RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 YWHAQP27348 245 aa14.05□□□□□ -0.16
COL4A6-207ENST00000487645 CDH5P33151 784 aaPredicted RBP14.05□□□□□ -0.16
COL4A6-207ENST00000487645 PPP3CCP48454 512 aa14.05□□□□□ -0.16
COL4A6-207ENST00000487645 RPL34P49207 117 aaKnown RBP14.05□□□□□ -0.16
COL4A6-207ENST00000487645 SNX16P57768 344 aa14.05□□□□□ -0.16
COL4A6-207ENST00000487645 CBX2Q14781 532 aaPredicted RBP14.05□□□□□ -0.16
COL4A6-207ENST00000487645 CLUL1Q15846 466 aa14.05□□□□□ -0.16
COL4A6-207ENST00000487645 TSR1Q2NL82 804 aaKnown RBP14.05□□□□□ -0.16
COL4A6-207ENST00000487645 RAB41Q5JT25 222 aa14.05□□□□□ -0.16
COL4A6-207ENST00000487645 TRIM72Q6ZMU5 477 aa14.05□□□□□ -0.16
COL4A6-207ENST00000487645 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.05□□□□□ -0.16
COL4A6-207ENST00000487645 PIGZQ86VD9 579 aa14.05□□□□□ -0.16
COL4A6-207ENST00000487645 TMC8Q8IU68 726 aa14.05□□□□□ -0.16
COL4A6-207ENST00000487645 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.05□□□□□ -0.16
COL4A6-207ENST00000487645 SECISBP2LQ93073 1101 aaKnown RBP14.05□□□□□ -0.16
COL4A6-207ENST00000487645 AGPAT1Q99943 283 aa14.05□□□□□ -0.16
COL4A6-207ENST00000487645 PDCL3Q9H2J4 239 aa14.05□□□□□ -0.16
COL4A6-207ENST00000487645 HCFC1R1Q9NWW0 138 aa14.05□□□□□ -0.16
COL4A6-207ENST00000487645 USP15Q9Y4E8 981 aaPredicted RBP14.05□□□□□ -0.16
COL4A6-207ENST00000487645 MYO16Q9Y6X6 1858 aa14.05□□□□□ -0.16
COL4A6-207ENST00000487645 DOCK8Q8NF50 2099 aa14.05□□□□□ -0.16
COL4A6-207ENST00000487645 GRXCR2A6NFK2 248 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 AKR1B15C9JRZ8 316 aaPredicted RBP14.04□□□□□ -0.16
COL4A6-207ENST00000487645 TULP2O00295 520 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 SERPING1P05155 500 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 MMEP08473 750 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 CFHP08603 1231 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 SSTR3P32745 418 aaPredicted RBP14.04□□□□□ -0.16
COL4A6-207ENST00000487645 ACADSBP45954 432 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 KIF11P52732 1056 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 SLC5A3P53794 718 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 FMO1Q01740 532 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 KLHL30Q0D2K2 578 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 MTMR3Q13615 1198 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 PMF1Q6P1K2 205 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 PDZD4Q76G19 769 aaPredicted RBP14.04□□□□□ -0.16
COL4A6-207ENST00000487645 CNGA4Q8IV77 575 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 HS6ST3Q8IZP7 471 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 SCML4Q8N228 414 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 WDTC1Q8N5D0 677 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 TMEM35BQ8NCS4 154 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 SCAMP5Q8TAC9 235 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 FEZF2Q8TBJ5 459 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 ATXN2LQ8WWM7 1075 aaKnown RBP14.04□□□□□ -0.16
COL4A6-207ENST00000487645 OVCA2Q8WZ82 227 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 NOX5Q96PH1 765 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 DNAJC7Q99615 494 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 SLC4A5Q9BY07 1137 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 LRRC4Q9HBW1 653 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 PRDM6Q9NQX0 595 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 THEGQ9P2T0 379 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 IMPACTQ9P2X3 320 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 MAGED2Q9UNF1 606 aaPredicted RBP14.04□□□□□ -0.16
COL4A6-207ENST00000487645 SCML2Q9UQR0 700 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 USP3Q9Y6I4 520 aa14.04□□□□□ -0.16
COL4A6-207ENST00000487645 SOBPA7XYQ1 873 aa14.03□□□□□ -0.16
COL4A6-207ENST00000487645 F11P03951 625 aa14.03□□□□□ -0.16
COL4A6-207ENST00000487645 MYL4P12829 197 aa14.03□□□□□ -0.16
COL4A6-207ENST00000487645 TNFAIP3P21580 790 aa14.03□□□□□ -0.16
COL4A6-207ENST00000487645 FSHRP23945 695 aa14.03□□□□□ -0.16
COL4A6-207ENST00000487645 CDC25CP30307 473 aa14.03□□□□□ -0.16
COL4A6-207ENST00000487645 MRE11P49959 708 aa14.03□□□□□ -0.16
COL4A6-207ENST00000487645 USP46P62068 366 aa14.03□□□□□ -0.16
COL4A6-207ENST00000487645 NTHL1P78549 312 aa14.03□□□□□ -0.16
COL4A6-207ENST00000487645 SMAD2Q15796 467 aaKnown RBP14.03□□□□□ -0.16
COL4A6-207ENST00000487645 PRSS36Q5K4E3 855 aa14.03□□□□□ -0.16
COL4A6-207ENST00000487645 TAF3Q5VWG9 929 aa14.03□□□□□ -0.16
COL4A6-207ENST00000487645 E4F1Q66K89 784 aaPredicted RBP14.03□□□□□ -0.16
COL4A6-207ENST00000487645 PM20D1Q6GTS8 502 aa14.03□□□□□ -0.16
COL4A6-207ENST00000487645 PTCRAQ6ISU1 281 aaPredicted RBP14.03□□□□□ -0.16
COL4A6-207ENST00000487645 TMEM110Q86TL2 294 aa14.03□□□□□ -0.16
COL4A6-207ENST00000487645 PDZD8Q8NEN9 1154 aa14.03□□□□□ -0.16
COL4A6-207ENST00000487645 SLC20A1Q8WUM9 679 aa14.03□□□□□ -0.16
COL4A6-207ENST00000487645 SLITRK1Q96PX8 696 aa14.03□□□□□ -0.16
COL4A6-207ENST00000487645 SYT11Q9BT88 431 aa14.03□□□□□ -0.16
COL4A6-207ENST00000487645 HAUS4Q9H6D7 363 aa14.03□□□□□ -0.16
COL4A6-207ENST00000487645 IL21Q9HBE4 155 aa14.03□□□□□ -0.16
COL4A6-207ENST00000487645 ZNF334Q9HCZ1 680 aaPredicted RBP14.03□□□□□ -0.16
COL4A6-207ENST00000487645 ZNHIT6Q9NWK9 470 aaKnown RBP14.03□□□□□ -0.16
COL4A6-207ENST00000487645 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.03□□□□□ -0.16
COL4A6-207ENST00000487645 ZMYM5Q9UJ78 669 aa14.03□□□□□ -0.16
COL4A6-207ENST00000487645 NCANO14594 1321 aa14.03□□□□□ -0.16
COL4A6-207ENST00000487645 CLUHO75153 1309 aa14.03□□□□□ -0.16
COL4A6-207ENST00000487645 MFAP3LO75121 409 aa14.02□□□□□ -0.17
COL4A6-207ENST00000487645 CYP1A1P04798 512 aaPredicted RBP14.02□□□□□ -0.17
COL4A6-207ENST00000487645 SKILP12757 684 aa14.02□□□□□ -0.17
COL4A6-207ENST00000487645 GABRR2P28476 465 aa14.02□□□□□ -0.17
COL4A6-207ENST00000487645 TKTL1P51854 596 aa14.02□□□□□ -0.17
COL4A6-207ENST00000487645 ADKP55263 362 aaKnown RBP14.02□□□□□ -0.17
COL4A6-207ENST00000487645 MRPS5P82675 430 aaKnown RBP14.02□□□□□ -0.17
COL4A6-207ENST00000487645 TFF2Q03403 129 aa14.02□□□□□ -0.17
COL4A6-207ENST00000487645 TAF10Q12962 218 aa14.02□□□□□ -0.17
COL4A6-207ENST00000487645 GSE1Q14687 1217 aa14.02□□□□□ -0.17
COL4A6-207ENST00000487645 SNX30Q5VWJ9 437 aa14.02□□□□□ -0.17
COL4A6-207ENST00000487645 HGSNATQ68CP4 663 aa14.02□□□□□ -0.17
COL4A6-207ENST00000487645 GAREM2Q75VX8 874 aa14.02□□□□□ -0.17
COL4A6-207ENST00000487645 GPRIN1Q7Z2K8 1008 aa14.02□□□□□ -0.17
COL4A6-207ENST00000487645 CCDC186Q7Z3E2 898 aa14.02□□□□□ -0.17
COL4A6-207ENST00000487645 MON1AQ86VX9 555 aa14.02□□□□□ -0.17
COL4A6-207ENST00000487645 PASD1Q8IV76 773 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms