RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 ABL1P00519 1130 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 CKMP06732 381 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 HDCP19113 662 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 YWHAQP27348 245 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 ADORA2BP29275 332 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 RPS9P46781 194 aaKnown RBP13.68□□□□□ -0.22
HDAC1-209ENST00000484305 PPP3CCP48454 512 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 STX17P56962 302 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 ZNF77Q15935 545 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 WDR44Q5JSH3 913 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 TXNDC11Q6PKC3 985 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 FILIP1Q7Z7B0 1213 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 MAML2Q8IZL2 1156 aaPredicted RBP13.68□□□□□ -0.22
HDAC1-209ENST00000484305 TTC16Q8NEE8 873 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 CEP63Q96MT8 703 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 ARID3AQ99856 593 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 RNF38Q9H0F5 515 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 EBF3Q9H4W6 596 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 HPS4Q9NQG7 708 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 SPATA6Q9NWH7 488 aaPredicted RBP13.68□□□□□ -0.22
HDAC1-209ENST00000484305 CTNND2Q9UQB3 1225 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 COQ4Q9Y3A0 265 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 MYO15AQ9UKN7 3530 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 FANCMQ8IYD8 2048 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 MYO16Q9Y6X6 1858 aa13.67□□□□□ -0.22
HDAC1-209ENST00000484305 RTN3O95197 1032 aaPredicted RBP13.67□□□□□ -0.22
HDAC1-209ENST00000484305 ARSAP15289 507 aa13.67□□□□□ -0.22
HDAC1-209ENST00000484305 CTHP32929 405 aa13.67□□□□□ -0.22
HDAC1-209ENST00000484305 NBL1P41271 181 aa13.67□□□□□ -0.22
HDAC1-209ENST00000484305 MAGEA9P43362 315 aa13.67□□□□□ -0.22
HDAC1-209ENST00000484305 SLC5A3P53794 718 aa13.67□□□□□ -0.22
HDAC1-209ENST00000484305 MAP3K7CLP57077 242 aa13.67□□□□□ -0.22
HDAC1-209ENST00000484305 ZXDBP98169 803 aa13.67□□□□□ -0.22
HDAC1-209ENST00000484305 USP4Q13107 963 aa13.67□□□□□ -0.22
HDAC1-209ENST00000484305 MTF1Q14872 753 aa13.67□□□□□ -0.22
HDAC1-209ENST00000484305 ITPRIPL2Q3MIP1 535 aa13.67□□□□□ -0.22
HDAC1-209ENST00000484305 CCDC40Q4G0X9 1142 aa13.67□□□□□ -0.22
HDAC1-209ENST00000484305 ZNF394Q53GI3 561 aa13.67□□□□□ -0.22
HDAC1-209ENST00000484305 CC2D1AQ6P1N0 951 aaPredicted RBP13.67□□□□□ -0.22
HDAC1-209ENST00000484305 FRMD5Q7Z6J6 570 aa13.67□□□□□ -0.22
HDAC1-209ENST00000484305 RALGPS2Q86X27 583 aaPredicted RBP13.67□□□□□ -0.22
HDAC1-209ENST00000484305 SH3RF2Q8TEC5 729 aa13.67□□□□□ -0.22
HDAC1-209ENST00000484305 FBXO32Q969P5 355 aa13.67□□□□□ -0.22
HDAC1-209ENST00000484305 CYFIP2Q96F07 1278 aa13.67□□□□□ -0.22
HDAC1-209ENST00000484305 SLITRK1Q96PX8 696 aa13.67□□□□□ -0.22
HDAC1-209ENST00000484305 HNRNPABQ99729 332 aaKnown RBP13.67□□□□□ -0.22
HDAC1-209ENST00000484305 LMAN1LQ9HAT1 526 aa13.67□□□□□ -0.22
HDAC1-209ENST00000484305 METTL14Q9HCE5 456 aaKnown RBP13.67□□□□□ -0.22
HDAC1-209ENST00000484305 CSNK1G1Q9HCP0 422 aa13.67□□□□□ -0.22
HDAC1-209ENST00000484305 CISHQ9NSE2 258 aa13.67□□□□□ -0.22
HDAC1-209ENST00000484305 IL37Q9NZH6 218 aa13.67□□□□□ -0.22
HDAC1-209ENST00000484305 KIAA1468Q9P260 1216 aa13.67□□□□□ -0.22
HDAC1-209ENST00000484305 CHORDC1Q9UHD1 332 aaPredicted RBP13.67□□□□□ -0.22
HDAC1-209ENST00000484305 BICDL2A1A5D9 508 aa13.66□□□□□ -0.22
HDAC1-209ENST00000484305 PROB1E7EW31 1015 aa13.66□□□□□ -0.22
HDAC1-209ENST00000484305 OAS1P00973 400 aaKnown RBP13.66□□□□□ -0.22
HDAC1-209ENST00000484305 SP9P0CG40 484 aa13.66□□□□□ -0.22
HDAC1-209ENST00000484305 CHRNB1P11230 501 aa13.66□□□□□ -0.22
HDAC1-209ENST00000484305 PFKLP17858 780 aa13.66□□□□□ -0.22
HDAC1-209ENST00000484305 TRIM21P19474 475 aaKnown RBP13.66□□□□□ -0.22
HDAC1-209ENST00000484305 FMO5P49326 533 aa13.66□□□□□ -0.22
HDAC1-209ENST00000484305 PDE6CP51160 858 aa13.66□□□□□ -0.22
HDAC1-209ENST00000484305 MTAPQ13126 283 aa13.66□□□□□ -0.22
HDAC1-209ENST00000484305 PAK1Q13153 545 aa13.66□□□□□ -0.22
HDAC1-209ENST00000484305 RUNX3Q13761 415 aa13.66□□□□□ -0.22
HDAC1-209ENST00000484305 PON2Q15165 354 aa13.66□□□□□ -0.22
HDAC1-209ENST00000484305 FOXR2Q6PJQ5 311 aa13.66□□□□□ -0.22
HDAC1-209ENST00000484305 CLEC20AQ6ZU45 233 aa13.66□□□□□ -0.22
HDAC1-209ENST00000484305 GPRIN1Q7Z2K8 1008 aa13.66□□□□□ -0.22
HDAC1-209ENST00000484305 TRIML1Q8N9V2 468 aa13.66□□□□□ -0.22
HDAC1-209ENST00000484305 OVCA2Q8WZ82 227 aa13.66□□□□□ -0.22
HDAC1-209ENST00000484305 CHFRQ96EP1 664 aa13.66□□□□□ -0.22
HDAC1-209ENST00000484305 MSANTD3Q96H12 275 aa13.66□□□□□ -0.22
HDAC1-209ENST00000484305 FAXDC2Q96IV6 333 aa13.66□□□□□ -0.22
HDAC1-209ENST00000484305 HEXIM2Q96MH2 286 aaKnown RBP13.66□□□□□ -0.22
HDAC1-209ENST00000484305 RBM12Q9NTZ6 932 aaKnown RBP13.66□□□□□ -0.22
HDAC1-209ENST00000484305 ARHGAP26Q9UNA1 814 aa13.66□□□□□ -0.22
HDAC1-209ENST00000484305 ATG2BQ96BY7 2078 aa13.66□□□□□ -0.22
HDAC1-209ENST00000484305 DMDP11532 3685 aa13.66□□□□□ -0.22
HDAC1-209ENST00000484305 ZFHX2Q9C0A1 2572 aaPredicted RBP13.65□□□□□ -0.22
HDAC1-209ENST00000484305 FAM92AA1XBS5 289 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 HHLA1C9JL84 531 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 LEFTY2O00292 366 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 LAMTOR5O43504 91 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 ABCB7O75027 752 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 OLFM2O95897 454 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 FAM200BP0CF97 657 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 TCF3P15923 654 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 PGFP49763 221 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 RAD23BP54727 409 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 SLC7A9P82251 487 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 LRMPQ12912 555 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 PDGFRLQ15198 375 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 PPP1R26Q5T8A7 1209 aaPredicted RBP13.65□□□□□ -0.22
HDAC1-209ENST00000484305 C1orf228Q6PIY5 440 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 SLC4A11Q8NBS3 891 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 PDZD8Q8NEN9 1154 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 OSCP1Q8WVF1 389 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 JAKMIP2Q96AA8 810 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 SRRTQ9BXP5 876 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms