RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 MED10Q9BTT4 135 aa20.28■□□□□ 0.84
CLIP2-206ENST00000487091 EPC1Q9H2F5 836 aa20.28■□□□□ 0.84
CLIP2-206ENST00000487091 ECT2Q9H8V3 914 aa20.28■□□□□ 0.84
CLIP2-206ENST00000487091 RMND1Q9NWS8 449 aa20.28■□□□□ 0.84
CLIP2-206ENST00000487091 SPTBN4Q9H254 2564 aa20.27■□□□□ 0.84
CLIP2-206ENST00000487091 OLFM2O95897 454 aa20.27■□□□□ 0.84
CLIP2-206ENST00000487091 NDST1P52848 882 aa20.27■□□□□ 0.84
CLIP2-206ENST00000487091 PPP3CAQ08209 521 aa20.27■□□□□ 0.84
CLIP2-206ENST00000487091 EML3Q32P44 896 aa20.27■□□□□ 0.84
CLIP2-206ENST00000487091 SPOPLQ6IQ16 392 aa20.27■□□□□ 0.84
CLIP2-206ENST00000487091 ACOT1Q86TX2 421 aa20.27■□□□□ 0.84
CLIP2-206ENST00000487091 FUKQ8N0W3 1084 aa20.27■□□□□ 0.84
CLIP2-206ENST00000487091 PDZD8Q8NEN9 1154 aa20.27■□□□□ 0.84
CLIP2-206ENST00000487091 ENGASEQ8NFI3 743 aa20.27■□□□□ 0.84
CLIP2-206ENST00000487091 GSDMAQ96QA5 445 aa20.27■□□□□ 0.84
CLIP2-206ENST00000487091 KCNK16Q96T55 309 aa20.27■□□□□ 0.84
CLIP2-206ENST00000487091 IMPG2Q9BZV3 1241 aa20.27■□□□□ 0.84
CLIP2-206ENST00000487091 DMAP1Q9NPF5 467 aaPredicted RBP20.27■□□□□ 0.84
CLIP2-206ENST00000487091 COMMD8Q9NX08 183 aa20.27■□□□□ 0.84
CLIP2-206ENST00000487091 TNFRSF10BO14763 440 aa20.26■□□□□ 0.83
CLIP2-206ENST00000487091 OAS1P00973 400 aaKnown RBP20.26■□□□□ 0.83
CLIP2-206ENST00000487091 TRIM49P0CI25 452 aa20.26■□□□□ 0.83
CLIP2-206ENST00000487091 TRIM49CP0CI26 452 aa20.26■□□□□ 0.83
CLIP2-206ENST00000487091 HOXA6P31267 233 aa20.26■□□□□ 0.83
CLIP2-206ENST00000487091 GTF2H1P32780 548 aa20.26■□□□□ 0.83
CLIP2-206ENST00000487091 GJA4P35212 333 aa20.26■□□□□ 0.83
CLIP2-206ENST00000487091 ASPAP45381 313 aa20.26■□□□□ 0.83
CLIP2-206ENST00000487091 GCLMP48507 274 aa20.26■□□□□ 0.83
CLIP2-206ENST00000487091 ZXDBP98169 803 aa20.26■□□□□ 0.83
CLIP2-206ENST00000487091 NR1H3Q13133 447 aa20.26■□□□□ 0.83
CLIP2-206ENST00000487091 PNOCQ13519 176 aa20.26■□□□□ 0.83
CLIP2-206ENST00000487091 COBLL1Q53SF7 1204 aa20.26■□□□□ 0.83
CLIP2-206ENST00000487091 FSTL4Q6MZW2 842 aa20.26■□□□□ 0.83
CLIP2-206ENST00000487091 RNF38Q9H0F5 515 aa20.26■□□□□ 0.83
CLIP2-206ENST00000487091 CYP3A43Q9HB55 503 aa20.26■□□□□ 0.83
CLIP2-206ENST00000487091 TMEM8AQ9HCN3 771 aa20.26■□□□□ 0.83
CLIP2-206ENST00000487091 IL37Q9NZH6 218 aa20.26■□□□□ 0.83
CLIP2-206ENST00000487091 WNT6Q9Y6F9 365 aa20.26■□□□□ 0.83
CLIP2-206ENST00000487091 MYH10P35580 1976 aa20.25■□□□□ 0.83
CLIP2-206ENST00000487091 K7ESF4 209 aa20.25■□□□□ 0.83
CLIP2-206ENST00000487091 LEFTY2O00292 366 aa20.25■□□□□ 0.83
CLIP2-206ENST00000487091 CETN3O15182 167 aa20.25■□□□□ 0.83
CLIP2-206ENST00000487091 AP1G2O75843 785 aa20.25■□□□□ 0.83
CLIP2-206ENST00000487091 ABL1P00519 1130 aa20.25■□□□□ 0.83
CLIP2-206ENST00000487091 TRIM21P19474 475 aaKnown RBP20.25■□□□□ 0.83
CLIP2-206ENST00000487091 DRD1P21728 446 aa20.25■□□□□ 0.83
CLIP2-206ENST00000487091 GALK1P51570 392 aa20.25■□□□□ 0.83
CLIP2-206ENST00000487091 INCA1Q0VD86 236 aa20.25■□□□□ 0.83
CLIP2-206ENST00000487091 ZNF658Q5TYW1 1059 aaPredicted RBP20.25■□□□□ 0.83
CLIP2-206ENST00000487091 SNX30Q5VWJ9 437 aa20.25■□□□□ 0.83
CLIP2-206ENST00000487091 SMYD4Q8IYR2 804 aaPredicted RBP20.25■□□□□ 0.83
CLIP2-206ENST00000487091 TTC16Q8NEE8 873 aa20.25■□□□□ 0.83
CLIP2-206ENST00000487091 SPATA20Q8TB22 786 aa20.25■□□□□ 0.83
CLIP2-206ENST00000487091 TAS1R2Q8TE23 839 aa20.25■□□□□ 0.83
CLIP2-206ENST00000487091 FBXO32Q969P5 355 aa20.25■□□□□ 0.83
CLIP2-206ENST00000487091 TIGD1Q96MW7 591 aa20.25■□□□□ 0.83
CLIP2-206ENST00000487091 HINFPQ9BQA5 517 aa20.25■□□□□ 0.83
CLIP2-206ENST00000487091 GTPBP4Q9BZE4 634 aaKnown RBP20.25■□□□□ 0.83
CLIP2-206ENST00000487091 LINC00597Q9H2U6 94 aa20.25■□□□□ 0.83
CLIP2-206ENST00000487091 APOBEC3GQ9HC16 384 aaKnown RBP20.25■□□□□ 0.83
CLIP2-206ENST00000487091 CSNK1G1Q9HCP0 422 aa20.25■□□□□ 0.83
CLIP2-206ENST00000487091 FRYLO94915 3013 aa20.24■□□□□ 0.83
CLIP2-206ENST00000487091 ATG2BQ96BY7 2078 aa20.24■□□□□ 0.83
CLIP2-206ENST00000487091 FAM92AA1XBS5 289 aa20.24■□□□□ 0.83
CLIP2-206ENST00000487091 ATG13O75143 517 aa20.24■□□□□ 0.83
CLIP2-206ENST00000487091 SMC2O95347 1197 aa20.24■□□□□ 0.83
CLIP2-206ENST00000487091 NFATC1O95644 943 aa20.24■□□□□ 0.83
CLIP2-206ENST00000487091 PRCPP42785 496 aa20.24■□□□□ 0.83
CLIP2-206ENST00000487091 SLC5A3P53794 718 aa20.24■□□□□ 0.83
CLIP2-206ENST00000487091 IFRD2Q12894 506 aaPredicted RBP20.24■□□□□ 0.83
CLIP2-206ENST00000487091 FBXO43Q4G163 708 aa20.24■□□□□ 0.83
CLIP2-206ENST00000487091 KRT39Q6A163 491 aa20.24■□□□□ 0.83
CLIP2-206ENST00000487091 CCDC150Q8NCX0 1101 aa20.24■□□□□ 0.83
CLIP2-206ENST00000487091 SCAMP5Q8TAC9 235 aa20.24■□□□□ 0.83
CLIP2-206ENST00000487091 FAXDC2Q96IV6 333 aa20.24■□□□□ 0.83
CLIP2-206ENST00000487091 P2RY13Q9BPV8 354 aa20.24■□□□□ 0.83
CLIP2-206ENST00000487091 HMGXB4Q9UGU5 601 aa20.24■□□□□ 0.83
CLIP2-206ENST00000487091 HOOK1Q9UJC3 728 aaKnown RBP20.24■□□□□ 0.83
CLIP2-206ENST00000487091 SMG5Q9UPR3 1016 aaKnown RBP20.24■□□□□ 0.83
CLIP2-206ENST00000487091 CPQQ9Y646 472 aa20.24■□□□□ 0.83
CLIP2-206ENST00000487091 STX10O60499 249 aa20.23■□□□□ 0.83
CLIP2-206ENST00000487091 EPB41P11171 864 aaKnown RBP20.23■□□□□ 0.83
CLIP2-206ENST00000487091 CNR2P34972 360 aa20.23■□□□□ 0.83
CLIP2-206ENST00000487091 LONP2Q86WA8 852 aa20.23■□□□□ 0.83
CLIP2-206ENST00000487091 DDX42Q86XP3 938 aaKnown RBP eCLIP20.23■□□□□ 0.83
CLIP2-206ENST00000487091 ZMIZ2Q8NF64 920 aa20.23■□□□□ 0.83
CLIP2-206ENST00000487091 SLC2A14Q8TDB8 520 aa20.23■□□□□ 0.83
CLIP2-206ENST00000487091 SECISBP2LQ93073 1101 aaKnown RBP20.23■□□□□ 0.83
CLIP2-206ENST00000487091 HNRNPABQ99729 332 aaKnown RBP20.23■□□□□ 0.83
CLIP2-206ENST00000487091 SMOQ99835 787 aa20.23■□□□□ 0.83
CLIP2-206ENST00000487091 NT5C1AQ9BXI3 368 aa20.23■□□□□ 0.83
CLIP2-206ENST00000487091 NIF3L1Q9GZT8 377 aa20.23■□□□□ 0.83
CLIP2-206ENST00000487091 FBRSL1Q9HCM7 1045 aaKnown RBP20.23■□□□□ 0.83
CLIP2-206ENST00000487091 KRT82Q9NSB4 513 aa20.23■□□□□ 0.83
CLIP2-206ENST00000487091 C2orf42Q9NWW7 574 aa20.23■□□□□ 0.83
CLIP2-206ENST00000487091 NCDNQ9UBB6 729 aa20.23■□□□□ 0.83
CLIP2-206ENST00000487091 PCDHA5Q9Y5H7 936 aa20.23■□□□□ 0.83
CLIP2-206ENST00000487091 CHURC1-FNTBB4DL54 471 aa20.22■□□□□ 0.83
CLIP2-206ENST00000487091 SLC9A3R1O14745 358 aaPredicted RBP20.22■□□□□ 0.83
CLIP2-206ENST00000487091 EGFP01133 1207 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms