RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 TICRRQ7Z2Z1 1910 aa19.04■□□□□ 0.64
HDAC6-225ENST00000483506 C2orf78A6NCI8 922 aa19.04■□□□□ 0.64
HDAC6-225ENST00000483506 DPYSL4O14531 572 aa19.04■□□□□ 0.64
HDAC6-225ENST00000483506 OAS1P00973 400 aaKnown RBP19.04■□□□□ 0.64
HDAC6-225ENST00000483506 PAEPP09466 180 aa19.04■□□□□ 0.64
HDAC6-225ENST00000483506 USP17L7P0C7H9 530 aa19.04■□□□□ 0.64
HDAC6-225ENST00000483506 ZDHHC11BP0C7U3 371 aa19.04■□□□□ 0.64
HDAC6-225ENST00000483506 MTIF2P46199 727 aaKnown RBP19.04■□□□□ 0.64
HDAC6-225ENST00000483506 ZNF132P52740 706 aa19.04■□□□□ 0.64
HDAC6-225ENST00000483506 MLLT6P55198 1093 aaPredicted RBP19.04■□□□□ 0.64
HDAC6-225ENST00000483506 MLF2Q15773 248 aaPredicted RBP19.04■□□□□ 0.64
HDAC6-225ENST00000483506 STX1AQ16623 288 aa19.04■□□□□ 0.64
HDAC6-225ENST00000483506 ARHGAP29Q52LW3 1261 aa19.04■□□□□ 0.64
HDAC6-225ENST00000483506 SLC44A4Q53GD3 710 aa19.04■□□□□ 0.64
HDAC6-225ENST00000483506 MIIPQ5JXC2 388 aa19.04■□□□□ 0.64
HDAC6-225ENST00000483506 IER5LQ5T953 404 aa19.04■□□□□ 0.64
HDAC6-225ENST00000483506 ASTLQ6HA08 431 aaPredicted RBP19.04■□□□□ 0.64
HDAC6-225ENST00000483506 BPIFB1Q8TDL5 484 aa19.04■□□□□ 0.64
HDAC6-225ENST00000483506 KAT5Q92993 513 aa19.04■□□□□ 0.64
HDAC6-225ENST00000483506 FBXO32Q969P5 355 aa19.04■□□□□ 0.64
HDAC6-225ENST00000483506 SHDQ96IW2 340 aa19.04■□□□□ 0.64
HDAC6-225ENST00000483506 KREMEN1Q96MU8 473 aa19.04■□□□□ 0.64
HDAC6-225ENST00000483506 SLC22A12Q96S37 553 aa19.04■□□□□ 0.64
HDAC6-225ENST00000483506 UBXN6Q9BZV1 441 aa19.04■□□□□ 0.64
HDAC6-225ENST00000483506 SMG9Q9H0W8 520 aaKnown RBP19.04■□□□□ 0.64
HDAC6-225ENST00000483506 MFSD1Q9H3U5 465 aa19.04■□□□□ 0.64
HDAC6-225ENST00000483506 FBXO44Q9H4M3 255 aa19.04■□□□□ 0.64
HDAC6-225ENST00000483506 CCL26Q9Y258 94 aa19.04■□□□□ 0.64
HDAC6-225ENST00000483506 NFE2L3Q9Y4A8 694 aa19.04■□□□□ 0.64
HDAC6-225ENST00000483506 MUC6Q6W4X9 2439 aa19.04■□□□□ 0.64
HDAC6-225ENST00000483506 F5P12259 2224 aa19.03■□□□□ 0.64
HDAC6-225ENST00000483506 ZNF263O14978 683 aa19.03■□□□□ 0.64
HDAC6-225ENST00000483506 AOC1P19801 751 aa19.03■□□□□ 0.64
HDAC6-225ENST00000483506 COL9A1P20849 921 aa19.03■□□□□ 0.64
HDAC6-225ENST00000483506 EEF1GP26641 437 aaKnown RBP19.03■□□□□ 0.64
HDAC6-225ENST00000483506 TUBP50607 506 aa19.03■□□□□ 0.64
HDAC6-225ENST00000483506 NUBP1P53384 320 aa19.03■□□□□ 0.64
HDAC6-225ENST00000483506 VCPP55072 806 aaKnown RBP19.03■□□□□ 0.64
HDAC6-225ENST00000483506 SLC7A9P82251 487 aa19.03■□□□□ 0.64
HDAC6-225ENST00000483506 PLCB2Q00722 1185 aa19.03■□□□□ 0.64
HDAC6-225ENST00000483506 USP4Q13107 963 aa19.03■□□□□ 0.64
HDAC6-225ENST00000483506 CDKAL1Q5VV42 579 aa19.03■□□□□ 0.64
HDAC6-225ENST00000483506 TMEM270Q6UE05 265 aa19.03■□□□□ 0.64
HDAC6-225ENST00000483506 GBP6Q6ZN66 633 aa19.03■□□□□ 0.64
HDAC6-225ENST00000483506 ENOSF1Q7L5Y1 443 aa19.03■□□□□ 0.64
HDAC6-225ENST00000483506 ANKRD52Q8NB46 1076 aa19.03■□□□□ 0.64
HDAC6-225ENST00000483506 FAM81BQ96LP2 452 aa19.03■□□□□ 0.64
HDAC6-225ENST00000483506 TUBGCP2Q9BSJ2 902 aa19.03■□□□□ 0.64
HDAC6-225ENST00000483506 KCNH6Q9H252 994 aa19.03■□□□□ 0.64
HDAC6-225ENST00000483506 TBC1D17Q9HA65 648 aa19.03■□□□□ 0.64
HDAC6-225ENST00000483506 TRPC7Q9HCX4 862 aa19.03■□□□□ 0.64
HDAC6-225ENST00000483506 SAMSN1Q9NSI8 373 aaKnown RBP19.03■□□□□ 0.64
HDAC6-225ENST00000483506 ARHGAP26Q9UNA1 814 aa19.03■□□□□ 0.64
HDAC6-225ENST00000483506 ARIH1Q9Y4X5 557 aaPredicted RBP19.03■□□□□ 0.64
HDAC6-225ENST00000483506 MYO16Q9Y6X6 1858 aa19.03■□□□□ 0.64
HDAC6-225ENST00000483506 SHISA7A6NL88 538 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 KCNJ18B7U540 433 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 CKMP06732 381 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 VDRP11473 427 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 HDCP19113 662 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 AVPR2P30518 371 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 KIF11P52732 1056 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 KCNJ12Q14500 433 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 ZNF77Q15935 545 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 EXOC3L4Q17RC7 722 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 VWA3BQ502W6 1294 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 SGO2Q562F6 1265 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 TCP11X2Q5H9J9 407 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 C11orf57Q6ZUT1 292 aaPredicted RBP19.02■□□□□ 0.64
HDAC6-225ENST00000483506 RRAGAQ7L523 313 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 GPRIN1Q7Z2K8 1008 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 TTC30AQ86WT1 665 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 CREBRFQ8IUR6 639 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 GPIHBP1Q8IV16 184 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 YAF2Q8IY57 180 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 KIAA1958Q8N8K9 716 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 ARL14EPQ8N8R7 260 aaPredicted RBP19.02■□□□□ 0.64
HDAC6-225ENST00000483506 RIN3Q8TB24 985 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 CYP2S1Q96SQ9 504 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 NDST4Q9H3R1 872 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 SCML2Q9UQR0 700 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 HCN4Q9Y3Q4 1203 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 USP3Q9Y6I4 520 aa19.02■□□□□ 0.64
HDAC6-225ENST00000483506 COL4A3Q01955 1670 aa19.01■□□□□ 0.63
HDAC6-225ENST00000483506 O00370 1275 aa19.01■□□□□ 0.63
HDAC6-225ENST00000483506 GLULP15104 373 aa19.01■□□□□ 0.63
HDAC6-225ENST00000483506 PON1P27169 355 aa19.01■□□□□ 0.63
HDAC6-225ENST00000483506 IFRD2Q12894 506 aaPredicted RBP19.01■□□□□ 0.63
HDAC6-225ENST00000483506 TMEM105Q8N8V8 129 aa19.01■□□□□ 0.63
HDAC6-225ENST00000483506 MSANTD3Q96H12 275 aa19.01■□□□□ 0.63
HDAC6-225ENST00000483506 FAM83CQ9BQN1 747 aa19.01■□□□□ 0.63
HDAC6-225ENST00000483506 CRACR2AQ9BSW2 395 aa19.01■□□□□ 0.63
HDAC6-225ENST00000483506 HEBP1Q9NRV9 189 aa19.01■□□□□ 0.63
HDAC6-225ENST00000483506 THG1LQ9NWX6 298 aaKnown RBP19.01■□□□□ 0.63
HDAC6-225ENST00000483506 APEX2Q9UBZ4 518 aa19.01■□□□□ 0.63
HDAC6-225ENST00000483506 TSPAN16Q9UKR8 245 aa19.01■□□□□ 0.63
HDAC6-225ENST00000483506 PCDHB4Q9Y5E5 795 aa19.01■□□□□ 0.63
HDAC6-225ENST00000483506 RNF225M0QZC1 329 aaPredicted RBP19■□□□□ 0.63
HDAC6-225ENST00000483506 SLC9A1P19634 815 aa19■□□□□ 0.63
HDAC6-225ENST00000483506 BCAT1P54687 386 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms