RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 ELOVL4Q9GZR5 314 aa12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 SCAND2PQ9GZW5 306 aaPredicted RBP12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 EPC1Q9H2F5 836 aa12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 CHORDC1Q9UHD1 332 aaPredicted RBP12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 RAB23Q9ULC3 237 aa12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 FAM237AA0A1B0GTK4 181 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 A0A1W2PQ27 194 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 A0A1W2PQ64 194 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 A0A1W2PQD8 194 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 LEFTY2O00292 366 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 TRDMT1O14717 391 aaKnown RBP12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 HRO43593 1189 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 RHOBTB3O94955 611 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 MYL1P05976 194 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 FAM163BP0C2L3 166 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 MBL2P11226 248 aaPredicted RBP12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 CCDC130P13994 396 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 YWHAQP27348 245 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 PIK3CAP42336 1068 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 GCLMP48507 274 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 VAMP7P51809 220 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 CLDN10P78369 228 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 AMPD2Q01433 879 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 SIM2Q14190 667 aaPredicted RBP12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 SGSM1Q2NKQ1 1148 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 EML3Q32P44 896 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 C1orf220Q5T0J3 134 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 PAQR9Q6ZVX9 377 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 FAM35AQ86V20 835 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 NUP93Q8N1F7 819 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 SCAMP5Q8TAC9 235 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 TMC2Q8TDI7 906 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 FBXO32Q969P5 355 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 JAKMIP2Q96AA8 810 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 SLITRK1Q96PX8 696 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 P2RY13Q9BPV8 354 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 TTLL2Q9BWV7 592 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 VRTNQ9H8Y1 702 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 FAM49BQ9NUQ9 324 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 HMGXB4Q9UGU5 601 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 GMEB2Q9UKD1 530 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 USP18Q9UMW8 372 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 ARHGAP26Q9UNA1 814 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 TRAF3IP3Q9Y228 551 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 CPQQ9Y646 472 aa12.01□□□□□ -0.49
NIPAL3-207ENST00000488155 ANTXRLA6NF34 631 aa12□□□□□ -0.49
NIPAL3-207ENST00000488155 AP1G2O75843 785 aa12□□□□□ -0.49
NIPAL3-207ENST00000488155 AKAP3O75969 853 aa12□□□□□ -0.49
NIPAL3-207ENST00000488155 BEST1O76090 585 aa12□□□□□ -0.49
NIPAL3-207ENST00000488155 KIF20AO95235 890 aa12□□□□□ -0.49
NIPAL3-207ENST00000488155 P4HA1P13674 534 aa12□□□□□ -0.49
NIPAL3-207ENST00000488155 ADORA2BP29275 332 aa12□□□□□ -0.49
NIPAL3-207ENST00000488155 NDST1P52848 882 aa12□□□□□ -0.49
NIPAL3-207ENST00000488155 NOP14P78316 857 aaKnown RBP12□□□□□ -0.49
NIPAL3-207ENST00000488155 PPP3CAQ08209 521 aa12□□□□□ -0.49
NIPAL3-207ENST00000488155 SPEM2Q0P670 501 aa12□□□□□ -0.49
NIPAL3-207ENST00000488155 ADAM9Q13443 819 aa12□□□□□ -0.49
NIPAL3-207ENST00000488155 PNOCQ13519 176 aa12□□□□□ -0.49
NIPAL3-207ENST00000488155 FILIP1Q7Z7B0 1213 aa12□□□□□ -0.49
NIPAL3-207ENST00000488155 FAM186BQ8IYM0 893 aa12□□□□□ -0.49
NIPAL3-207ENST00000488155 FUKQ8N0W3 1084 aa12□□□□□ -0.49
NIPAL3-207ENST00000488155 SYNPOQ8N3V7 929 aa12□□□□□ -0.49
NIPAL3-207ENST00000488155 C12orf29Q8N999 325 aa12□□□□□ -0.49
NIPAL3-207ENST00000488155 SLC2A14Q8TDB8 520 aa12□□□□□ -0.49
NIPAL3-207ENST00000488155 ERCC4Q92889 916 aaPredicted RBP12□□□□□ -0.49
NIPAL3-207ENST00000488155 CD101Q93033 1021 aa12□□□□□ -0.49
NIPAL3-207ENST00000488155 SECISBP2LQ93073 1101 aaKnown RBP12□□□□□ -0.49
NIPAL3-207ENST00000488155 ATP2A3Q93084 1043 aa12□□□□□ -0.49
NIPAL3-207ENST00000488155 KRT82Q9NSB4 513 aa12□□□□□ -0.49
NIPAL3-207ENST00000488155 EHD2Q9NZN4 543 aa12□□□□□ -0.49
NIPAL3-207ENST00000488155 SLC8A2Q9UPR5 921 aa12□□□□□ -0.49
NIPAL3-207ENST00000488155 ATP8B3O60423 1300 aa12□□□□□ -0.49
NIPAL3-207ENST00000488155 RTN3O95197 1032 aaPredicted RBP11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 NFATC1O95644 943 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 ASS1P00966 412 aaKnown RBP11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 OAS1P00973 400 aaKnown RBP11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 KRT13P13646 458 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 CD58P19256 250 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 DRD1P21728 446 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 ASPAP45381 313 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 PDE6CP51160 858 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 SLC5A3P53794 718 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 SEC13P55735 322 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 MAP3K7CLP57077 242 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 NR1H3Q13133 447 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 RSPO4Q2I0M5 234 aaPredicted RBP11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 CEP68Q76N32 757 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 LONP2Q86WA8 852 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 ZMIZ2Q8NF64 920 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 RPLP0P6Q8NHW5 317 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 TAS1R2Q8TE23 839 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 EZH1Q92800 747 aaPredicted RBP11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 SMARCD1Q96GM5 515 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 TNIP3Q96KP6 325 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 CEP295NLQ96MC4 621 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 HHIPQ96QV1 700 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 TWNKQ96RR1 684 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 SMOQ99835 787 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 CCSER2Q9H7U1 834 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 APOBEC3GQ9HC16 384 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms