839 aa16.85■□□□□ 0.29
CLDN11-208ENST00000488989 SLC27A5Q9Y2P5 690 aa16.85■□□□□ 0.29
CLDN11-208ENST00000488989 DENND4CQ5VZ89 1909 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 FAM92AA1XBS5 289 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 EPOPA6NHQ4 379 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 TGM5O43548 720 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 LPXNO60711 386 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 GLI1P08151 1106 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 LCP1P13796 627 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 ATF6P18850 670 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 GPR15P49685 360 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 TKTL1P51854 596 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 SLC5A3P53794 718 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 DAOAP59103 153 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 MRPS5P82675 430 aaKnown RBP16.84■□□□□ 0.29
CLDN11-208ENST00000488989 IFI16Q16666 785 aaKnown RBP16.84■□□□□ 0.29
CLDN11-208ENST00000488989 DDR2Q16832 855 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 OR6B2Q6IFH4 312 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 NYAP1Q6ZVC0 841 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 RTL10Q7L3V2 364 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 SLC26A9Q7LBE3 791 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 BHLHA9Q7RTU4 235 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 SCUBE3Q8IX30 993 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 NUP93Q8N1F7 819 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 TPCN2Q8NHX9 752 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 FEZF2Q8TBJ5 459 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 ZNF564Q8TBZ8 553 aaPredicted RBP16.84■□□□□ 0.29
CLDN11-208ENST00000488989 IRGQQ8WZA9 623 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 SEPT5Q99719 369 aaPredicted RBP16.84■□□□□ 0.29
CLDN11-208ENST00000488989 ULBP1Q9BZM6 244 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 OSGEPQ9NPF4 335 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 CTTNBP2NLQ9P2B4 639 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 TMEM59LQ9UK28 342 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms