RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 PDIA5Q14554 519 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 POU4F3Q15319 338 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 FAM78AQ5JUQ0 283 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 PRSS36Q5K4E3 855 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 KRT79Q5XKE5 535 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 C1orf228Q6PIY5 440 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 TSSK4Q6SA08 328 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 MPZL3Q6UWV2 235 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 ALKAL1Q6UXT8 129 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 CCDC81Q6ZN84 652 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 YAF2Q8IY57 180 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 CELF5Q8N6W0 485 aaKnown RBP6.39□□□□□ -1.39
CSDE1-207ENST00000483407 FAM184AQ8NB25 1140 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 RBBP8NLQ8NC74 664 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-207ENST00000483407 NELL1Q92832 810 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 SMARCD2Q92925 531 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 E2F7Q96AV8 911 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 ANAPC16Q96DE5 110 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 MSANTD3Q96H12 275 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 TIPINQ9BVW5 301 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 TARS2Q9BW92 718 aaKnown RBP6.39□□□□□ -1.39
CSDE1-207ENST00000483407 GPR88Q9GZN0 384 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 SLITRK6Q9H5Y7 841 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 C17orf75Q9HAS0 396 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 POLD4Q9HCU8 107 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 ZNF334Q9HCZ1 680 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-207ENST00000483407 PTPRHQ9HD43 1115 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 TRPV5Q9NQA5 729 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 ASAH2Q9NR71 780 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 ARHGAP28Q9P2N2 729 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 AFF4Q9UHB7 1163 aaKnown RBP6.39□□□□□ -1.39
CSDE1-207ENST00000483407 FBXL5Q9UKA1 691 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 LIMCH1Q9UPQ0 1083 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 UNC79Q9P2D8 2635 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 DOCK8Q8NF50 2099 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 TPRP12270 2363 aaKnown RBP6.38□□□□□ -1.39
CSDE1-207ENST00000483407 TLDC2A0PJX2 215 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-207ENST00000483407 GFRA2O00451 464 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 LAD1O00515 517 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 SLC16A4O15374 487 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 XPOTO43592 962 aaKnown RBP6.38□□□□□ -1.39
CSDE1-207ENST00000483407 HIP1RO75146 1068 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 TOM1L1O75674 476 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 SEC24AO95486 1093 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 ECEL1O95672 775 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 IMPDH2P12268 514 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 MYL4P12829 197 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 PROZP22891 400 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 FCARP24071 287 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 MATR3P43243 847 aaKnown RBP eCLIP6.38□□□□□ -1.39
CSDE1-207ENST00000483407 CXCL12P48061 93 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 ATXN1P54253 815 aaKnown RBP6.38□□□□□ -1.39
CSDE1-207ENST00000483407 YWHAHQ04917 246 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-207ENST00000483407 CLCQ05315 142 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 FZD5Q13467 585 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 LRRC32Q14392 662 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 NOLC1Q14978 699 aaKnown RBP eCLIP6.38□□□□□ -1.39
CSDE1-207ENST00000483407 VITQ6UXI7 678 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 GK5Q6ZS86 529 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 USP37Q86T82 979 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 MAP4K3Q8IVH8 894 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 CCDC83Q8IWF9 413 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 FBXO18Q8NFZ0 1043 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 OR6P1Q8NGX9 317 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 ZSCAN18Q8TBC5 510 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-207ENST00000483407 GPBAR1Q8TDU6 330 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 CSGALNACT1Q8TDX6 532 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 C18orf25Q96B23 403 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-207ENST00000483407 TCEAL4Q96EI5 215 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 KLHDC7BQ96G42 594 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 ZMAT2Q96NC0 199 aaKnown RBP6.38□□□□□ -1.39
CSDE1-207ENST00000483407 TBC1D32Q96NH3 1257 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 PSMG3-AS1Q96PY0 264 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 FERD3LQ96RJ6 166 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 LLPHQ9BRT6 129 aaKnown RBP6.38□□□□□ -1.39
CSDE1-207ENST00000483407 RTKNQ9BST9 563 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 KRTAP9-2Q9BYQ4 174 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 LMAN1LQ9HAT1 526 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 PLEKHA5Q9HAU0 1116 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 SIRPGQ9P1W8 387 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 ANKFY1Q9P2R3 1169 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 POLR3KQ9Y2Y1 108 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-207ENST00000483407 PIAS3Q9Y6X2 628 aa6.38□□□□□ -1.39
CSDE1-207ENST00000483407 TDRD15B5MCY1 1934 aaKnown RBP6.38□□□□□ -1.39
CSDE1-207ENST00000483407 ARID2Q68CP9 1835 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 OR6C75A6NL08 312 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 HEPACAM2A8MVW5 462 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 SHISA8B8ZZ34 492 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 E9PMD0 336 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 H0YCG3 227 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 CLDN3O15551 220 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 LRP3O75074 770 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 RETP07949 1114 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 NID1P14543 1247 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 GUCY2CP25092 1073 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 MAOBP27338 520 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 CNR2P34972 360 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 PRPHP41219 470 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 VIPR2P41587 438 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms