RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 TFF2Q03403 129 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 YWHAHQ04917 246 aaPredicted RBP9.58□□□□□ -0.88
COL8A1-207ENST00000483969 ENPEPQ07075 957 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 MYO1EQ12965 1108 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 RAB33AQ14088 237 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 MORC3Q14149 939 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 MRPL58Q14197 206 aaKnown RBP9.58□□□□□ -0.88
COL8A1-207ENST00000483969 CENPPQ6IPU0 288 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 CES5AQ6NT32 575 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 PRSS55Q6UWB4 352 aaPredicted RBP9.58□□□□□ -0.88
COL8A1-207ENST00000483969 TRAPPC11Q7Z392 1133 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 PALB2Q86YC2 1186 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 SMYD4Q8IYR2 804 aaPredicted RBP9.58□□□□□ -0.88
COL8A1-207ENST00000483969 THEM5Q8N1Q8 247 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 LRRC52Q8N7C0 313 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.58□□□□□ -0.88
COL8A1-207ENST00000483969 PARD3BQ8TEW8 1205 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 MSLNLQ96KJ4 702 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 SENP8Q96LD8 212 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 CGRRF1Q99675 332 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 CLSTN3Q9BQT9 956 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 CLEC1BQ9P126 229 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 MTRRQ9UBK8 725 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 POLIQ9UNA4 740 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 PTPRSQ13332 1948 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 LAMA3Q16787 3333 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 LOC100289279A0A1B0GTE1 492 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 BICDL2A1A5D9 508 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 BIN1O00499 593 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 CYB561D2O14569 222 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 IKBKBO14920 756 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 EREGO14944 169 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 TNFRSF21O75509 655 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 OAZ2O95190 189 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 TIAF1O95411 115 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 GLP2RO95838 553 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 EPCAMP16422 314 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 CCNE1P24864 410 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 POLR2BP30876 1174 aaKnown RBP9.57□□□□□ -0.88
COL8A1-207ENST00000483969 ATICP31939 592 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 ELF1P32519 619 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 OR1D2P34982 312 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 LRRC63Q05C16 580 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 ITIH3Q06033 890 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 DLX2Q07687 328 aaPredicted RBP9.57□□□□□ -0.88
COL8A1-207ENST00000483969 SMAD4Q13485 552 aaKnown RBP9.57□□□□□ -0.88
COL8A1-207ENST00000483969 TRPC3Q13507 836 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 CTXN3Q4LDR2 81 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 SGO2Q562F6 1265 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 ATAT1Q5SQI0 421 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 ANKRD40Q6AI12 368 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 ZNF280DQ6N043 979 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 LILRA6Q6PI73 481 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 CYP26C1Q6V0L0 522 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 INTS8Q75QN2 995 aaKnown RBP9.57□□□□□ -0.88
COL8A1-207ENST00000483969 RTL10Q7L3V2 364 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 DPH6Q7L8W6 267 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 FAM186BQ8IYM0 893 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 KREMEN2Q8NCW0 462 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 VN1R2Q8NFZ6 395 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 OR5B17Q8NGF7 314 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 BORCS6Q96GS4 357 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 NUP62CLQ9H1M0 184 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 CLSTN2Q9H4D0 955 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 MAFFQ9ULX9 164 aa9.57□□□□□ -0.88
COL8A1-207ENST00000483969 BARX2Q9UMQ3 279 aaPredicted RBP9.57□□□□□ -0.88
COL8A1-207ENST00000483969 OR6C75A6NL08 312 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 PPEF2O14830 753 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 MBTPS2O43462 519 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 TGM5O43548 720 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 STX10O60499 249 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 HUS1O60921 280 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 TBX10O75333 385 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 AKAP3O75969 853 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 FGFR1OPO95684 399 aaKnown RBP9.56□□□□□ -0.88
COL8A1-207ENST00000483969 MBD3O95983 291 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 CYP11A1P05108 521 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 FAM163BP0C2L3 166 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 EPB41P11171 864 aaKnown RBP9.56□□□□□ -0.88
COL8A1-207ENST00000483969 RPL17P18621 184 aaKnown RBP9.56□□□□□ -0.88
COL8A1-207ENST00000483969 CASP4P49662 377 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 VAMP7P51809 220 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 ARPP19P56211 112 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 BFSP1Q12934 665 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 CLUL1Q15846 466 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 ZCWPW2Q504Y3 356 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 TPGS2Q68CL5 300 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 HGSNATQ68CP4 663 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 LMBRD2Q68DH5 695 aaPredicted RBP9.56□□□□□ -0.88
COL8A1-207ENST00000483969 OVOS1Q6IE37 1185 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 SLC8B1Q6J4K2 584 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 SYCE2Q6PIF2 218 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 FOXR2Q6PJQ5 311 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 FILIP1Q7Z7B0 1213 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 GLYCTKQ8IVS8 523 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 TMEM86AQ8N2M4 240 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 MLKLQ8NB16 471 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 ZNF461Q8TAF7 563 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 HPDLQ96IR7 371 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 RIPOR3Q96MK2 946 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms