RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 ASS1P00966 412 aaKnown RBP20.54■□□□□ 0.88
CD55-209ENST00000488171 OAS1P00973 400 aaKnown RBP20.54■□□□□ 0.88
CD55-209ENST00000488171 NR2F2P24468 414 aa20.54■□□□□ 0.88
CD55-209ENST00000488171 HOXA6P31267 233 aa20.54■□□□□ 0.88
CD55-209ENST00000488171 VAMP7P51809 220 aa20.54■□□□□ 0.88
CD55-209ENST00000488171 SLC7A9P82251 487 aa20.54■□□□□ 0.88
CD55-209ENST00000488171 SPOPLQ6IQ16 392 aa20.54■□□□□ 0.88
CD55-209ENST00000488171 FAM35AQ86V20 835 aa20.54■□□□□ 0.88
CD55-209ENST00000488171 LONP2Q86WA8 852 aa20.54■□□□□ 0.88
CD55-209ENST00000488171 NUP93Q8N1F7 819 aa20.54■□□□□ 0.88
CD55-209ENST00000488171 TAF4BQ92750 862 aa20.54■□□□□ 0.88
CD55-209ENST00000488171 TNIP3Q96KP6 325 aa20.54■□□□□ 0.88
CD55-209ENST00000488171 P2RY13Q9BPV8 354 aa20.54■□□□□ 0.88
CD55-209ENST00000488171 HMGXB4Q9UGU5 601 aa20.54■□□□□ 0.88
CD55-209ENST00000488171 SPTBN4Q9H254 2564 aa20.54■□□□□ 0.88
CD55-209ENST00000488171 LEFTY2O00292 366 aa20.53■□□□□ 0.88
CD55-209ENST00000488171 HLA-DRAP01903 254 aa20.53■□□□□ 0.88
CD55-209ENST00000488171 P4HA1P13674 534 aa20.53■□□□□ 0.88
CD55-209ENST00000488171 DRD1P21728 446 aa20.53■□□□□ 0.88
CD55-209ENST00000488171 IFRD2Q12894 506 aaPredicted RBP20.53■□□□□ 0.88
CD55-209ENST00000488171 SRSF5Q13243 272 aaKnown RBP20.53■□□□□ 0.88
CD55-209ENST00000488171 LPAL2Q16609 132 aa20.53■□□□□ 0.88
CD55-209ENST00000488171 HEATR6Q6AI08 1181 aaKnown RBP20.53■□□□□ 0.88
CD55-209ENST00000488171 ACOT1Q86TX2 421 aa20.53■□□□□ 0.88
CD55-209ENST00000488171 FUKQ8N0W3 1084 aa20.53■□□□□ 0.88
CD55-209ENST00000488171 GUF1Q8N442 669 aaKnown RBP20.53■□□□□ 0.88
CD55-209ENST00000488171 EZH1Q92800 747 aaPredicted RBP20.53■□□□□ 0.88
CD55-209ENST00000488171 SECISBP2LQ93073 1101 aaKnown RBP20.53■□□□□ 0.88
CD55-209ENST00000488171 SLITRK1Q96PX8 696 aa20.53■□□□□ 0.88
CD55-209ENST00000488171 ATP8B3O60423 1300 aa20.52■□□□□ 0.88
CD55-209ENST00000488171 TNFRSF10BO14763 440 aa20.52■□□□□ 0.88
CD55-209ENST00000488171 RNF40O75150 1001 aa20.52■□□□□ 0.88
CD55-209ENST00000488171 ABL1P00519 1130 aa20.52■□□□□ 0.88
CD55-209ENST00000488171 TGM1P22735 817 aa20.52■□□□□ 0.88
CD55-209ENST00000488171 YWHAQP27348 245 aa20.52■□□□□ 0.88
CD55-209ENST00000488171 PIK3CAP42336 1068 aa20.52■□□□□ 0.88
CD55-209ENST00000488171 ASPAP45381 313 aa20.52■□□□□ 0.88
CD55-209ENST00000488171 ORC1Q13415 861 aa20.52■□□□□ 0.88
CD55-209ENST00000488171 ZCWPW2Q504Y3 356 aa20.52■□□□□ 0.88
CD55-209ENST00000488171 CRYBG2Q8N1P7 616 aa20.52■□□□□ 0.88
CD55-209ENST00000488171 SCAMP5Q8TAC9 235 aa20.52■□□□□ 0.88
CD55-209ENST00000488171 SMARCD1Q96GM5 515 aa20.52■□□□□ 0.88
CD55-209ENST00000488171 MED10Q9BTT4 135 aa20.52■□□□□ 0.88
CD55-209ENST00000488171 IL37Q9NZH6 218 aa20.52■□□□□ 0.88
CD55-209ENST00000488171 CPQQ9Y646 472 aa20.52■□□□□ 0.88
CD55-209ENST00000488171 RTN3O95197 1032 aaPredicted RBP20.51■□□□□ 0.87
CD55-209ENST00000488171 TRIM49P0CI25 452 aa20.51■□□□□ 0.87
CD55-209ENST00000488171 TRIM49CP0CI26 452 aa20.51■□□□□ 0.87
CD55-209ENST00000488171 CCDC130P13994 396 aa20.51■□□□□ 0.87
CD55-209ENST00000488171 CNR2P34972 360 aa20.51■□□□□ 0.87
CD55-209ENST00000488171 NDST1P52848 882 aa20.51■□□□□ 0.87
CD55-209ENST00000488171 PPP3CAQ08209 521 aa20.51■□□□□ 0.87
CD55-209ENST00000488171 LAIR1Q6GTX8 287 aa20.51■□□□□ 0.87
CD55-209ENST00000488171 PRR23BQ6ZRT6 265 aa20.51■□□□□ 0.87
CD55-209ENST00000488171 INTS8Q75QN2 995 aaKnown RBP20.51■□□□□ 0.87
CD55-209ENST00000488171 WDR5BQ86VZ2 330 aa20.51■□□□□ 0.87
CD55-209ENST00000488171 UNC93AQ86WB7 457 aa20.51■□□□□ 0.87
CD55-209ENST00000488171 ZMIZ2Q8NF64 920 aa20.51■□□□□ 0.87
CD55-209ENST00000488171 CD101Q93033 1021 aa20.51■□□□□ 0.87
CD55-209ENST00000488171 FBXO32Q969P5 355 aa20.51■□□□□ 0.87
CD55-209ENST00000488171 DMAP1Q9NPF5 467 aaPredicted RBP20.51■□□□□ 0.87
CD55-209ENST00000488171 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.51■□□□□ 0.875e-7■■■■■ 56
CD55-209ENST00000488171 KRT82Q9NSB4 513 aa20.51■□□□□ 0.87
CD55-209ENST00000488171 SMPD4Q9NXE4 827 aa20.51■□□□□ 0.87
CD55-209ENST00000488171 RAB23Q9ULC3 237 aa20.51■□□□□ 0.87
CD55-209ENST00000488171 MYO16Q9Y6X6 1858 aa20.51■□□□□ 0.87
CD55-209ENST00000488171 KIAA1549LQ6ZVL6 1849 aa20.5■□□□□ 0.87
CD55-209ENST00000488171 ATG13O75143 517 aa20.5■□□□□ 0.87
CD55-209ENST00000488171 GCLMP48507 274 aa20.5■□□□□ 0.87
CD55-209ENST00000488171 SLC5A3P53794 718 aa20.5■□□□□ 0.87
CD55-209ENST00000488171 SIM2Q14190 667 aaPredicted RBP20.5■□□□□ 0.87
CD55-209ENST00000488171 GAB4Q2WGN9 574 aa20.5■□□□□ 0.87
CD55-209ENST00000488171 FAM186BQ8IYM0 893 aa20.5■□□□□ 0.87
CD55-209ENST00000488171 GPR161Q8N6U8 529 aaKnown RBP20.5■□□□□ 0.87
CD55-209ENST00000488171 KIAA1958Q8N8K9 716 aa20.5■□□□□ 0.87
CD55-209ENST00000488171 PDZD8Q8NEN9 1154 aa20.5■□□□□ 0.87
CD55-209ENST00000488171 OVCA2Q8WZ82 227 aa20.5■□□□□ 0.87
CD55-209ENST00000488171 SMOQ99835 787 aa20.5■□□□□ 0.87
CD55-209ENST00000488171 APOBEC3GQ9HC16 384 aaKnown RBP20.5■□□□□ 0.87
CD55-209ENST00000488171 PARD6AQ9NPB6 346 aa20.5■□□□□ 0.87
CD55-209ENST00000488171 POLR3BQ9NW08 1133 aaPredicted RBP20.5■□□□□ 0.87
CD55-209ENST00000488171 GMEB2Q9UKD1 530 aa20.5■□□□□ 0.87
CD55-209ENST00000488171 AP1G2O75843 785 aa20.49■□□□□ 0.87
CD55-209ENST00000488171 BEST1O76090 585 aa20.49■□□□□ 0.87
CD55-209ENST00000488171 NFATC1O95644 943 aa20.49■□□□□ 0.87
CD55-209ENST00000488171 RPL13P26373 211 aaKnown RBP20.49■□□□□ 0.87
CD55-209ENST00000488171 PSMC2P35998 433 aaKnown RBP20.49■□□□□ 0.87
CD55-209ENST00000488171 MCCD1P59942 119 aaPredicted RBP20.49■□□□□ 0.87
CD55-209ENST00000488171 ENPEPQ07075 957 aa20.49■□□□□ 0.87
CD55-209ENST00000488171 NR1H3Q13133 447 aa20.49■□□□□ 0.87
CD55-209ENST00000488171 ADAM9Q13443 819 aa20.49■□□□□ 0.87
CD55-209ENST00000488171 FBXO43Q4G163 708 aa20.49■□□□□ 0.87
CD55-209ENST00000488171 SNX30Q5VWJ9 437 aa20.49■□□□□ 0.87
CD55-209ENST00000488171 ERMP1Q7Z2K6 904 aa20.49■□□□□ 0.87
CD55-209ENST00000488171 FILIP1Q7Z7B0 1213 aa20.49■□□□□ 0.87
CD55-209ENST00000488171 SMYD4Q8IYR2 804 aaPredicted RBP20.49■□□□□ 0.87
CD55-209ENST00000488171 FMR1NBQ8N0W7 255 aaPredicted RBP20.49■□□□□ 0.87
CD55-209ENST00000488171 C12orf29Q8N999 325 aa20.49■□□□□ 0.87
CD55-209ENST00000488171 SLC2A14Q8TDB8 520 aa20.49■□□□□ 0.87
CD55-209ENST00000488171 TAS1R2Q8TE23 839 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms