RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 MED10Q9BTT4 135 aa26.11■■□□□ 1.77
LIME1-206ENST00000487026 SMPD4Q9NXE4 827 aa26.11■■□□□ 1.77
LIME1-206ENST00000487026 SLC8A2Q9UPR5 921 aa26.11■■□□□ 1.77
LIME1-206ENST00000487026 SCAMP3O14828 347 aaKnown RBP26.1■■□□□ 1.77
LIME1-206ENST00000487026 ATG13O75143 517 aa26.1■■□□□ 1.77
LIME1-206ENST00000487026 RETP07949 1114 aa26.1■■□□□ 1.77
LIME1-206ENST00000487026 TCF3P15923 654 aa26.1■■□□□ 1.77
LIME1-206ENST00000487026 PDE6CP51160 858 aa26.1■■□□□ 1.77
LIME1-206ENST00000487026 ORC1Q13415 861 aa26.1■■□□□ 1.77
LIME1-206ENST00000487026 PAQR9Q6ZVX9 377 aa26.1■■□□□ 1.77
LIME1-206ENST00000487026 NUP93Q8N1F7 819 aa26.1■■□□□ 1.77
LIME1-206ENST00000487026 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.1■■□□□ 1.777e-7■■■■■ 94.2
LIME1-206ENST00000487026 MAPK8IP1Q9UQF2 711 aa26.1■■□□□ 1.77
LIME1-206ENST00000487026 CPQQ9Y646 472 aa26.1■■□□□ 1.77
LIME1-206ENST00000487026 PPP3CCP48454 512 aa26.09■■□□□ 1.77
LIME1-206ENST00000487026 SLC7A9P82251 487 aa26.09■■□□□ 1.77
LIME1-206ENST00000487026 NR1H3Q13133 447 aa26.09■■□□□ 1.77
LIME1-206ENST00000487026 C1orf220Q5T0J3 134 aa26.09■■□□□ 1.77
LIME1-206ENST00000487026 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.09■■□□□ 1.77
LIME1-206ENST00000487026 ACOT1Q86TX2 421 aa26.09■■□□□ 1.77
LIME1-206ENST00000487026 TMEM174Q8WUU8 243 aa26.09■■□□□ 1.77
LIME1-206ENST00000487026 SLITRK1Q96PX8 696 aa26.09■■□□□ 1.77
LIME1-206ENST00000487026 CHORDC1Q9UHD1 332 aaPredicted RBP26.09■■□□□ 1.77
LIME1-206ENST00000487026 MED19A0JLT2 244 aaPredicted RBP26.08■■□□□ 1.77
LIME1-206ENST00000487026 MYL1P05976 194 aa26.08■■□□□ 1.77
LIME1-206ENST00000487026 PFKLP17858 780 aa26.08■■□□□ 1.77
LIME1-206ENST00000487026 YWHAQP27348 245 aa26.08■■□□□ 1.77
LIME1-206ENST00000487026 SGSM1Q2NKQ1 1148 aa26.08■■□□□ 1.77
LIME1-206ENST00000487026 ZACNQ401N2 412 aa26.08■■□□□ 1.77
LIME1-206ENST00000487026 SPOPLQ6IQ16 392 aa26.08■■□□□ 1.77
LIME1-206ENST00000487026 SV2AQ7L0J3 742 aa26.08■■□□□ 1.77
LIME1-206ENST00000487026 FILIP1Q7Z7B0 1213 aa26.08■■□□□ 1.77
LIME1-206ENST00000487026 FAM35AQ86V20 835 aa26.08■■□□□ 1.77
LIME1-206ENST00000487026 FAM160A2Q8N612 972 aaPredicted RBP26.08■■□□□ 1.77
LIME1-206ENST00000487026 RPLP0P6Q8NHW5 317 aa26.08■■□□□ 1.77
LIME1-206ENST00000487026 SCAMP5Q8TAC9 235 aa26.08■■□□□ 1.77
LIME1-206ENST00000487026 EXOC4Q96A65 974 aa26.08■■□□□ 1.77
LIME1-206ENST00000487026 FRMD4BQ9Y2L6 1034 aa26.08■■□□□ 1.77
LIME1-206ENST00000487026 DYNC1LI1Q9Y6G9 523 aaKnown RBP26.08■■□□□ 1.77
LIME1-206ENST00000487026 FAM237AA0A1B0GTK4 181 aa26.07■■□□□ 1.76
LIME1-206ENST00000487026 CALUO43852 315 aaPredicted RBP26.07■■□□□ 1.76
LIME1-206ENST00000487026 NFATC1O95644 943 aa26.07■■□□□ 1.76
LIME1-206ENST00000487026 OAS1P00973 400 aaKnown RBP26.07■■□□□ 1.76
LIME1-206ENST00000487026 LMNB2Q03252 620 aa26.07■■□□□ 1.76
LIME1-206ENST00000487026 DPYDQ12882 1025 aa26.07■■□□□ 1.76
LIME1-206ENST00000487026 TMC2Q8TDI7 906 aa26.07■■□□□ 1.76
LIME1-206ENST00000487026 FBXO32Q969P5 355 aa26.07■■□□□ 1.76
LIME1-206ENST00000487026 TNIP3Q96KP6 325 aa26.07■■□□□ 1.76
LIME1-206ENST00000487026 HHIPQ96QV1 700 aa26.07■■□□□ 1.76
LIME1-206ENST00000487026 GOLPH3LQ9H4A5 285 aa26.07■■□□□ 1.76
LIME1-206ENST00000487026 CFAP97Q9P2B7 532 aa26.07■■□□□ 1.76
LIME1-206ENST00000487026 HMGXB4Q9UGU5 601 aa26.07■■□□□ 1.76
LIME1-206ENST00000487026 HELZP42694 1942 aaKnown RBP26.07■■□□□ 1.76
LIME1-206ENST00000487026 PRR5-ARHGAP8B1AHC4 643 aa26.06■■□□□ 1.76
LIME1-206ENST00000487026 RTN3O95197 1032 aaPredicted RBP26.06■■□□□ 1.76
LIME1-206ENST00000487026 OLFM2O95897 454 aa26.06■■□□□ 1.76
LIME1-206ENST00000487026 MBL2P11226 248 aaPredicted RBP26.06■■□□□ 1.76
LIME1-206ENST00000487026 CCDC130P13994 396 aa26.06■■□□□ 1.76
LIME1-206ENST00000487026 ATXN1P54253 815 aaKnown RBP26.06■■□□□ 1.76
LIME1-206ENST00000487026 ARHGAP8P85298 464 aa26.06■■□□□ 1.76
LIME1-206ENST00000487026 FBXO43Q4G163 708 aa26.06■■□□□ 1.76
LIME1-206ENST00000487026 ADGRG2Q8IZP9 1017 aa26.06■■□□□ 1.76
LIME1-206ENST00000487026 SEMA4GQ9NTN9 838 aa26.06■■□□□ 1.76
LIME1-206ENST00000487026 TRAF3IP3Q9Y228 551 aa26.06■■□□□ 1.76
LIME1-206ENST00000487026 GTF3C3Q9Y5Q9 886 aa26.06■■□□□ 1.76
LIME1-206ENST00000487026 ATP8B3O60423 1300 aa26.06■■□□□ 1.76
LIME1-206ENST00000487026 SDK1Q7Z5N4 2213 aa26.06■■□□□ 1.76
LIME1-206ENST00000487026 ANTXRLA6NF34 631 aa26.05■■□□□ 1.76
LIME1-206ENST00000487026 TNFRSF10BO14763 440 aa26.05■■□□□ 1.76
LIME1-206ENST00000487026 AP1G2O75843 785 aa26.05■■□□□ 1.76
LIME1-206ENST00000487026 RHOBTB3O94955 611 aa26.05■■□□□ 1.76
LIME1-206ENST00000487026 HLA-DRAP01903 254 aa26.05■■□□□ 1.76
LIME1-206ENST00000487026 P4HA1P13674 534 aa26.05■■□□□ 1.76
LIME1-206ENST00000487026 OPRD1P41143 372 aa26.05■■□□□ 1.76
LIME1-206ENST00000487026 NDST1P52848 882 aa26.05■■□□□ 1.76
LIME1-206ENST00000487026 KRBA2Q6ZNG9 492 aa26.05■■□□□ 1.76
LIME1-206ENST00000487026 FUKQ8N0W3 1084 aa26.05■■□□□ 1.76
LIME1-206ENST00000487026 GAB3Q8WWW8 586 aa26.05■■□□□ 1.76
LIME1-206ENST00000487026 CCDC47Q96A33 483 aaKnown RBP26.05■■□□□ 1.76
LIME1-206ENST00000487026 GDPD2Q9HCC8 539 aa26.05■■□□□ 1.76
LIME1-206ENST00000487026 DMAP1Q9NPF5 467 aaPredicted RBP26.05■■□□□ 1.76
LIME1-206ENST00000487026 IKBKBO14920 756 aa26.04■■□□□ 1.76
LIME1-206ENST00000487026 AXIN1O15169 862 aa26.04■■□□□ 1.76
LIME1-206ENST00000487026 RPP40O75818 363 aaKnown RBP26.04■■□□□ 1.76
LIME1-206ENST00000487026 AKAP3O75969 853 aa26.04■■□□□ 1.76
LIME1-206ENST00000487026 BEST1O76090 585 aa26.04■■□□□ 1.76
LIME1-206ENST00000487026 ASS1P00966 412 aaKnown RBP26.04■■□□□ 1.76
LIME1-206ENST00000487026 CYP17A1P05093 508 aa26.04■■□□□ 1.76
LIME1-206ENST00000487026 TRIM49P0CI25 452 aa26.04■■□□□ 1.76
LIME1-206ENST00000487026 TRIM49CP0CI26 452 aa26.04■■□□□ 1.76
LIME1-206ENST00000487026 NR2F2P24468 414 aa26.04■■□□□ 1.76
LIME1-206ENST00000487026 PIK3CAP42336 1068 aa26.04■■□□□ 1.76
LIME1-206ENST00000487026 VAMP7P51809 220 aa26.04■■□□□ 1.76
LIME1-206ENST00000487026 SLC5A3P53794 718 aa26.04■■□□□ 1.76
LIME1-206ENST00000487026 SEC13P55735 322 aa26.04■■□□□ 1.76
LIME1-206ENST00000487026 GAB4Q2WGN9 574 aa26.04■■□□□ 1.76
LIME1-206ENST00000487026 C12orf29Q8N999 325 aa26.04■■□□□ 1.76
LIME1-206ENST00000487026 SLC2A14Q8TDB8 520 aa26.04■■□□□ 1.76
LIME1-206ENST00000487026 SMARCD1Q96GM5 515 aa26.04■■□□□ 1.76
LIME1-206ENST00000487026 SMOQ99835 787 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms