RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 PDGFBP01127 241 aaPredicted RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 CHGBP05060 677 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 EDN1P05305 212 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 SERPINF2P08697 491 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 SFTPCP11686 197 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 ARF4P18085 180 aaPredicted RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 EPHA1P21709 976 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 GLRA2P23416 452 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 MARK3P27448 753 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 POLR2BP30876 1174 aaKnown RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 ZNF131P52739 623 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 RHDQ02161 417 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 HYAL2Q12891 473 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 INPP5AQ14642 412 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 ZNF77Q15935 545 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 UBE2SQ16763 222 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 USP39Q53GS9 565 aaKnown RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 N4BP2L1Q5TBK1 243 aaPredicted RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 EMC10Q5UCC4 262 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 VITQ6UXI7 678 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 REC114Q7Z4M0 266 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 VN1R5Q7Z5H4 357 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 TMCO2Q7Z6W1 182 aaPredicted RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 LSRQ86X29 649 aaPredicted RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 SULF2Q8IWU5 870 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 FLCNQ8NFG4 579 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 WDR48Q8TAF3 677 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 BPIFB1Q8TDL5 484 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 RIN2Q8WYP3 895 aaPredicted RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 RILPL2Q969X0 211 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 GAL3ST3Q96A11 431 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 FAM131CQ96AQ9 280 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 ZNF837Q96EG3 531 aaPredicted RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 CEP170P1Q96L14 293 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 MMTAG2Q9BU76 263 aaKnown RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 SMG9Q9H0W8 520 aaKnown RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 SLKQ9H2G2 1235 aaPredicted RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 MAGEF1Q9HAY2 307 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 KIAA1586Q9HCI6 787 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 VAT1LQ9HCJ6 419 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 NCKIPSDQ9NZQ3 722 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 USP18Q9UMW8 372 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 SLC8A2Q9UPR5 921 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 APOBEC2Q9Y235 224 aaKnown RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 KIF3AQ9Y496 699 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 PTPRDP23468 1912 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 EVPLQ92817 2033 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 CCDC194A0A1B0GVG4 234 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 A0A1W2PQD8 194 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 E2F8A0AVK6 867 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 FAM92AA1XBS5 289 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 FAM221AA4D161 298 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 MAPK13O15264 365 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 TOM1L1O75674 476 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 GJB3O75712 270 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 PRKCBP05771 671 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 FAM157BP0CG42 384 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 HAPLN1P10915 354 aaPredicted RBP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 BMP6P22004 513 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 KRT2P35908 639 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 HARS2P49590 506 aaKnown RBP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 IGBP1P78318 339 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 HMGN5P82970 282 aaKnown RBP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 ROR1Q01973 937 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 GRIN1Q05586 938 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 MTAPQ13126 283 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 PRPF4BQ13523 1007 aaKnown RBP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 SUZ12Q15022 739 aaKnown RBP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 CLUL1Q15846 466 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 MEA1Q16626 185 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 UGCGQ16739 394 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 DDR2Q16832 855 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 TMEM266Q2M3C6 531 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 SV2CQ496J9 727 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 CFAP221Q4G0U5 840 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 PRR16Q569H4 304 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 SPATA1Q5VX52 437 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 LLGL2Q6P1M3 1020 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 BLOC1S2Q6QNY1 142 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 CCNI2Q6ZMN8 369 aaPredicted RBP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 GET4Q7L5D6 327 aaPredicted RBP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 TADA2BQ86TJ2 420 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 NLRP8Q86W28 1048 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 SYT12Q8IV01 421 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 THEM5Q8N1Q8 247 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 METTL13Q8N6R0 699 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 KCNG4Q8TDN1 519 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 WFIKKN2Q8TEU8 576 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 OSCP1Q8WVF1 389 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 DNASE2BQ8WZ79 361 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 WDR89Q96FK6 387 aaPredicted RBP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 C8orf48Q96LL4 319 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 ACO2Q99798 780 aaKnown RBP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 GABRG3Q99928 467 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 LXNQ9BS40 222 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 LRRC27Q9C0I9 530 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 ERVMER34-1Q9H9K5 563 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 LMAN1LQ9HAT1 526 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 SLC6A14Q9UN76 642 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 YIPF1Q9Y548 306 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms