RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 SOCS4Q8WXH5 440 aa4.9□□□□□ -1.63
TTC3-220ENST00000487711 IQCDQ96DY2 449 aa4.9□□□□□ -1.63
TTC3-220ENST00000487711 DPCDQ9BVM2 203 aaPredicted RBP4.9□□□□□ -1.63
TTC3-220ENST00000487711 NAA15Q9BXJ9 866 aaKnown RBP4.9□□□□□ -1.63
TTC3-220ENST00000487711 TRIM5Q9C035 493 aa4.9□□□□□ -1.63
TTC3-220ENST00000487711 ARNT2Q9HBZ2 717 aa4.9□□□□□ -1.63
TTC3-220ENST00000487711 SEMA4GQ9NTN9 838 aa4.9□□□□□ -1.63
TTC3-220ENST00000487711 SPATA31A6Q5VVP1 1343 aa4.9□□□□□ -1.63
TTC3-220ENST00000487711 ANO9A1A5B4 782 aa4.89□□□□□ -1.63
TTC3-220ENST00000487711 AQP7P3A6NL99 342 aa4.89□□□□□ -1.63
TTC3-220ENST00000487711 ENGP17813 658 aa4.89□□□□□ -1.63
TTC3-220ENST00000487711 BTF3P20290 206 aaKnown RBP4.89□□□□□ -1.63
TTC3-220ENST00000487711 DRD4P21917 467 aa4.89□□□□□ -1.63
TTC3-220ENST00000487711 MTHFSP49914 203 aa4.89□□□□□ -1.63
TTC3-220ENST00000487711 BCAT1P54687 386 aa4.89□□□□□ -1.63
TTC3-220ENST00000487711 ELLP55199 621 aaPredicted RBP4.89□□□□□ -1.63
TTC3-220ENST00000487711 EEFSECP57772 596 aaKnown RBP4.89□□□□□ -1.63
TTC3-220ENST00000487711 NANOS3P60323 173 aaKnown RBP4.89□□□□□ -1.63
TTC3-220ENST00000487711 HTRA4P83105 476 aaPredicted RBP4.89□□□□□ -1.63
TTC3-220ENST00000487711 ZNF750Q32MQ0 723 aa4.89□□□□□ -1.63
TTC3-220ENST00000487711 KLHDC7AQ5VTJ3 777 aa4.89□□□□□ -1.63
TTC3-220ENST00000487711 FCRL6Q6DN72 434 aa4.89□□□□□ -1.63
TTC3-220ENST00000487711 CCSAPQ6IQ19 270 aaPredicted RBP4.89□□□□□ -1.63
TTC3-220ENST00000487711 ANKRD16Q6P6B7 361 aa4.89□□□□□ -1.63
TTC3-220ENST00000487711 RD3Q7Z3Z2 195 aa4.89□□□□□ -1.63
TTC3-220ENST00000487711 WDR53Q7Z5U6 358 aaPredicted RBP4.89□□□□□ -1.63
TTC3-220ENST00000487711 C11orf96Q7Z7L8 435 aa4.89□□□□□ -1.63
TTC3-220ENST00000487711 AMIGO2Q86SJ2 522 aa4.89□□□□□ -1.63
TTC3-220ENST00000487711 TIMP4Q99727 224 aa4.89□□□□□ -1.63
TTC3-220ENST00000487711 R3HDMLQ9H3Y0 253 aa4.89□□□□□ -1.63
TTC3-220ENST00000487711 PRDM13Q9H4Q3 707 aa4.89□□□□□ -1.63
TTC3-220ENST00000487711 DLL3Q9NYJ7 618 aa4.89□□□□□ -1.63
TTC3-220ENST00000487711 USP22Q9UPT9 525 aa4.89□□□□□ -1.63
TTC3-220ENST00000487711 COL11A2P13942 1736 aaPredicted RBP4.89□□□□□ -1.63
TTC3-220ENST00000487711 FER1L4A9Z1Z3 1794 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 H0YIZ8 118 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 PSMD9O00233 223 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 CD3EAPO15446 510 aaKnown RBP4.88□□□□□ -1.63
TTC3-220ENST00000487711 IGLV2-14P01704 120 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 DLDP09622 509 aaKnown RBP4.88□□□□□ -1.63
TTC3-220ENST00000487711 WT1P19544 449 aaPredicted RBP4.88□□□□□ -1.63
TTC3-220ENST00000487711 EPHA3P29320 983 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 STT3AP46977 705 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 CASP5P51878 434 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 SOX10P56693 466 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 PICALMQ13492 652 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 LONRF1Q17RB8 773 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 PCID2Q5JVF3 399 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 RRAGBQ5VZM2 374 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 PLAG1Q6DJT9 500 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 IL31Q6EBC2 164 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 DPY19L3Q6ZPD9 716 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 PARS2Q7L3T8 475 aaKnown RBP4.88□□□□□ -1.63
TTC3-220ENST00000487711 SLC29A4Q7RTT9 530 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 ATP11CQ8NB49 1132 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 FANCBQ8NB91 859 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 RP9Q8TA86 221 aaKnown RBP4.88□□□□□ -1.63
TTC3-220ENST00000487711 PARD3BQ8TEW8 1205 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 NELL1Q92832 810 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 SARAFQ96BY9 339 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 ZBTB45Q96K62 511 aaPredicted RBP4.88□□□□□ -1.63
TTC3-220ENST00000487711 FAM83DQ9H4H8 585 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 DUSP22Q9NRW4 184 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 DKK4Q9UBT3 224 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 RGS17Q9UGC6 210 aaPredicted RBP4.88□□□□□ -1.63
TTC3-220ENST00000487711 PADI4Q9UM07 663 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 DRG1Q9Y295 367 aaKnown RBP4.88□□□□□ -1.63
TTC3-220ENST00000487711 WNT6Q9Y6F9 365 aa4.88□□□□□ -1.63
TTC3-220ENST00000487711 PRKCBP05771 671 aa4.87□□□□□ -1.63
TTC3-220ENST00000487711 HNRNPCP07910 306 aaKnown RBP eCLIP4.87□□□□□ -1.63
TTC3-220ENST00000487711 NPSP0C0P6 89 aa4.87□□□□□ -1.63
TTC3-220ENST00000487711 HGFP14210 728 aa4.87□□□□□ -1.63
TTC3-220ENST00000487711 TSHRP16473 764 aa4.87□□□□□ -1.63
TTC3-220ENST00000487711 ITPKBP27987 946 aa4.87□□□□□ -1.63
TTC3-220ENST00000487711 UQCRC1P31930 480 aa4.87□□□□□ -1.63
TTC3-220ENST00000487711 NEK3P51956 506 aa4.87□□□□□ -1.63
TTC3-220ENST00000487711 PGDP52209 483 aa4.87□□□□□ -1.63
TTC3-220ENST00000487711 KCNAB1Q14722 419 aa4.87□□□□□ -1.63
TTC3-220ENST00000487711 TBC1D25Q3MII6 688 aa4.87□□□□□ -1.63
TTC3-220ENST00000487711 AARS2Q5JTZ9 985 aaKnown RBP4.87□□□□□ -1.63
TTC3-220ENST00000487711 Q6ZWC4 215 aa4.87□□□□□ -1.63
TTC3-220ENST00000487711 NOL8Q76FK4 1167 aaKnown RBP4.87□□□□□ -1.63
TTC3-220ENST00000487711 ZNF804AQ7Z570 1209 aa4.87□□□□□ -1.63
TTC3-220ENST00000487711 FAM98AQ8NCA5 519 aaKnown RBP4.87□□□□□ -1.63
TTC3-220ENST00000487711 ZNF384Q8TF68 577 aa4.87□□□□□ -1.63
TTC3-220ENST00000487711 LRRC46Q96FV0 321 aa4.87□□□□□ -1.63
TTC3-220ENST00000487711 STARD7Q9NQZ5 370 aa4.87□□□□□ -1.63
TTC3-220ENST00000487711 ARPP21Q9UBL0 812 aaPredicted RBP4.87□□□□□ -1.63
TTC3-220ENST00000487711 ADAMTS5Q9UNA0 930 aa4.87□□□□□ -1.63
TTC3-220ENST00000487711 AP4M1O00189 453 aa4.86□□□□□ -1.63
TTC3-220ENST00000487711 APOL1O14791 398 aa4.86□□□□□ -1.63
TTC3-220ENST00000487711 PLIN1O60240 522 aa4.86□□□□□ -1.63
TTC3-220ENST00000487711 C1QL1O75973 258 aa4.86□□□□□ -1.63
TTC3-220ENST00000487711 A1BGP04217 495 aa4.86□□□□□ -1.63
TTC3-220ENST00000487711 FGFR2P21802 821 aa4.86□□□□□ -1.63
TTC3-220ENST00000487711 CTGFP29279 349 aa4.86□□□□□ -1.63
TTC3-220ENST00000487711 GATMP50440 423 aa4.86□□□□□ -1.63
TTC3-220ENST00000487711 E2F1Q01094 437 aa4.86□□□□□ -1.63
TTC3-220ENST00000487711 L1TD1Q5T7N2 865 aaKnown RBP4.86□□□□□ -1.63
TTC3-220ENST00000487711 CEP85Q6P2H3 762 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms