RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 ASCL5Q7RTU5 278 aa18.83■□□□□ 0.6
ITGB1-215ENST00000488494 NUP93Q8N1F7 819 aa18.83■□□□□ 0.6
ITGB1-215ENST00000488494 CRYBG2Q8N1P7 616 aa18.83■□□□□ 0.6
ITGB1-215ENST00000488494 C12orf29Q8N999 325 aa18.83■□□□□ 0.6
ITGB1-215ENST00000488494 FBXL13Q8NEE6 735 aa18.83■□□□□ 0.6
ITGB1-215ENST00000488494 SH3RF2Q8TEC5 729 aa18.83■□□□□ 0.6
ITGB1-215ENST00000488494 NKD2Q969F2 451 aaPredicted RBP18.83■□□□□ 0.6
ITGB1-215ENST00000488494 SLITRK1Q96PX8 696 aa18.83■□□□□ 0.6
ITGB1-215ENST00000488494 CYP3A43Q9HB55 503 aa18.83■□□□□ 0.6
ITGB1-215ENST00000488494 RBM12Q9NTZ6 932 aaKnown RBP18.83■□□□□ 0.6
ITGB1-215ENST00000488494 ARHGAP26Q9UNA1 814 aa18.83■□□□□ 0.6
ITGB1-215ENST00000488494 F5P12259 2224 aa18.82■□□□□ 0.6
ITGB1-215ENST00000488494 BIN1O00499 593 aa18.82■□□□□ 0.6
ITGB1-215ENST00000488494 RTN3O95197 1032 aaPredicted RBP18.82■□□□□ 0.6
ITGB1-215ENST00000488494 ABL1P00519 1130 aa18.82■□□□□ 0.6
ITGB1-215ENST00000488494 CHRNB1P11230 501 aa18.82■□□□□ 0.6
ITGB1-215ENST00000488494 HDCP19113 662 aa18.82■□□□□ 0.6
ITGB1-215ENST00000488494 TRIM21P19474 475 aaKnown RBP18.82■□□□□ 0.6
ITGB1-215ENST00000488494 BMP6P22004 513 aa18.82■□□□□ 0.6
ITGB1-215ENST00000488494 PPP3CCP48454 512 aa18.82■□□□□ 0.6
ITGB1-215ENST00000488494 LRRC32Q14392 662 aa18.82■□□□□ 0.6
ITGB1-215ENST00000488494 PON2Q15165 354 aa18.82■□□□□ 0.6
ITGB1-215ENST00000488494 PDGFRLQ15198 375 aa18.82■□□□□ 0.6
ITGB1-215ENST00000488494 WDR44Q5JSH3 913 aa18.82■□□□□ 0.6
ITGB1-215ENST00000488494 KLHL10Q6JEL2 608 aa18.82■□□□□ 0.6
ITGB1-215ENST00000488494 SCAMP5Q8TAC9 235 aa18.82■□□□□ 0.6
ITGB1-215ENST00000488494 FBXO32Q969P5 355 aa18.82■□□□□ 0.6
ITGB1-215ENST00000488494 SMOQ99835 787 aa18.82■□□□□ 0.6
ITGB1-215ENST00000488494 NT5C1AQ9BXI3 368 aa18.82■□□□□ 0.6
ITGB1-215ENST00000488494 LMAN1LQ9HAT1 526 aa18.82■□□□□ 0.6
ITGB1-215ENST00000488494 PRMT8Q9NR22 394 aaPredicted RBP18.82■□□□□ 0.6
ITGB1-215ENST00000488494 CHMP5Q9NZZ3 219 aa18.82■□□□□ 0.6
ITGB1-215ENST00000488494 ARMCX3Q9UH62 379 aaPredicted RBP18.82■□□□□ 0.6
ITGB1-215ENST00000488494 FBXO4Q9UKT5 387 aa18.82■□□□□ 0.6
ITGB1-215ENST00000488494 CTNND2Q9UQB3 1225 aa18.82■□□□□ 0.6
ITGB1-215ENST00000488494 WNT6Q9Y6F9 365 aa18.82■□□□□ 0.6
ITGB1-215ENST00000488494 OTOL1A6NHN0 477 aaPredicted RBP18.81■□□□□ 0.6
ITGB1-215ENST00000488494 CILPO75339 1184 aa18.81■□□□□ 0.6
ITGB1-215ENST00000488494 OAS1P00973 400 aaKnown RBP18.81■□□□□ 0.6
ITGB1-215ENST00000488494 FAM200BP0CF97 657 aa18.81■□□□□ 0.6
ITGB1-215ENST00000488494 YWHAQP27348 245 aa18.81■□□□□ 0.6
ITGB1-215ENST00000488494 CSTF1Q05048 431 aaKnown RBP18.81■□□□□ 0.6
ITGB1-215ENST00000488494 RUNX3Q13761 415 aa18.81■□□□□ 0.6
ITGB1-215ENST00000488494 ZC3H14Q6PJT7 736 aaKnown RBP18.81■□□□□ 0.6
ITGB1-215ENST00000488494 PDZD8Q8NEN9 1154 aa18.81■□□□□ 0.6
ITGB1-215ENST00000488494 ZMIZ2Q8NF64 920 aa18.81■□□□□ 0.6
ITGB1-215ENST00000488494 JAKMIP2Q96AA8 810 aa18.81■□□□□ 0.6
ITGB1-215ENST00000488494 DHTKD1Q96HY7 919 aaPredicted RBP18.81■□□□□ 0.6
ITGB1-215ENST00000488494 ARID3AQ99856 593 aa18.81■□□□□ 0.6
ITGB1-215ENST00000488494 IER2Q9BTL4 223 aa18.81■□□□□ 0.6
ITGB1-215ENST00000488494 RAB20Q9NX57 234 aa18.81■□□□□ 0.6
ITGB1-215ENST00000488494 DUS2Q9NX74 493 aaKnown RBP18.81■□□□□ 0.6
ITGB1-215ENST00000488494 SMPD4Q9NXE4 827 aa18.81■□□□□ 0.6
ITGB1-215ENST00000488494 TNFRSF10BO14763 440 aa18.8■□□□□ 0.6
ITGB1-215ENST00000488494 BEST1O76090 585 aa18.8■□□□□ 0.6
ITGB1-215ENST00000488494 OLFM2O95897 454 aa18.8■□□□□ 0.6
ITGB1-215ENST00000488494 PFKLP17858 780 aa18.8■□□□□ 0.6
ITGB1-215ENST00000488494 PPP1R2P41236 205 aa18.8■□□□□ 0.6
ITGB1-215ENST00000488494 IFNAR2P48551 515 aa18.8■□□□□ 0.6
ITGB1-215ENST00000488494 MAP3K7CLP57077 242 aa18.8■□□□□ 0.6
ITGB1-215ENST00000488494 MORC3Q14149 939 aa18.8■□□□□ 0.6
ITGB1-215ENST00000488494 TSSK4Q6SA08 328 aa18.8■□□□□ 0.6
ITGB1-215ENST00000488494 Q6ZS52 159 aa18.8■□□□□ 0.6
ITGB1-215ENST00000488494 CPA6Q8N4T0 437 aa18.8■□□□□ 0.6
ITGB1-215ENST00000488494 WHAMMQ8TF30 809 aa18.8■□□□□ 0.6
ITGB1-215ENST00000488494 OSCP1Q8WVF1 389 aa18.8■□□□□ 0.6
ITGB1-215ENST00000488494 NELFBQ8WX92 580 aa18.8■□□□□ 0.6
ITGB1-215ENST00000488494 ATP2A3Q93084 1043 aa18.8■□□□□ 0.6
ITGB1-215ENST00000488494 SLC35C1Q96A29 364 aa18.8■□□□□ 0.6
ITGB1-215ENST00000488494 CHFRQ96EP1 664 aa18.8■□□□□ 0.6
ITGB1-215ENST00000488494 CSNK1G1Q9HCP0 422 aa18.8■□□□□ 0.6
ITGB1-215ENST00000488494 GMIPQ9P107 970 aa18.8■□□□□ 0.6
ITGB1-215ENST00000488494 CFAP54Q96N23 3096 aa18.8■□□□□ 0.6
ITGB1-215ENST00000488494 MYO16Q9Y6X6 1858 aa18.8■□□□□ 0.6
ITGB1-215ENST00000488494 LEFTY2O00292 366 aa18.79■□□□□ 0.6
ITGB1-215ENST00000488494 TCF3P15923 654 aa18.79■□□□□ 0.6
ITGB1-215ENST00000488494 ANP32AP39687 249 aaKnown RBP18.79■□□□□ 0.6
ITGB1-215ENST00000488494 UBE2HP62256 183 aa18.79■□□□□ 0.6
ITGB1-215ENST00000488494 SLC7A9P82251 487 aa18.79■□□□□ 0.6
ITGB1-215ENST00000488494 ZXDBP98169 803 aa18.79■□□□□ 0.6
ITGB1-215ENST00000488494 ZNF528Q3MIS6 628 aa18.79■□□□□ 0.6
ITGB1-215ENST00000488494 CCDC40Q4G0X9 1142 aa18.79■□□□□ 0.6
ITGB1-215ENST00000488494 ZNF394Q53GI3 561 aa18.79■□□□□ 0.6
ITGB1-215ENST00000488494 TTI2Q6NXR4 508 aa18.79■□□□□ 0.6
ITGB1-215ENST00000488494 GPRIN1Q7Z2K8 1008 aa18.79■□□□□ 0.6
ITGB1-215ENST00000488494 OVCA2Q8WZ82 227 aa18.79■□□□□ 0.6
ITGB1-215ENST00000488494 CEP63Q96MT8 703 aa18.79■□□□□ 0.6
ITGB1-215ENST00000488494 HNRNPABQ99729 332 aaKnown RBP18.79■□□□□ 0.6
ITGB1-215ENST00000488494 DUSP9Q99956 384 aaKnown RBP18.79■□□□□ 0.6
ITGB1-215ENST00000488494 RNF38Q9H0F5 515 aa18.79■□□□□ 0.6
ITGB1-215ENST00000488494 CISHQ9NSE2 258 aa18.79■□□□□ 0.6
ITGB1-215ENST00000488494 CPQQ9Y646 472 aa18.79■□□□□ 0.6
ITGB1-215ENST00000488494 PPP1R3GB7ZBB8 358 aa18.78■□□□□ 0.6
ITGB1-215ENST00000488494 SCAMP3O14828 347 aaKnown RBP18.78■□□□□ 0.6
ITGB1-215ENST00000488494 CCINQ13939 588 aa18.78■□□□□ 0.6
ITGB1-215ENST00000488494 GAS6Q14393 721 aa18.78■□□□□ 0.6
ITGB1-215ENST00000488494 EML3Q32P44 896 aa18.78■□□□□ 0.6
ITGB1-215ENST00000488494 DGKKQ5KSL6 1271 aa18.78■□□□□ 0.6
ITGB1-215ENST00000488494 NAIF1Q69YI7 327 aaPredicted RBP18.78■□□□□ 0.6
ITGB1-215ENST00000488494 CLEC20AQ6ZU45 233 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms