RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 ANXA13P27216 316 aa11.5□□□□□ -0.57
YIPF3-207ENST00000488966 KIR2DL1P43626 348 aaPredicted RBP11.5□□□□□ -0.57
YIPF3-207ENST00000488966 LMAN2Q12907 356 aa11.5□□□□□ -0.57
YIPF3-207ENST00000488966 TAF10Q12962 218 aa11.5□□□□□ -0.57
YIPF3-207ENST00000488966 SV2BQ7L1I2 683 aa11.5□□□□□ -0.57
YIPF3-207ENST00000488966 SYT12Q8IV01 421 aa11.5□□□□□ -0.57
YIPF3-207ENST00000488966 GPD1LQ8N335 351 aa11.5□□□□□ -0.57
YIPF3-207ENST00000488966 KIAA1958Q8N8K9 716 aa11.5□□□□□ -0.57
YIPF3-207ENST00000488966 MYCBPAPQ8TBZ2 947 aa11.5□□□□□ -0.57
YIPF3-207ENST00000488966 ANKRD36BP1Q96IX9 119 aa11.5□□□□□ -0.57
YIPF3-207ENST00000488966 SPACA7Q96KW9 195 aa11.5□□□□□ -0.57
YIPF3-207ENST00000488966 CEP295NLQ96MC4 621 aa11.5□□□□□ -0.57
YIPF3-207ENST00000488966 CLIC6Q96NY7 704 aa11.5□□□□□ -0.57
YIPF3-207ENST00000488966 MRPL45Q9BRJ2 306 aaKnown RBP11.5□□□□□ -0.57
YIPF3-207ENST00000488966 NUSAP1Q9BXS6 441 aaKnown RBP11.5□□□□□ -0.57
YIPF3-207ENST00000488966 FSCN3Q9NQT6 498 aa11.5□□□□□ -0.57
YIPF3-207ENST00000488966 CFAP97Q9P2B7 532 aa11.5□□□□□ -0.57
YIPF3-207ENST00000488966 CCDC39Q9UFE4 941 aa11.5□□□□□ -0.57
YIPF3-207ENST00000488966 FBXO2Q9UK22 296 aaPredicted RBP11.5□□□□□ -0.57
YIPF3-207ENST00000488966 ATXN2Q99700 1313 aaKnown RBP11.5□□□□□ -0.57
YIPF3-207ENST00000488966 CEP295Q9C0D2 2601 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 A0A0A0MRY4 1105 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 SPAARA0A1B0GVQ0 90 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 TCRBV21S2A2A0A5A6 115 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 FRMD3A2A2Y4 597 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 SLC9A3R1O14745 358 aaPredicted RBP11.49□□□□□ -0.57
YIPF3-207ENST00000488966 TRIM66O15016 1216 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 APODP05090 189 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 ITPKAP23677 461 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 EIF2DP41214 584 aaKnown RBP11.49□□□□□ -0.57
YIPF3-207ENST00000488966 CACNA2D1P54289 1103 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 NOP14P78316 857 aaKnown RBP11.49□□□□□ -0.57
YIPF3-207ENST00000488966 KDSRQ06136 332 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 RESTQ13127 1097 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 ALCAMQ13740 583 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 MAPRE1Q15691 268 aaKnown RBP11.49□□□□□ -0.57
YIPF3-207ENST00000488966 DUOXA2Q1HG44 320 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 HSF5Q4G112 596 aaPredicted RBP11.49□□□□□ -0.57
YIPF3-207ENST00000488966 MDH1BQ5I0G3 518 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 EOGTQ5NDL2 527 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 LYSMD4Q5XG99 296 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 CBWD2Q8IUF1 395 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 GLIS3Q8NEA6 775 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 HMGB4Q8WW32 186 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 ZCCHC14Q8WYQ9 949 aaKnown RBP11.49□□□□□ -0.57
YIPF3-207ENST00000488966 C8orf48Q96LL4 319 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 MMS19Q96T76 1030 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 POLMQ9NP87 494 aaPredicted RBP11.49□□□□□ -0.57
YIPF3-207ENST00000488966 ARHGEF4Q9NR80 690 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 TMEM30AQ9NV96 361 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 PANK4Q9NVE7 773 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 EHD2Q9NZN4 543 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 BCCIPQ9P287 314 aaKnown RBP eCLIP11.49□□□□□ -0.57
YIPF3-207ENST00000488966 PILRBQ9UKJ0 227 aa11.49□□□□□ -0.57
YIPF3-207ENST00000488966 R3HCC1Q9Y3T6 440 aaKnown RBP11.49□□□□□ -0.57
YIPF3-207ENST00000488966 ZNF233A6NK53 670 aa11.48□□□□□ -0.57
YIPF3-207ENST00000488966 ADH1CP00326 375 aa11.48□□□□□ -0.57
YIPF3-207ENST00000488966 TNNC2P02585 160 aa11.48□□□□□ -0.57
YIPF3-207ENST00000488966 CFIP05156 583 aa11.48□□□□□ -0.57
YIPF3-207ENST00000488966 ADH5P11766 374 aa11.48□□□□□ -0.57
YIPF3-207ENST00000488966 GNL1P36915 607 aaPredicted RBP11.48□□□□□ -0.57
YIPF3-207ENST00000488966 GRIA2P42262 883 aa11.48□□□□□ -0.57
YIPF3-207ENST00000488966 PPP3CCP48454 512 aa11.48□□□□□ -0.57
YIPF3-207ENST00000488966 IFRD2Q12894 506 aaPredicted RBP11.48□□□□□ -0.57
YIPF3-207ENST00000488966 SEMA3BQ13214 749 aa11.48□□□□□ -0.57
YIPF3-207ENST00000488966 LY6G5CQ5SRR4 150 aa11.48□□□□□ -0.57
YIPF3-207ENST00000488966 TDRD10Q5VZ19 366 aaKnown RBP11.48□□□□□ -0.57
YIPF3-207ENST00000488966 SLC23A3Q6PIS1 610 aa11.48□□□□□ -0.57
YIPF3-207ENST00000488966 HS2ST1Q7LGA3 356 aa11.48□□□□□ -0.57
YIPF3-207ENST00000488966 PIP4P1Q86T03 277 aa11.48□□□□□ -0.57
YIPF3-207ENST00000488966 PGBD3Q8N328 593 aa11.48□□□□□ -0.57
YIPF3-207ENST00000488966 PHTF2Q8N3S3 785 aa11.48□□□□□ -0.57
YIPF3-207ENST00000488966 DEFB119Q8N690 84 aa11.48□□□□□ -0.57
YIPF3-207ENST00000488966 PANK2Q9BZ23 570 aa11.48□□□□□ -0.57
YIPF3-207ENST00000488966 ZNF518BQ9C0D4 1074 aa11.48□□□□□ -0.57
YIPF3-207ENST00000488966 DPEP3Q9H4B8 488 aa11.48□□□□□ -0.57
YIPF3-207ENST00000488966 SLC32A1Q9H598 525 aa11.48□□□□□ -0.57
YIPF3-207ENST00000488966 KLK13Q9UKR3 277 aa11.48□□□□□ -0.57
YIPF3-207ENST00000488966 SRPRBQ9Y5M8 271 aaKnown RBP11.48□□□□□ -0.57
YIPF3-207ENST00000488966 TCHHQ07283 1943 aa11.48□□□□□ -0.57
YIPF3-207ENST00000488966 LAMA1P25391 3075 aa11.48□□□□□ -0.57
YIPF3-207ENST00000488966 ZNF638Q14966 1978 aaKnown RBP11.47□□□□□ -0.57
YIPF3-207ENST00000488966 KIAA1549LQ6ZVL6 1849 aa11.47□□□□□ -0.57
YIPF3-207ENST00000488966 A0A087X0B3 334 aa11.47□□□□□ -0.57
YIPF3-207ENST00000488966 CLDN5O00501 218 aa11.47□□□□□ -0.57
YIPF3-207ENST00000488966 KIAA0391O15091 583 aaKnown RBP11.47□□□□□ -0.57
YIPF3-207ENST00000488966 COCHO43405 550 aa11.47□□□□□ -0.57
YIPF3-207ENST00000488966 CST3P01034 146 aaPredicted RBP11.47□□□□□ -0.57
YIPF3-207ENST00000488966 MBL2P11226 248 aaPredicted RBP11.47□□□□□ -0.57
YIPF3-207ENST00000488966 PTPN1P18031 435 aaKnown RBP11.47□□□□□ -0.57
YIPF3-207ENST00000488966 HOXD13P35453 343 aa11.47□□□□□ -0.57
YIPF3-207ENST00000488966 TNFRSF4P43489 277 aa11.47□□□□□ -0.57
YIPF3-207ENST00000488966 SIM1P81133 766 aaPredicted RBP11.47□□□□□ -0.57
YIPF3-207ENST00000488966 BYSLQ13895 437 aaKnown RBP11.47□□□□□ -0.57
YIPF3-207ENST00000488966 SURF1Q15526 300 aa11.47□□□□□ -0.57
YIPF3-207ENST00000488966 SPDYCQ5MJ68 293 aa11.47□□□□□ -0.57
YIPF3-207ENST00000488966 PEAR1Q5VY43 1037 aaPredicted RBP11.47□□□□□ -0.57
YIPF3-207ENST00000488966 CCDC73Q6ZRK6 1079 aa11.47□□□□□ -0.57
YIPF3-207ENST00000488966 TRAPPC11Q7Z392 1133 aa11.47□□□□□ -0.57
YIPF3-207ENST00000488966 WDR49Q8IV35 697 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms