RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 O00370 1275 aa18.8■□□□□ 0.6
SREBF1-213ENST00000485080 TPM2P07951 284 aa18.8■□□□□ 0.6
SREBF1-213ENST00000485080 ZDHHC11BP0C7U3 371 aa18.8■□□□□ 0.6
SREBF1-213ENST00000485080 RFX1P22670 979 aa18.8■□□□□ 0.6
SREBF1-213ENST00000485080 PDE6CP51160 858 aa18.8■□□□□ 0.6
SREBF1-213ENST00000485080 KCNMA1Q12791 1236 aa18.8■□□□□ 0.6
SREBF1-213ENST00000485080 TAF10Q12962 218 aa18.8■□□□□ 0.6
SREBF1-213ENST00000485080 CNGA2Q16280 664 aa18.8■□□□□ 0.6
SREBF1-213ENST00000485080 MEA1Q16626 185 aa18.8■□□□□ 0.6
SREBF1-213ENST00000485080 MFSD6LQ8IWD5 586 aa18.8■□□□□ 0.6
SREBF1-213ENST00000485080 DHX40Q8IX18 779 aaKnown RBP18.8■□□□□ 0.6
SREBF1-213ENST00000485080 RBBP8NLQ8NC74 664 aaPredicted RBP18.8■□□□□ 0.6
SREBF1-213ENST00000485080 SCAMP5Q8TAC9 235 aa18.8■□□□□ 0.6
SREBF1-213ENST00000485080 SHC3Q92529 594 aa18.8■□□□□ 0.6
SREBF1-213ENST00000485080 ASIC4Q96FT7 647 aa18.8■□□□□ 0.6
SREBF1-213ENST00000485080 KXD1Q9BQD3 176 aa18.8■□□□□ 0.6
SREBF1-213ENST00000485080 C11orf16Q9NQ32 467 aa18.8■□□□□ 0.6
SREBF1-213ENST00000485080 TAB2Q9NYJ8 693 aa18.8■□□□□ 0.6
SREBF1-213ENST00000485080 WNT16Q9UBV4 365 aa18.8■□□□□ 0.6
SREBF1-213ENST00000485080 SYCE3A1L190 88 aa18.79■□□□□ 0.6
SREBF1-213ENST00000485080 PSMC3P17980 439 aa18.79■□□□□ 0.6
SREBF1-213ENST00000485080 ZNF165P49910 485 aa18.79■□□□□ 0.6
SREBF1-213ENST00000485080 KIF11P52732 1056 aa18.79■□□□□ 0.6
SREBF1-213ENST00000485080 SLC8A3P57103 927 aa18.79■□□□□ 0.6
SREBF1-213ENST00000485080 FCHO2Q0JRZ9 810 aa18.79■□□□□ 0.6
SREBF1-213ENST00000485080 PKDCCQ504Y2 493 aa18.79■□□□□ 0.6
SREBF1-213ENST00000485080 TXNDC8Q6A555 127 aa18.79■□□□□ 0.6
SREBF1-213ENST00000485080 APTXQ7Z2E3 356 aaKnown RBP18.79■□□□□ 0.6
SREBF1-213ENST00000485080 TTC30AQ86WT1 665 aa18.79■□□□□ 0.6
SREBF1-213ENST00000485080 AOPEPQ8N6M6 819 aa18.79■□□□□ 0.6
SREBF1-213ENST00000485080 PLA2G2FQ9BZM2 168 aa18.79■□□□□ 0.6
SREBF1-213ENST00000485080 KIF9Q9HAQ2 790 aa18.79■□□□□ 0.6
SREBF1-213ENST00000485080 PLCB1Q9NQ66 1216 aa18.79■□□□□ 0.6
SREBF1-213ENST00000485080 TRPV5Q9NQA5 729 aa18.79■□□□□ 0.6
SREBF1-213ENST00000485080 TSPAN16Q9UKR8 245 aa18.79■□□□□ 0.6
SREBF1-213ENST00000485080 SCML2Q9UQR0 700 aa18.79■□□□□ 0.6
SREBF1-213ENST00000485080 USP3Q9Y6I4 520 aa18.79■□□□□ 0.6
SREBF1-213ENST00000485080 TMEM221A6NGB7 291 aa18.78■□□□□ 0.6
SREBF1-213ENST00000485080 HEPACAM2A8MVW5 462 aa18.78■□□□□ 0.6
SREBF1-213ENST00000485080 M0R296 226 aa18.78■□□□□ 0.6
SREBF1-213ENST00000485080 NARSO43776 548 aaKnown RBP18.78■□□□□ 0.6
SREBF1-213ENST00000485080 OLFM2O95897 454 aa18.78■□□□□ 0.6
SREBF1-213ENST00000485080 CD19P15391 556 aa18.78■□□□□ 0.6
SREBF1-213ENST00000485080 TCF3P15923 654 aa18.78■□□□□ 0.6
SREBF1-213ENST00000485080 AVPR1AP37288 418 aa18.78■□□□□ 0.6
SREBF1-213ENST00000485080 VIPR2P41587 438 aa18.78■□□□□ 0.6
SREBF1-213ENST00000485080 TUBP50607 506 aa18.78■□□□□ 0.6
SREBF1-213ENST00000485080 COPB1P53618 953 aaKnown RBP18.78■□□□□ 0.6
SREBF1-213ENST00000485080 BCAT1P54687 386 aa18.78■□□□□ 0.6
SREBF1-213ENST00000485080 PFKPQ01813 784 aa18.78■□□□□ 0.6
SREBF1-213ENST00000485080 IQCB1Q15051 598 aa18.78■□□□□ 0.6
SREBF1-213ENST00000485080 ZSCAN23Q3MJ62 389 aa18.78■□□□□ 0.6
SREBF1-213ENST00000485080 RAB41Q5JT25 222 aa18.78■□□□□ 0.6
SREBF1-213ENST00000485080 VITQ6UXI7 678 aa18.78■□□□□ 0.6
SREBF1-213ENST00000485080 CELF5Q8N6W0 485 aaKnown RBP18.78■□□□□ 0.6
SREBF1-213ENST00000485080 KIAA1958Q8N8K9 716 aa18.78■□□□□ 0.6
SREBF1-213ENST00000485080 MAB21L3Q8N8X9 362 aa18.78■□□□□ 0.6
SREBF1-213ENST00000485080 TFAP2BQ92481 460 aa18.78■□□□□ 0.6
SREBF1-213ENST00000485080 FBXO32Q969P5 355 aa18.78■□□□□ 0.6
SREBF1-213ENST00000485080 RSPRY1Q96DX4 576 aa18.78■□□□□ 0.6
SREBF1-213ENST00000485080 SMOC2Q9H3U7 446 aa18.78■□□□□ 0.6
SREBF1-213ENST00000485080 HESX1Q9UBX0 185 aa18.78■□□□□ 0.6
SREBF1-213ENST00000485080 DAAM1Q9Y4D1 1078 aa18.78■□□□□ 0.6
SREBF1-213ENST00000485080 TRAV19A0A0A6YYK7 116 aa18.77■□□□□ 0.6
SREBF1-213ENST00000485080 LGALS16A8MUM7 142 aa18.77■□□□□ 0.6
SREBF1-213ENST00000485080 PRR33A8MZF0 331 aa18.77■□□□□ 0.6
SREBF1-213ENST00000485080 XPO1O14980 1071 aaKnown RBP18.77■□□□□ 0.6
SREBF1-213ENST00000485080 PRAMEF12O95522 483 aa18.77■□□□□ 0.6
SREBF1-213ENST00000485080 OAS1P00973 400 aaKnown RBP18.77■□□□□ 0.6
SREBF1-213ENST00000485080 SETSIPP0DME0 302 aa18.77■□□□□ 0.6
SREBF1-213ENST00000485080 GPC5P78333 572 aa18.77■□□□□ 0.6
SREBF1-213ENST00000485080 BST2Q10589 180 aaKnown RBP18.77■□□□□ 0.6
SREBF1-213ENST00000485080 TMEM31Q5JXX7 168 aa18.77■□□□□ 0.6
SREBF1-213ENST00000485080 FKBP15Q5T1M5 1219 aa18.77■□□□□ 0.6
SREBF1-213ENST00000485080 KLHDC7AQ5VTJ3 777 aa18.77■□□□□ 0.6
SREBF1-213ENST00000485080 GJB7Q6PEY0 223 aa18.77■□□□□ 0.6
SREBF1-213ENST00000485080 CCDC186Q7Z3E2 898 aa18.77■□□□□ 0.6
SREBF1-213ENST00000485080 ZNF276Q8N554 614 aa18.77■□□□□ 0.6
SREBF1-213ENST00000485080 DNASE1L2Q92874 299 aa18.77■□□□□ 0.6
SREBF1-213ENST00000485080 USP13Q92995 863 aaPredicted RBP18.77■□□□□ 0.6
SREBF1-213ENST00000485080 ZSWIM1Q9BR11 485 aa18.77■□□□□ 0.6
SREBF1-213ENST00000485080 TRMT61BQ9BVS5 477 aaKnown RBP18.77■□□□□ 0.6
SREBF1-213ENST00000485080 NAA15Q9BXJ9 866 aaKnown RBP18.77■□□□□ 0.6
SREBF1-213ENST00000485080 VPS16Q9H269 839 aa18.77■□□□□ 0.6
SREBF1-213ENST00000485080 TDP1Q9NUW8 608 aa18.77■□□□□ 0.6
SREBF1-213ENST00000485080 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.77■□□□□ 0.6
SREBF1-213ENST00000485080 BECN2A8MW95 431 aa18.76■□□□□ 0.59
SREBF1-213ENST00000485080 PES1O00541 588 aaKnown RBP18.76■□□□□ 0.59
SREBF1-213ENST00000485080 USP17L7P0C7H9 530 aa18.76■□□□□ 0.59
SREBF1-213ENST00000485080 KRT5P13647 590 aa18.76■□□□□ 0.59
SREBF1-213ENST00000485080 CDK11BP21127 795 aaKnown RBP18.76■□□□□ 0.59
SREBF1-213ENST00000485080 PLA2G4AP47712 749 aa18.76■□□□□ 0.59
SREBF1-213ENST00000485080 SLC7A9P82251 487 aa18.76■□□□□ 0.59
SREBF1-213ENST00000485080 APBA1Q02410 837 aa18.76■□□□□ 0.59
SREBF1-213ENST00000485080 GOLGA7BQ2TAP0 167 aa18.76■□□□□ 0.59
SREBF1-213ENST00000485080 GPRIN1Q7Z2K8 1008 aa18.76■□□□□ 0.59
SREBF1-213ENST00000485080 PIGZQ86VD9 579 aa18.76■□□□□ 0.59
SREBF1-213ENST00000485080 ST13P5Q8NFI4 369 aaPredicted RBP18.76■□□□□ 0.59
SREBF1-213ENST00000485080 KCTD13Q8WZ19 329 aa18.76■□□□□ 0.59
SREBF1-213ENST00000485080 LRRC3BQ96PB8 259 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms