RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 STK33Q9BYT3 514 aa20.47■□□□□ 0.87
CCM2-216ENST00000488727 PLEKHA4Q9H4M7 779 aa20.47■□□□□ 0.87
CCM2-216ENST00000488727 CYP4F11Q9HBI6 524 aa20.47■□□□□ 0.87
CCM2-216ENST00000488727 CLEC1BQ9P126 229 aa20.47■□□□□ 0.87
CCM2-216ENST00000488727 F8VZ95 297 aa20.46■□□□□ 0.87
CCM2-216ENST00000488727 MAP2K7O14733 419 aa20.46■□□□□ 0.87
CCM2-216ENST00000488727 SOAT2O75908 522 aa20.46■□□□□ 0.87
CCM2-216ENST00000488727 RHOXF2BP0C7M4 288 aa20.46■□□□□ 0.87
CCM2-216ENST00000488727 MCM3P25205 808 aa20.46■□□□□ 0.87
CCM2-216ENST00000488727 CFAP221Q4G0U5 840 aa20.46■□□□□ 0.87
CCM2-216ENST00000488727 SPATA2LQ8IUW3 424 aaPredicted RBP20.46■□□□□ 0.87
CCM2-216ENST00000488727 C2orf15Q8WU43 125 aaKnown RBP20.46■□□□□ 0.87
CCM2-216ENST00000488727 UBE2Q2Q8WVN8 375 aa20.46■□□□□ 0.87
CCM2-216ENST00000488727 HEXIM2Q96MH2 286 aaKnown RBP20.46■□□□□ 0.87
CCM2-216ENST00000488727 RHOXF2Q9BQY4 288 aa20.46■□□□□ 0.87
CCM2-216ENST00000488727 ZNF518BQ9C0D4 1074 aa20.46■□□□□ 0.87
CCM2-216ENST00000488727 ACP6Q9NPH0 428 aa20.46■□□□□ 0.87
CCM2-216ENST00000488727 SALL4Q9UJQ4 1053 aa20.46■□□□□ 0.87
CCM2-216ENST00000488727 A0A087X0T9 212 aa20.45■□□□□ 0.86
CCM2-216ENST00000488727 NCK2O43639 380 aa20.45■□□□□ 0.86
CCM2-216ENST00000488727 RFPL2O75678 378 aa20.45■□□□□ 0.86
CCM2-216ENST00000488727 C8AP07357 584 aa20.45■□□□□ 0.86
CCM2-216ENST00000488727 PAEPP09466 180 aa20.45■□□□□ 0.86
CCM2-216ENST00000488727 FAM228BP0C875 321 aa20.45■□□□□ 0.86
CCM2-216ENST00000488727 CYP2F1P24903 491 aa20.45■□□□□ 0.86
CCM2-216ENST00000488727 ELF1P32519 619 aa20.45■□□□□ 0.86
CCM2-216ENST00000488727 USP8P40818 1118 aa20.45■□□□□ 0.86
CCM2-216ENST00000488727 PPP1R26Q5T8A7 1209 aaPredicted RBP20.45■□□□□ 0.86
CCM2-216ENST00000488727 C4orf50Q6ZRC1 276 aa20.45■□□□□ 0.86
CCM2-216ENST00000488727 FAM71AQ8IYT1 594 aa20.45■□□□□ 0.86
CCM2-216ENST00000488727 MAFAQ8NHW3 353 aaPredicted RBP20.45■□□□□ 0.86
CCM2-216ENST00000488727 SLC2A14Q8TDB8 520 aa20.45■□□□□ 0.86
CCM2-216ENST00000488727 HDAC7Q8WUI4 952 aa20.45■□□□□ 0.86
CCM2-216ENST00000488727 TFAP2BQ92481 460 aa20.45■□□□□ 0.86
CCM2-216ENST00000488727 CYFIP2Q96F07 1278 aa20.45■□□□□ 0.86
CCM2-216ENST00000488727 FUBP3Q96I24 572 aaKnown RBP eCLIP20.45■□□□□ 0.86
CCM2-216ENST00000488727 ZSWIM1Q9BR11 485 aa20.45■□□□□ 0.86
CCM2-216ENST00000488727 ABCB6Q9NP58 842 aa20.45■□□□□ 0.86
CCM2-216ENST00000488727 TMEM30AQ9NV96 361 aa20.45■□□□□ 0.86
CCM2-216ENST00000488727 MAFFQ9ULX9 164 aa20.45■□□□□ 0.86
CCM2-216ENST00000488727 NENFQ9UMX5 172 aa20.45■□□□□ 0.86
CCM2-216ENST00000488727 INSL5Q9Y5Q6 135 aa20.45■□□□□ 0.86
CCM2-216ENST00000488727 PRRG1O14668 218 aa20.44■□□□□ 0.86
CCM2-216ENST00000488727 CYP26A1O43174 497 aa20.44■□□□□ 0.86
CCM2-216ENST00000488727 ZMYND10O75800 440 aa20.44■□□□□ 0.86
CCM2-216ENST00000488727 BDNFP23560 247 aa20.44■□□□□ 0.86
CCM2-216ENST00000488727 CACNA2D1P54289 1103 aa20.44■□□□□ 0.86
CCM2-216ENST00000488727 VSNL1P62760 191 aa20.44■□□□□ 0.86
CCM2-216ENST00000488727 LIN9Q5TKA1 542 aa20.44■□□□□ 0.86
CCM2-216ENST00000488727 EP400NLQ6ZTU2 488 aa20.44■□□□□ 0.86
CCM2-216ENST00000488727 FAM35AQ86V20 835 aa20.44■□□□□ 0.86
CCM2-216ENST00000488727 CREG2Q8IUH2 290 aa20.44■□□□□ 0.86
CCM2-216ENST00000488727 GPIHBP1Q8IV16 184 aa20.44■□□□□ 0.86
CCM2-216ENST00000488727 C12orf76Q8N812 135 aaPredicted RBP20.44■□□□□ 0.86
CCM2-216ENST00000488727 CAPZA3Q96KX2 299 aa20.44■□□□□ 0.86
CCM2-216ENST00000488727 OSBPL9Q96SU4 736 aa20.44■□□□□ 0.86
CCM2-216ENST00000488727 SEPT5Q99719 369 aaPredicted RBP20.44■□□□□ 0.86
CCM2-216ENST00000488727 HSFX1Q9UBD0 423 aa20.44■□□□□ 0.86
CCM2-216ENST00000488727 YIPF1Q9Y548 306 aa20.44■□□□□ 0.86
CCM2-216ENST00000488727 PDE2AO00408 941 aaPredicted RBP20.44■□□□□ 0.86
CCM2-216ENST00000488727 GFPT2O94808 682 aa20.44■□□□□ 0.86
CCM2-216ENST00000488727 HAPLN1P10915 354 aaPredicted RBP20.44■□□□□ 0.86
CCM2-216ENST00000488727 CD19P15391 556 aa20.44■□□□□ 0.86
CCM2-216ENST00000488727 FAM193AP78312 1265 aa20.44■□□□□ 0.86
CCM2-216ENST00000488727 SKIV2LQ15477 1246 aaKnown RBP20.44■□□□□ 0.86
CCM2-216ENST00000488727 MGAT5BQ3V5L5 792 aa20.44■□□□□ 0.86
CCM2-216ENST00000488727 ANKRD54Q6NXT1 300 aa20.44■□□□□ 0.86
CCM2-216ENST00000488727 SYCE2Q6PIF2 218 aa20.44■□□□□ 0.86
CCM2-216ENST00000488727 CCDC149Q6ZUS6 474 aa20.44■□□□□ 0.86
CCM2-216ENST00000488727 HNRNPABQ99729 332 aaKnown RBP20.44■□□□□ 0.86
CCM2-216ENST00000488727 C2orf16Q68DN1 1984 aa20.44■□□□□ 0.86
CCM2-216ENST00000488727 ZNF185O15231 689 aa20.43■□□□□ 0.86
CCM2-216ENST00000488727 ATF6P18850 670 aa20.43■□□□□ 0.86
CCM2-216ENST00000488727 BRD2P25440 801 aaKnown RBP20.43■□□□□ 0.86
CCM2-216ENST00000488727 ADORA2BP29275 332 aa20.43■□□□□ 0.86
CCM2-216ENST00000488727 GPR15P49685 360 aa20.43■□□□□ 0.86
CCM2-216ENST00000488727 PTK2Q05397 1052 aa20.43■□□□□ 0.86
CCM2-216ENST00000488727 SGO2Q562F6 1265 aa20.43■□□□□ 0.86
CCM2-216ENST00000488727 ZNF571Q7Z3V5 609 aaPredicted RBP20.43■□□□□ 0.86
CCM2-216ENST00000488727 FMNL3Q8IVF7 1028 aa20.43■□□□□ 0.86
CCM2-216ENST00000488727 MMGT1Q8N4V1 131 aa20.43■□□□□ 0.86
CCM2-216ENST00000488727 RUBCNQ92622 972 aa20.43■□□□□ 0.86
CCM2-216ENST00000488727 DNAI2Q9GZS0 605 aa20.43■□□□□ 0.86
CCM2-216ENST00000488727 DZANK1Q9NVP4 752 aa20.43■□□□□ 0.86
CCM2-216ENST00000488727 DPP7Q9UHL4 492 aa20.43■□□□□ 0.86
CCM2-216ENST00000488727 DOCK6Q96HP0 2047 aa20.43■□□□□ 0.86
CCM2-216ENST00000488727 SPTBN5Q9NRC6 3674 aaKnown RBP20.42■□□□□ 0.86
CCM2-216ENST00000488727 SRGAP2BP0DMP2 458 aa20.42■□□□□ 0.86
CCM2-216ENST00000488727 VDRP11473 427 aa20.42■□□□□ 0.86
CCM2-216ENST00000488727 FERP16591 822 aa20.42■□□□□ 0.86
CCM2-216ENST00000488727 MAGEA11P43364 429 aa20.42■□□□□ 0.86
CCM2-216ENST00000488727 ARID5AQ03989 594 aa20.42■□□□□ 0.86
CCM2-216ENST00000488727 PPM1LQ5SGD2 360 aa20.42■□□□□ 0.86
CCM2-216ENST00000488727 ARHGAP17Q68EM7 881 aa20.42■□□□□ 0.86
CCM2-216ENST00000488727 SMYD5Q6GMV2 418 aa20.42■□□□□ 0.86
CCM2-216ENST00000488727 MSLNLQ96KJ4 702 aa20.42■□□□□ 0.86
CCM2-216ENST00000488727 MED10Q9BTT4 135 aa20.42■□□□□ 0.86
CCM2-216ENST00000488727 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.42■□□□□ 0.86
CCM2-216ENST00000488727 TLR10Q9BXR5 811 aa20.42■□□□□ 0.86
CCM2-216ENST00000488727 SFXN1Q9H9B4 322 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms