RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 NDUFB7P17568 137 aa5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 CLCN2P51788 898 aa5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 WNT3P56703 355 aa5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 E2F2Q14209 437 aa5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 PPP2R5AQ15172 486 aa5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 FAM102BQ5T8I3 360 aa5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 LMBRD2Q68DH5 695 aaPredicted RBP5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 RGS7BPQ6MZT1 257 aaPredicted RBP5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 NPNTQ6UXI9 565 aa5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 ZNF783Q6ZMS7 281 aa5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 PTF1AQ7RTS3 328 aa5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 CHPFQ8IZ52 775 aa5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 ATG4AQ8WYN0 398 aa5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 NDRG4Q9ULP0 352 aaKnown RBP5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 NOB1Q9ULX3 412 aaKnown RBP5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 SH2B3Q9UQQ2 575 aa5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 MBD5Q9P267 1494 aa5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 KDM5AP29375 1690 aaKnown RBP5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 ABCC3O15438 1527 aa5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 SLIT1O75093 1534 aa5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 NWD1Q149M9 1564 aa5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 A0A087WWL8 130 aa5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 KIF3BO15066 747 aa5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 PRPF3O43395 683 aaKnown RBP5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 KITP10721 976 aa5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 XRCC6P12956 609 aaKnown RBP eCLIP5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 LRPAP1P30533 357 aa5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 LIPAP38571 399 aa5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 ALDH9A1P49189 494 aa5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 SP2Q02086 613 aa5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 LRRC41Q15345 812 aa5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 TREML2Q5T2D2 321 aa5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 FCRLBQ6BAA4 426 aa5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 NXNQ6DKJ4 435 aa5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 ANKRD16Q6P6B7 361 aa5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 TCEAL8Q8IYN2 117 aa5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 DNAJC5GQ8N7S2 189 aa5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 OR6B3Q8NGW1 331 aa5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 HASPINQ8TF76 798 aa5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 DPH1Q9BZG8 443 aa5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 TMEM60Q9H2L4 133 aa5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 ATP6V0A4Q9HBG4 840 aa5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 PADI4Q9UM07 663 aa5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 PIK3C2BO00750 1634 aa5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 PRDM15P57071 1507 aaPredicted RBP5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 KIAA1107Q9UPP5 1409 aa5.73□□□□□ -1.49
SMARCC1-207ENST00000485833 DHX29Q7Z478 1369 aaKnown RBP5.72□□□□□ -1.49
SMARCC1-207ENST00000485833 CAPN8A6NHC0 703 aa5.72□□□□□ -1.49
SMARCC1-207ENST00000485833 FAM227AF5H4B4 570 aa5.72□□□□□ -1.49
SMARCC1-207ENST00000485833 ONECUT2O95948 504 aa5.72□□□□□ -1.49
SMARCC1-207ENST00000485833 IL6RP08887 468 aaPredicted RBP5.72□□□□□ -1.49
SMARCC1-207ENST00000485833 MYO1EQ12965 1108 aa5.72□□□□□ -1.49
SMARCC1-207ENST00000485833 MINDY4Q4G0A6 757 aa5.72□□□□□ -1.49
SMARCC1-207ENST00000485833 MAEAQ7L5Y9 396 aa5.72□□□□□ -1.49
SMARCC1-207ENST00000485833 COL23A1Q86Y22 540 aaPredicted RBP5.72□□□□□ -1.49
SMARCC1-207ENST00000485833 SLC15A4Q8N697 577 aa5.72□□□□□ -1.49
SMARCC1-207ENST00000485833 JDP2Q8WYK2 163 aa5.72□□□□□ -1.49
SMARCC1-207ENST00000485833 MESP1Q9BRJ9 268 aa5.72□□□□□ -1.49
SMARCC1-207ENST00000485833 GLOD4Q9HC38 313 aa5.72□□□□□ -1.49
SMARCC1-207ENST00000485833 EID1Q9Y6B2 187 aa5.72□□□□□ -1.49
SMARCC1-207ENST00000485833 AHDC1Q5TGY3 1603 aaPredicted RBP5.72□□□□□ -1.49
SMARCC1-207ENST00000485833 TET3O43151 1660 aa5.72□□□□□ -1.49
SMARCC1-207ENST00000485833 AFF2P51816 1311 aa5.72□□□□□ -1.49
SMARCC1-207ENST00000485833 LRRC9Q6ZRR7 1453 aa5.71□□□□□ -1.49
SMARCC1-207ENST00000485833 LRP5O75197 1615 aa5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 WIPF3A6NGB9 483 aa5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 H0YIZ8 118 aa5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 hCG_1984214I3L0E3 225 aa5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 BTN3A1O00481 513 aa5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 ERC2O15083 957 aa5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 HNRNPCP07910 306 aaKnown RBP eCLIP5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 EN2P19622 333 aaPredicted RBP5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 ATXN1P54253 815 aaKnown RBP5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 KRT17Q04695 432 aa5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 SLC13A2Q13183 592 aa5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 CTBP1Q13363 440 aa5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 MGAT5BQ3V5L5 792 aa5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 MEX3CQ5U5Q3 659 aaKnown RBP5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 ZKSCAN2Q63HK3 967 aa5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 ZNF772Q68DY9 489 aaPredicted RBP5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 SUMO4Q6EEV6 95 aa5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 SWSAP1Q6NVH7 229 aa5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 CEP85Q6P2H3 762 aa5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 WDR53Q7Z5U6 358 aaPredicted RBP5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 GAS2L3Q86XJ1 694 aa5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 KIAA0319LQ8IZA0 1049 aa5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 MAGEB6Q8N7X4 407 aa5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 IL31RAQ8NI17 732 aa5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 TBC1D5Q92609 795 aa5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 GLG1Q92896 1179 aa5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 C1orf112Q9NSG2 853 aa5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 MRPS17Q9Y2R5 130 aaKnown RBP5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 AOX1Q06278 1338 aa5.71□□□□□ -1.5
SMARCC1-207ENST00000485833 MANSC4A6NHS7 340 aaPredicted RBP5.7□□□□□ -1.5
SMARCC1-207ENST00000485833 MARCH6O60337 910 aa5.7□□□□□ -1.5
SMARCC1-207ENST00000485833 FESP07332 822 aa5.7□□□□□ -1.5
SMARCC1-207ENST00000485833 CSF1RP07333 972 aa5.7□□□□□ -1.5
SMARCC1-207ENST00000485833 FAM163BP0C2L3 166 aa5.7□□□□□ -1.5
SMARCC1-207ENST00000485833 SLC7A1P30825 629 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms