RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 ZMAT2Q96NC0 199 aaKnown RBP5.72□□□□□ -1.49
COL17A1-206ENST00000483876 SAMD11Q96NU1 681 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 NCAPGQ9BPX3 1015 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 LRRC1Q9BTT6 524 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 VIPAS39Q9H9C1 493 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 CYLDQ9NQC7 956 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.72□□□□□ -1.49
COL17A1-206ENST00000483876 OGFRQ9NZT2 677 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 STIM2Q9P246 746 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 FEZ2Q9UHY8 353 aaPredicted RBP5.72□□□□□ -1.49
COL17A1-206ENST00000483876 USP18Q9UMW8 372 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 ST3GAL5Q9UNP4 418 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 SORCS3Q9UPU3 1222 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 PIN4Q9Y237 131 aaKnown RBP5.72□□□□□ -1.49
COL17A1-206ENST00000483876 GINS2Q9Y248 185 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 GIT1Q9Y2X7 761 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 NOC2LQ9Y3T9 749 aaKnown RBP5.72□□□□□ -1.49
COL17A1-206ENST00000483876 USP15Q9Y4E8 981 aaPredicted RBP5.72□□□□□ -1.49
COL17A1-206ENST00000483876 IPPQ9Y573 584 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 CDY2AQ9Y6F7 541 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 SCN10AQ9Y5Y9 1956 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 USP9XQ93008 2570 aaPredicted RBP5.72□□□□□ -1.49
COL17A1-206ENST00000483876 HELZ2Q9BYK8 2649 aaKnown RBP5.72□□□□□ -1.49
COL17A1-206ENST00000483876 GRIN2DO15399 1336 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 GOLGA6L10A0A0M3HER8 536 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 A0A0U1RQF3 1178 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 BHMG1C9JSJ3 638 aaPredicted RBP5.71□□□□□ -1.5
COL17A1-206ENST00000483876 O00370 1275 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 SLC30A4O14863 429 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 INPPL1O15357 1258 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 SART1O43290 800 aaKnown RBP5.71□□□□□ -1.5
COL17A1-206ENST00000483876 PSTPIP1O43586 416 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 SPOPO43791 374 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 RECQL4O94761 1208 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 EOMESO95936 686 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 FGGP02679 453 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 CFHP08603 1231 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 RHOXF2BP0C7M4 288 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 ITGA4P13612 1032 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 CD58P19256 250 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 FGFR4P22455 802 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 CHRNA3P32297 505 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 GBP1P32455 592 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 SCNN1AP37088 669 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 CETN2P41208 172 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 RPL34P49207 117 aaKnown RBP5.71□□□□□ -1.5
COL17A1-206ENST00000483876 TAF6P49848 677 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 NDST1P52848 882 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 CDH8P55286 799 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 COPS2P61201 443 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 VSNL1P62760 191 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 FAM189BP81408 668 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 NNTQ13423 1086 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 ADAM15Q13444 863 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 CUL1Q13616 776 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 DSC3Q14574 896 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 CYP1B1Q16678 543 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 LONRF2Q1L5Z9 754 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 TRIM71Q2Q1W2 868 aaKnown RBP5.71□□□□□ -1.5
COL17A1-206ENST00000483876 SV2CQ496J9 727 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 PKDCCQ504Y2 493 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 FBXO47Q5MNV8 452 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 N4BP2L1Q5TBK1 243 aaPredicted RBP5.71□□□□□ -1.5
COL17A1-206ENST00000483876 CWF19L1Q69YN2 538 aaKnown RBP5.71□□□□□ -1.5
COL17A1-206ENST00000483876 TWF2Q6IBS0 349 aaKnown RBP5.71□□□□□ -1.5
COL17A1-206ENST00000483876 C8orf74Q6P047 294 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 FAM117BQ6P1L5 589 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 EMBQ6PCB8 327 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 MMS22LQ6ZRQ5 1243 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 ARCQ7LC44 396 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 TMEM110Q86TL2 294 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 FAM228AQ86W67 206 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 ZDHHC17Q8IUH5 632 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 RHOT1Q8IXI2 618 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 TMEFF1Q8IYR6 380 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 KATNAL2Q8IYT4 538 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 RCOR2Q8IZ40 523 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 TMEM86AQ8N2M4 240 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 SMRP1Q8NCR6 262 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 EXD1Q8NHP7 514 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 RIN2Q8WYP3 895 aaPredicted RBP5.71□□□□□ -1.5
COL17A1-206ENST00000483876 PIK3R5Q8WYR1 880 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 SEC14L1Q92503 715 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 ALG3Q92685 438 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 SLCO2A1Q92959 643 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 PGBD4Q96DM1 585 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 DDX27Q96GQ7 796 aaKnown RBP5.71□□□□□ -1.5
COL17A1-206ENST00000483876 MS4A14Q96JA4 679 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 TNIP3Q96KP6 325 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 HEXIM2Q96MH2 286 aaKnown RBP5.71□□□□□ -1.5
COL17A1-206ENST00000483876 PPP1R10Q96QC0 940 aaKnown RBP5.71□□□□□ -1.5
COL17A1-206ENST00000483876 PPP1R16BQ96T49 567 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 PNKPQ96T60 521 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 RTP3Q9BQQ7 232 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 RHOXF2Q9BQY4 288 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 C11orf70Q9BRQ4 267 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 FUT8Q9BYC5 575 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 FAM129AQ9BZQ8 928 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 UBXN6Q9BZV1 441 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 ELOVL4Q9GZR5 314 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms