RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 GOLGA5Q8TBA6 731 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 OSCP1Q8WVF1 389 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 SCFD1Q8WVM8 642 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 KBTBD7Q8WVZ9 684 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 LOXL4Q96JB6 756 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 SPATA17Q96L03 361 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 CYP2S1Q96SQ9 504 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 P2RY13Q9BPV8 354 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 RXFP3Q9NSD7 469 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 EXOC1Q9NV70 894 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 POLR3BQ9NW08 1133 aaPredicted RBP14.13□□□□□ -0.15
UBA3-210ENST00000485424 NXF1Q9UBU9 619 aaKnown RBP14.13□□□□□ -0.15
UBA3-210ENST00000485424 ATP8B3O60423 1300 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 CST3P01034 146 aaPredicted RBP14.12□□□□□ -0.15
UBA3-210ENST00000485424 ZNF806P0C7X5 589 aa14.12□□□□□ -0.15
UBA3-210ENST00000485424 PFKLP17858 780 aa14.12□□□□□ -0.15
UBA3-210ENST00000485424 TRIM21P19474 475 aaKnown RBP14.12□□□□□ -0.15
UBA3-210ENST00000485424 ATICP31939 592 aa14.12□□□□□ -0.15
UBA3-210ENST00000485424 HOXD13P35453 343 aa14.12□□□□□ -0.15
UBA3-210ENST00000485424 PPP3CCP48454 512 aa14.12□□□□□ -0.15
UBA3-210ENST00000485424 USP4Q13107 963 aa14.12□□□□□ -0.15
UBA3-210ENST00000485424 ZNF77Q15935 545 aa14.12□□□□□ -0.15
UBA3-210ENST00000485424 FBXO43Q4G163 708 aa14.12□□□□□ -0.15
UBA3-210ENST00000485424 TDRD10Q5VZ19 366 aaKnown RBP14.12□□□□□ -0.15
UBA3-210ENST00000485424 RESP18Q5W5W9 173 aa14.12□□□□□ -0.15
UBA3-210ENST00000485424 CCDC26Q8TAB7 109 aa14.12□□□□□ -0.15
UBA3-210ENST00000485424 MYCBPAPQ8TBZ2 947 aa14.12□□□□□ -0.15
UBA3-210ENST00000485424 SH3RF2Q8TEC5 729 aa14.12□□□□□ -0.15
UBA3-210ENST00000485424 CCDC47Q96A33 483 aaKnown RBP14.12□□□□□ -0.15
UBA3-210ENST00000485424 PCED1BQ96HM7 432 aa14.12□□□□□ -0.15
UBA3-210ENST00000485424 SLITRK1Q96PX8 696 aa14.12□□□□□ -0.15
UBA3-210ENST00000485424 HHIPQ96QV1 700 aa14.12□□□□□ -0.15
UBA3-210ENST00000485424 ELOVL4Q9GZR5 314 aa14.12□□□□□ -0.15
UBA3-210ENST00000485424 ECT2Q9H8V3 914 aa14.12□□□□□ -0.15
UBA3-210ENST00000485424 FBRSL1Q9HCM7 1045 aaKnown RBP14.12□□□□□ -0.15
UBA3-210ENST00000485424 CRTAC1Q9NQ79 661 aa14.12□□□□□ -0.15
UBA3-210ENST00000485424 WNT6Q9Y6F9 365 aa14.12□□□□□ -0.15
UBA3-210ENST00000485424 C2orf78A6NCI8 922 aa14.11□□□□□ -0.15
UBA3-210ENST00000485424 TACC1O75410 805 aa14.11□□□□□ -0.15
UBA3-210ENST00000485424 AKAP3O75969 853 aa14.11□□□□□ -0.15
UBA3-210ENST00000485424 NFATC1O95644 943 aa14.11□□□□□ -0.15
UBA3-210ENST00000485424 FAM163BP0C2L3 166 aa14.11□□□□□ -0.15
UBA3-210ENST00000485424 GJA4P35212 333 aa14.11□□□□□ -0.15
UBA3-210ENST00000485424 GALK1P51570 392 aa14.11□□□□□ -0.15
UBA3-210ENST00000485424 AP3M2P53677 418 aa14.11□□□□□ -0.15
UBA3-210ENST00000485424 CUL4BQ13620 913 aa14.11□□□□□ -0.15
UBA3-210ENST00000485424 ST3GAL2Q16842 350 aa14.11□□□□□ -0.15
UBA3-210ENST00000485424 ZNF667Q5HYK9 610 aa14.11□□□□□ -0.15
UBA3-210ENST00000485424 PLA2G2CQ5R387 149 aa14.11□□□□□ -0.15
UBA3-210ENST00000485424 IL31Q6EBC2 164 aa14.11□□□□□ -0.15
UBA3-210ENST00000485424 C12orf56Q8IXR9 622 aa14.11□□□□□ -0.15
UBA3-210ENST00000485424 C12orf50Q8NA57 414 aaPredicted RBP14.11□□□□□ -0.15
UBA3-210ENST00000485424 DDX1Q92499 740 aaKnown RBP14.11□□□□□ -0.15
UBA3-210ENST00000485424 EZH1Q92800 747 aaPredicted RBP14.11□□□□□ -0.15
UBA3-210ENST00000485424 CD101Q93033 1021 aa14.11□□□□□ -0.15
UBA3-210ENST00000485424 SLC22A12Q96S37 553 aa14.11□□□□□ -0.15
UBA3-210ENST00000485424 MRPL45Q9BRJ2 306 aaKnown RBP14.11□□□□□ -0.15
UBA3-210ENST00000485424 MED10Q9BTT4 135 aa14.11□□□□□ -0.15
UBA3-210ENST00000485424 SMOC1Q9H4F8 434 aa14.11□□□□□ -0.15
UBA3-210ENST00000485424 SERTAD1Q9UHV2 236 aa14.11□□□□□ -0.15
UBA3-210ENST00000485424 SPEGQ15772 3267 aa14.1□□□□□ -0.15
UBA3-210ENST00000485424 CACNA1EQ15878 2313 aa14.1□□□□□ -0.15
UBA3-210ENST00000485424 F8VP50 259 aa14.1□□□□□ -0.15
UBA3-210ENST00000485424 TM4SF5O14894 197 aa14.1□□□□□ -0.15
UBA3-210ENST00000485424 P4HA1P13674 534 aa14.1□□□□□ -0.15
UBA3-210ENST00000485424 PTPN1P18031 435 aaKnown RBP14.1□□□□□ -0.15
UBA3-210ENST00000485424 MPLP40238 635 aa14.1□□□□□ -0.15
UBA3-210ENST00000485424 MYL6P60660 151 aa14.1□□□□□ -0.15
UBA3-210ENST00000485424 DNM1Q05193 864 aaKnown RBP14.1□□□□□ -0.15
UBA3-210ENST00000485424 EHHADHQ08426 723 aa14.1□□□□□ -0.15
UBA3-210ENST00000485424 BMT2Q1RMZ1 405 aa14.1□□□□□ -0.15
UBA3-210ENST00000485424 ZNF699Q32M78 642 aa14.1□□□□□ -0.15
UBA3-210ENST00000485424 LIMS2Q7Z4I7 341 aa14.1□□□□□ -0.15
UBA3-210ENST00000485424 GRAMD1CQ8IYS0 662 aa14.1□□□□□ -0.15
UBA3-210ENST00000485424 CAMKK1Q8N5S9 505 aa14.1□□□□□ -0.15
UBA3-210ENST00000485424 RPLP0P6Q8NHW5 317 aa14.1□□□□□ -0.15
UBA3-210ENST00000485424 ACDQ96AP0 544 aa14.1□□□□□ -0.15
UBA3-210ENST00000485424 ZC3H10Q96K80 434 aaKnown RBP14.1□□□□□ -0.15
UBA3-210ENST00000485424 ARHGAP26Q9UNA1 814 aa14.1□□□□□ -0.15
UBA3-210ENST00000485424 RTN3O95197 1032 aaPredicted RBP14.09□□□□□ -0.15
UBA3-210ENST00000485424 KIF20AO95235 890 aa14.09□□□□□ -0.15
UBA3-210ENST00000485424 STAU1O95793 577 aaKnown RBP14.09□□□□□ -0.15
UBA3-210ENST00000485424 SLFN14P0C7P3 912 aa14.09□□□□□ -0.15
UBA3-210ENST00000485424 NOP14P78316 857 aaKnown RBP14.09□□□□□ -0.15
UBA3-210ENST00000485424 EML3Q32P44 896 aa14.09□□□□□ -0.15
UBA3-210ENST00000485424 PLK5Q496M5 336 aa14.09□□□□□ -0.15
UBA3-210ENST00000485424 STPG1Q5TH74 334 aa14.09□□□□□ -0.15
UBA3-210ENST00000485424 SCARA5Q6ZMJ2 495 aa14.09□□□□□ -0.15
UBA3-210ENST00000485424 DDX42Q86XP3 938 aaKnown RBP eCLIP14.09□□□□□ -0.15
UBA3-210ENST00000485424 B3GALNT2Q8NCR0 500 aa14.09□□□□□ -0.15
UBA3-210ENST00000485424 PDZD8Q8NEN9 1154 aa14.09□□□□□ -0.15
UBA3-210ENST00000485424 TNIP3Q96KP6 325 aa14.09□□□□□ -0.15
UBA3-210ENST00000485424 SPATA32Q96LK8 384 aa14.09□□□□□ -0.15
UBA3-210ENST00000485424 C8orf48Q96LL4 319 aa14.09□□□□□ -0.15
UBA3-210ENST00000485424 DPEP3Q9H4B8 488 aa14.09□□□□□ -0.15
UBA3-210ENST00000485424 GCNT4Q9P109 453 aa14.09□□□□□ -0.15
UBA3-210ENST00000485424 USP25Q9UHP3 1055 aa14.09□□□□□ -0.15
UBA3-210ENST00000485424 FRMD4BQ9Y2L6 1034 aa14.09□□□□□ -0.15
UBA3-210ENST00000485424 PCDHGA5Q9Y5G8 931 aa14.09□□□□□ -0.15
UBA3-210ENST00000485424 PCDH15Q96QU1 1955 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms