RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 A0A1W2PQF6 199 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 KAT7O95251 611 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 NFATC1O95644 943 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 CER1O95813 267 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 CYP17A1P05093 508 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 HAPLN1P10915 354 aaPredicted RBP8.93□□□□□ -0.98
XRN1-212ENST00000486211 XRCC6P12956 609 aaKnown RBP eCLIP8.93□□□□□ -0.98
XRN1-212ENST00000486211 KRT10P13645 584 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 GNSP15586 552 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 TCF3P15923 654 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 GCFC2P16383 781 aaKnown RBP8.93□□□□□ -0.98
XRN1-212ENST00000486211 IFNAR1P17181 557 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 ATP2B1P20020 1258 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 PROZP22891 400 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 CLDN6P56747 220 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 ZXDBP98169 803 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 AKAP17AQ02040 695 aaKnown RBP8.93□□□□□ -0.98
XRN1-212ENST00000486211 DMP1Q13316 513 aaPredicted RBP8.93□□□□□ -0.98
XRN1-212ENST00000486211 ARID5BQ14865 1188 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 HLA-BQ31612 363 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 SLC10A6Q3KNW5 377 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 ADCK5Q3MIX3 580 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 ZNF568Q3ZCX4 644 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 SLC39A12Q504Y0 691 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 ZC2HC1CQ53FD0 456 aaPredicted RBP8.93□□□□□ -0.98
XRN1-212ENST00000486211 APBB1IPQ7Z5R6 666 aaPredicted RBP8.93□□□□□ -0.98
XRN1-212ENST00000486211 PHTF2Q8N3S3 785 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 SH3RF2Q8TEC5 729 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 DNASE2BQ8WZ79 361 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 MRPS31Q92665 395 aaKnown RBP8.93□□□□□ -0.98
XRN1-212ENST00000486211 CCDC43Q96MW1 224 aaKnown RBP8.93□□□□□ -0.98
XRN1-212ENST00000486211 PNKPQ96T60 521 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 ACO2Q99798 780 aaKnown RBP8.93□□□□□ -0.98
XRN1-212ENST00000486211 ZCWPW1Q9H0M4 648 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 RWDD1Q9H446 243 aaPredicted RBP8.93□□□□□ -0.98
XRN1-212ENST00000486211 TMEM206Q9H813 350 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 GCNT4Q9P109 453 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 HCN2Q9UL51 889 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 CYP8B1Q9UNU6 501 aa8.93□□□□□ -0.98
XRN1-212ENST00000486211 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.93□□□□□ -0.98
XRN1-212ENST00000486211 CCNT1O60563 726 aaKnown RBP8.92□□□□□ -0.98
XRN1-212ENST00000486211 KRT38O76015 456 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 USP17L7P0C7H9 530 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 SPATA31C1P0DKV0 1188 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 MCF2P10911 925 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 MATKP42679 507 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 EFNA5P52803 228 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 CCDC173Q0VFZ6 552 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 ZBTB6Q15916 424 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 TAF12Q16514 161 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 PREPLQ4J6C6 727 aaPredicted RBP8.92□□□□□ -0.98
XRN1-212ENST00000486211 SYCP2LQ5T4T6 812 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 C6orf118Q5T5N4 469 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 ARMCX5Q6P1M9 558 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 NEK8Q86SG6 692 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 LRRTM3Q86VH5 581 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 ERICH1Q86X53 443 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 ZCCHC9Q8N567 271 aaKnown RBP8.92□□□□□ -0.98
XRN1-212ENST00000486211 TTC16Q8NEE8 873 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 LRRC15Q8TF66 581 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 FGF11Q92914 225 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 FOXJ1Q92949 421 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 MED8Q96G25 268 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 TMEM176AQ96HP8 235 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 CDK15Q96Q40 435 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 NACC1Q96RE7 527 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 ARID3AQ99856 593 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 TRIM4Q9C037 500 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 NRSN2Q9GZP1 204 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 GMIPQ9P107 970 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 ANKMY1Q9P2S6 941 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 NFE2L3Q9Y4A8 694 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 AK5Q9Y6K8 562 aa8.92□□□□□ -0.98
XRN1-212ENST00000486211 MYO18AQ92614 2054 aaKnown RBP8.92□□□□□ -0.98
XRN1-212ENST00000486211 STK36Q9NRP7 1315 aa8.91□□□□□ -0.98
XRN1-212ENST00000486211 PPEF2O14830 753 aa8.91□□□□□ -0.98
XRN1-212ENST00000486211 ZNF217O75362 1048 aa8.91□□□□□ -0.98
XRN1-212ENST00000486211 APODP05090 189 aa8.91□□□□□ -0.98
XRN1-212ENST00000486211 CKMP06732 381 aa8.91□□□□□ -0.98
XRN1-212ENST00000486211 GP1BBP13224 206 aa8.91□□□□□ -0.98
XRN1-212ENST00000486211 CYP11B2P19099 503 aa8.91□□□□□ -0.98
XRN1-212ENST00000486211 EIF2DP41214 584 aaKnown RBP8.91□□□□□ -0.98
XRN1-212ENST00000486211 GRIA2P42262 883 aa8.91□□□□□ -0.98
XRN1-212ENST00000486211 TNFRSF4P43489 277 aa8.91□□□□□ -0.98
XRN1-212ENST00000486211 GPR15P49685 360 aa8.91□□□□□ -0.98
XRN1-212ENST00000486211 AGERQ15109 404 aa8.91□□□□□ -0.98
XRN1-212ENST00000486211 PPP2R5AQ15172 486 aa8.91□□□□□ -0.98
XRN1-212ENST00000486211 CCDC157Q569K6 752 aa8.91□□□□□ -0.98
XRN1-212ENST00000486211 WDR45BQ5MNZ6 344 aa8.91□□□□□ -0.98
XRN1-212ENST00000486211 IL27RAQ6UWB1 636 aa8.91□□□□□ -0.98
XRN1-212ENST00000486211 DSTYKQ6XUX3 929 aa8.91□□□□□ -0.98
XRN1-212ENST00000486211 TAS1R3Q7RTX0 852 aa8.91□□□□□ -0.98
XRN1-212ENST00000486211 MIB1Q86YT6 1006 aa8.91□□□□□ -0.98
XRN1-212ENST00000486211 SLFN12Q8IYM2 578 aa8.91□□□□□ -0.98
XRN1-212ENST00000486211 ARL14EPQ8N8R7 260 aaPredicted RBP8.91□□□□□ -0.98
XRN1-212ENST00000486211 ARMC2Q8NEN0 867 aa8.91□□□□□ -0.98
XRN1-212ENST00000486211 C1orf216Q8TAB5 229 aa8.91□□□□□ -0.98
XRN1-212ENST00000486211 SPATA18Q8TC71 538 aa8.91□□□□□ -0.98
XRN1-212ENST00000486211 SPPL2BQ8TCT7 592 aa8.91□□□□□ -0.98
XRN1-212ENST00000486211 C2orf15Q8WU43 125 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms