RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 DSC3Q14574 896 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 LRRC14Q15048 493 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 TRIP13Q15645 432 aaPredicted RBP19.23■□□□□ 0.67
COL16A1-215ENST00000488897 CCNG2Q16589 344 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 SLC27A1Q6PCB7 646 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 C15orf39Q6ZRI6 1047 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 CEP128Q6ZU80 1094 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 GBP7Q8N8V2 638 aaPredicted RBP19.23■□□□□ 0.67
COL16A1-215ENST00000488897 CKAP2Q8WWK9 683 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 TRIM7Q9C029 511 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 INPP5FQ9Y2H2 1132 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 H0YCG3 227 aa19.22■□□□□ 0.67
COL16A1-215ENST00000488897 KLF1Q13351 362 aaPredicted RBP19.22■□□□□ 0.67
COL16A1-215ENST00000488897 TRIM72Q6ZMU5 477 aa19.22■□□□□ 0.67
COL16A1-215ENST00000488897 RHOT1Q8IXI2 618 aa19.22■□□□□ 0.67
COL16A1-215ENST00000488897 SEPT8Q92599 483 aa19.22■□□□□ 0.67
COL16A1-215ENST00000488897 MIOSQ9NXC5 875 aa19.22■□□□□ 0.67
COL16A1-215ENST00000488897 NINJ2Q9NZG7 142 aa19.22■□□□□ 0.67
COL16A1-215ENST00000488897 LGALS13Q9UHV8 139 aa19.22■□□□□ 0.67
COL16A1-215ENST00000488897 CXCL10P02778 98 aa19.22■□□□□ 0.67
COL16A1-215ENST00000488897 SF3A3Q12874 501 aaKnown RBP eCLIP19.22■□□□□ 0.67
COL16A1-215ENST00000488897 PAN2Q504Q3 1202 aaKnown RBP19.22■□□□□ 0.67
COL16A1-215ENST00000488897 FAM133BQ5BKY9 247 aaKnown RBP19.22■□□□□ 0.67
COL16A1-215ENST00000488897 ZPBP2Q6X784 338 aa19.22■□□□□ 0.67
COL16A1-215ENST00000488897 RELL1Q8IUW5 271 aa19.22■□□□□ 0.67
COL16A1-215ENST00000488897 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.22■□□□□ 0.67
COL16A1-215ENST00000488897 HERPUD2Q9BSE4 406 aa19.22■□□□□ 0.67
COL16A1-215ENST00000488897 MRPL47Q9HD33 250 aaKnown RBP19.22■□□□□ 0.67
COL16A1-215ENST00000488897 FGFR1OP2Q9NVK5 253 aa19.22■□□□□ 0.67
COL16A1-215ENST00000488897 NEU2Q9Y3R4 380 aa19.22■□□□□ 0.67
COL16A1-215ENST00000488897 PTPRJQ12913 1337 aa19.22■□□□□ 0.67
COL16A1-215ENST00000488897 UNC80Q8N2C7 3258 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 EXTL3O43909 919 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 RALAP11233 206 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 BRAFP15056 766 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 EZRP15311 586 aaKnown RBP19.21■□□□□ 0.67
COL16A1-215ENST00000488897 MLH1P40692 756 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 CLDN10P78369 228 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 MCL1Q07820 350 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 STAT4Q14765 748 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 NUGGCQ68CJ6 796 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 AGMOQ6ZNB7 445 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 ARHGEF18Q6ZSZ5 1173 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 MON1BQ7L1V2 547 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 CEP57Q86XR8 500 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 VCPIP1Q96JH7 1222 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 FOXP3Q9BZS1 431 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 GOLGA2P5Q9HBQ8 144 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 ABCF3Q9NUQ8 709 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 KCNG1Q9UIX4 513 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 ACTL7BQ9Y614 415 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 O00370 1275 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 CDH16O75309 829 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 CALCAP01258 141 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 CREB1P16220 341 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 RIPK1Q13546 671 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 TMEM240Q5SV17 173 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 PPP1R2P3Q6NXS1 205 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 SPRED2Q7Z698 418 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 KATNAL2Q8IYT4 538 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 ANKRD42Q8N9B4 389 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 ZNF516Q92618 1163 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 ZMAT2Q96NC0 199 aaKnown RBP19.21■□□□□ 0.67
COL16A1-215ENST00000488897 FNBP1Q96RU3 617 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 GAD1Q99259 594 aa19.21■□□□□ 0.67
COL16A1-215ENST00000488897 LBHD1Q9BQE6 289 aaPredicted RBP19.21■□□□□ 0.67
COL16A1-215ENST00000488897 R3HDM2Q9Y2K5 976 aaKnown RBP19.21■□□□□ 0.67
COL16A1-215ENST00000488897 RECQL4O94761 1208 aa19.2■□□□□ 0.66
COL16A1-215ENST00000488897 ATP6V1G2O95670 118 aa19.2■□□□□ 0.66
COL16A1-215ENST00000488897 POMCP01189 267 aa19.2■□□□□ 0.66
COL16A1-215ENST00000488897 PBX3P40426 434 aa19.2■□□□□ 0.66
COL16A1-215ENST00000488897 PSMD6Q15008 389 aa19.2■□□□□ 0.66
COL16A1-215ENST00000488897 OSBPL8Q9BZF1 889 aa19.2■□□□□ 0.66
COL16A1-215ENST00000488897 IL23AQ9NPF7 189 aa19.2■□□□□ 0.66
COL16A1-215ENST00000488897 DNAJC17Q9NVM6 304 aaKnown RBP19.2■□□□□ 0.66
COL16A1-215ENST00000488897 CTNNAL1Q9UBT7 734 aa19.2■□□□□ 0.66
COL16A1-215ENST00000488897 C9IYK1 514 aa19.2■□□□□ 0.66
COL16A1-215ENST00000488897 PIGRP01833 764 aa19.2■□□□□ 0.66
COL16A1-215ENST00000488897 CETN2P41208 172 aa19.2■□□□□ 0.66
COL16A1-215ENST00000488897 LMNB2Q03252 620 aa19.2■□□□□ 0.66
COL16A1-215ENST00000488897 SHHQ15465 462 aa19.2■□□□□ 0.66
COL16A1-215ENST00000488897 SLC10A6Q3KNW5 377 aa19.2■□□□□ 0.66
COL16A1-215ENST00000488897 ZACNQ401N2 412 aa19.2■□□□□ 0.66
COL16A1-215ENST00000488897 PHLDB2Q86SQ0 1253 aa19.2■□□□□ 0.66
COL16A1-215ENST00000488897 ADPGKQ9BRR6 497 aa19.2■□□□□ 0.66
COL16A1-215ENST00000488897 HEMGNQ9BXL5 484 aa19.2■□□□□ 0.66
COL16A1-215ENST00000488897 NOD2Q9HC29 1040 aa19.2■□□□□ 0.66
COL16A1-215ENST00000488897 RGS18Q9NS28 235 aa19.2■□□□□ 0.66
COL16A1-215ENST00000488897 NKIRAS1Q9NYS0 192 aa19.2■□□□□ 0.66
COL16A1-215ENST00000488897 ARL2BPQ9Y2Y0 163 aa19.2■□□□□ 0.66
COL16A1-215ENST00000488897 F8W810 466 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 UBOX5O94941 541 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 HLA-DRAP01903 254 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 MYOGP15173 224 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 TNNI1P19237 187 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 STX2P32856 288 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 VPS41P49754 854 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 IKBKEQ14164 716 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 GALNTL6Q49A17 601 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 PPP1R21Q6ZMI0 780 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms