RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 RFPL3O75679 317 aa12.59□□□□□ -0.39
TRIM56-204ENST00000487252 CYP11B2P19099 503 aa12.59□□□□□ -0.39
TRIM56-204ENST00000487252 CDR1P51861 262 aa12.59□□□□□ -0.39
TRIM56-204ENST00000487252 RIPPLY3P57055 190 aa12.59□□□□□ -0.39
TRIM56-204ENST00000487252 LILRA4P59901 499 aa12.59□□□□□ -0.39
TRIM56-204ENST00000487252 NFKBIBQ15653 356 aa12.59□□□□□ -0.39
TRIM56-204ENST00000487252 KIF19Q2TAC6 998 aa12.59□□□□□ -0.39
TRIM56-204ENST00000487252 GALNT17Q6IS24 598 aa12.59□□□□□ -0.39
TRIM56-204ENST00000487252 ATG14Q6ZNE5 492 aa12.59□□□□□ -0.39
TRIM56-204ENST00000487252 FILIP1Q7Z7B0 1213 aa12.59□□□□□ -0.39
TRIM56-204ENST00000487252 NEK8Q86SG6 692 aa12.59□□□□□ -0.39
TRIM56-204ENST00000487252 ETFBKMTQ8IXQ9 262 aa12.59□□□□□ -0.39
TRIM56-204ENST00000487252 FAM177A1Q8N128 213 aaPredicted RBP12.59□□□□□ -0.39
TRIM56-204ENST00000487252 STKLD1Q8NE28 680 aa12.59□□□□□ -0.39
TRIM56-204ENST00000487252 PSMG3-AS1Q96PY0 264 aa12.59□□□□□ -0.39
TRIM56-204ENST00000487252 GABRG3Q99928 467 aa12.59□□□□□ -0.39
TRIM56-204ENST00000487252 FAM117AQ9C073 453 aa12.59□□□□□ -0.39
TRIM56-204ENST00000487252 TRPC7Q9HCX4 862 aa12.59□□□□□ -0.39
TRIM56-204ENST00000487252 STARD5Q9NSY2 213 aa12.59□□□□□ -0.39
TRIM56-204ENST00000487252 HEMK1Q9Y5R4 338 aaPredicted RBP12.59□□□□□ -0.39
TRIM56-204ENST00000487252 METTL12A8MUP2 240 aa12.58□□□□□ -0.4
TRIM56-204ENST00000487252 MEI4A8MW99 385 aa12.58□□□□□ -0.4
TRIM56-204ENST00000487252 K7ERI5 159 aa12.58□□□□□ -0.4
TRIM56-204ENST00000487252 NFICP08651 508 aa12.58□□□□□ -0.4
TRIM56-204ENST00000487252 SPATA31C1P0DKV0 1188 aa12.58□□□□□ -0.4
TRIM56-204ENST00000487252 ODC1P11926 461 aa12.58□□□□□ -0.4
TRIM56-204ENST00000487252 NCAM1P13591 858 aa12.58□□□□□ -0.4
TRIM56-204ENST00000487252 GPR15P49685 360 aa12.58□□□□□ -0.4
TRIM56-204ENST00000487252 PCBP4P57723 403 aaKnown RBP12.58□□□□□ -0.4
TRIM56-204ENST00000487252 KDSRQ06136 332 aa12.58□□□□□ -0.4
TRIM56-204ENST00000487252 NFATC3Q12968 1075 aa12.58□□□□□ -0.4
TRIM56-204ENST00000487252 TAS1R3Q7RTX0 852 aa12.58□□□□□ -0.4
TRIM56-204ENST00000487252 TTC16Q8NEE8 873 aa12.58□□□□□ -0.4
TRIM56-204ENST00000487252 RFFLQ8WZ73 363 aa12.58□□□□□ -0.4
TRIM56-204ENST00000487252 IGSF8Q969P0 613 aa12.58□□□□□ -0.4
TRIM56-204ENST00000487252 TOE1Q96GM8 510 aaKnown RBP12.58□□□□□ -0.4
TRIM56-204ENST00000487252 SENP8Q96LD8 212 aa12.58□□□□□ -0.4
TRIM56-204ENST00000487252 SLC26A6Q9BXS9 759 aa12.58□□□□□ -0.4
TRIM56-204ENST00000487252 MIR1-1HGQ9H1L0 117 aa12.58□□□□□ -0.4
TRIM56-204ENST00000487252 SLC6A17Q9H1V8 727 aa12.58□□□□□ -0.4
TRIM56-204ENST00000487252 USP36Q9P275 1121 aaKnown RBP12.58□□□□□ -0.4
TRIM56-204ENST00000487252 MAGED2Q9UNF1 606 aaPredicted RBP12.58□□□□□ -0.4
TRIM56-204ENST00000487252 SNX11Q9Y5W9 270 aa12.58□□□□□ -0.4
TRIM56-204ENST00000487252 ITPR3Q14573 2671 aa12.58□□□□□ -0.4
TRIM56-204ENST00000487252 TTC26A0AVF1 554 aa12.57□□□□□ -0.4
TRIM56-204ENST00000487252 E2F8A0AVK6 867 aa12.57□□□□□ -0.4
TRIM56-204ENST00000487252 BTBD18B2RXH4 712 aa12.57□□□□□ -0.4
TRIM56-204ENST00000487252 LEFTY2O00292 366 aa12.57□□□□□ -0.4
TRIM56-204ENST00000487252 ENC1O14682 589 aa12.57□□□□□ -0.4
TRIM56-204ENST00000487252 PPEF2O14830 753 aa12.57□□□□□ -0.4
TRIM56-204ENST00000487252 CCNT1O60563 726 aaKnown RBP12.57□□□□□ -0.4
TRIM56-204ENST00000487252 PFKLP17858 780 aa12.57□□□□□ -0.4
TRIM56-204ENST00000487252 HDCP19113 662 aa12.57□□□□□ -0.4
TRIM56-204ENST00000487252 PAX3P23760 479 aa12.57□□□□□ -0.4
TRIM56-204ENST00000487252 TNFSF9P41273 254 aa12.57□□□□□ -0.4
TRIM56-204ENST00000487252 CSNK1EP49674 416 aaKnown RBP12.57□□□□□ -0.4
TRIM56-204ENST00000487252 ACADVLP49748 655 aa12.57□□□□□ -0.4
TRIM56-204ENST00000487252 CCT8P50990 548 aa12.57□□□□□ -0.4
TRIM56-204ENST00000487252 AFF3P51826 1226 aaKnown RBP12.57□□□□□ -0.4
TRIM56-204ENST00000487252 ATP2C1P98194 919 aaPredicted RBP12.57□□□□□ -0.4
TRIM56-204ENST00000487252 TSGA10IPQ3SY00 556 aa12.57□□□□□ -0.4
TRIM56-204ENST00000487252 DCAF12L1Q5VU92 463 aa12.57□□□□□ -0.4
TRIM56-204ENST00000487252 MPZL3Q6UWV2 235 aa12.57□□□□□ -0.4
TRIM56-204ENST00000487252 EXD3Q8N9H8 876 aa12.57□□□□□ -0.4
TRIM56-204ENST00000487252 ZFRQ96KR1 1074 aaKnown RBP12.57□□□□□ -0.4
TRIM56-204ENST00000487252 ZNF578Q96N58 590 aaPredicted RBP12.57□□□□□ -0.4
TRIM56-204ENST00000487252 PLEKHA5Q9HAU0 1116 aa12.57□□□□□ -0.4
TRIM56-204ENST00000487252 OSGEPQ9NPF4 335 aa12.57□□□□□ -0.4
TRIM56-204ENST00000487252 ABI2Q9NYB9 513 aaPredicted RBP12.57□□□□□ -0.4
TRIM56-204ENST00000487252 SRPK3Q9UPE1 567 aa12.57□□□□□ -0.4
TRIM56-204ENST00000487252 SLCO1B1Q9Y6L6 691 aa12.57□□□□□ -0.4
TRIM56-204ENST00000487252 LRBAP50851 2863 aa12.57□□□□□ -0.4
TRIM56-204ENST00000487252 SPTBN1Q01082 2364 aaKnown RBP12.57□□□□□ -0.4
TRIM56-204ENST00000487252 PHLPP2Q6ZVD8 1323 aa12.57□□□□□ -0.4
TRIM56-204ENST00000487252 TBC1D3BA6NDS4 549 aa12.56□□□□□ -0.4
TRIM56-204ENST00000487252 K7ENP7 123 aa12.56□□□□□ -0.4
TRIM56-204ENST00000487252 SLC9A3R1O14745 358 aaPredicted RBP12.56□□□□□ -0.4
TRIM56-204ENST00000487252 ZBTB24O43167 697 aaPredicted RBP12.56□□□□□ -0.4
TRIM56-204ENST00000487252 DXOO77932 396 aaKnown RBP12.56□□□□□ -0.4
TRIM56-204ENST00000487252 ADH1CP00326 375 aa12.56□□□□□ -0.4
TRIM56-204ENST00000487252 IGLV3-19P01714 112 aa12.56□□□□□ -0.4
TRIM56-204ENST00000487252 ADH5P11766 374 aa12.56□□□□□ -0.4
TRIM56-204ENST00000487252 KCNB1Q14721 858 aa12.56□□□□□ -0.4
TRIM56-204ENST00000487252 SAFBQ15424 915 aaKnown RBP eCLIP12.56□□□□□ -0.4
TRIM56-204ENST00000487252 ADCK5Q3MIX3 580 aa12.56□□□□□ -0.4
TRIM56-204ENST00000487252 INO80CQ6PI98 192 aaPredicted RBP12.56□□□□□ -0.4
TRIM56-204ENST00000487252 DHX40Q8IX18 779 aaKnown RBP12.56□□□□□ -0.4
TRIM56-204ENST00000487252 DCBLD1Q8N8Z6 715 aa12.56□□□□□ -0.4
TRIM56-204ENST00000487252 NAF1Q96HR8 494 aaKnown RBP12.56□□□□□ -0.4
TRIM56-204ENST00000487252 ACOX2Q99424 681 aa12.56□□□□□ -0.4
TRIM56-204ENST00000487252 NAP1L4Q99733 375 aaKnown RBP12.56□□□□□ -0.4
TRIM56-204ENST00000487252 TARS2Q9BW92 718 aaKnown RBP12.56□□□□□ -0.4
TRIM56-204ENST00000487252 GPR174Q9BXC1 333 aa12.56□□□□□ -0.4
TRIM56-204ENST00000487252 MRPL4Q9BYD3 311 aaKnown RBP12.56□□□□□ -0.4
TRIM56-204ENST00000487252 DPH1Q9BZG8 443 aa12.56□□□□□ -0.4
TRIM56-204ENST00000487252 TMEM134Q9H6X4 195 aa12.56□□□□□ -0.4
TRIM56-204ENST00000487252 ITM2CQ9NQX7 267 aa12.56□□□□□ -0.4
TRIM56-204ENST00000487252 EIF2B4Q9UI10 523 aaKnown RBP12.56□□□□□ -0.4
TRIM56-204ENST00000487252 UBQLN1Q9UMX0 589 aaKnown RBP12.56□□□□□ -0.4
TRIM56-204ENST00000487252 PCDHA12Q9UN75 941 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms