RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 SOBPA7XYQ1 873 aa12.83□□□□□ -0.36
HDLBP-239ENST00000483086 HHLA1C9JL84 531 aa12.83□□□□□ -0.36
HDLBP-239ENST00000483086 LAMTOR5O43504 91 aa12.83□□□□□ -0.36
HDLBP-239ENST00000483086 OAS1P00973 400 aaKnown RBP12.83□□□□□ -0.36
HDLBP-239ENST00000483086 CKMP06732 381 aa12.83□□□□□ -0.36
HDLBP-239ENST00000483086 SLC5A3P53794 718 aa12.83□□□□□ -0.36
HDLBP-239ENST00000483086 MESP2Q0VG99 397 aa12.83□□□□□ -0.36
HDLBP-239ENST00000483086 RUNX3Q13761 415 aa12.83□□□□□ -0.36
HDLBP-239ENST00000483086 EML3Q32P44 896 aa12.83□□□□□ -0.36
HDLBP-239ENST00000483086 ITPRIPL2Q3MIP1 535 aa12.83□□□□□ -0.36
HDLBP-239ENST00000483086 FSTL4Q6MZW2 842 aa12.83□□□□□ -0.36
HDLBP-239ENST00000483086 RALGPS2Q86X27 583 aaPredicted RBP12.83□□□□□ -0.36
HDLBP-239ENST00000483086 SUMF1Q8NBK3 374 aa12.83□□□□□ -0.36
HDLBP-239ENST00000483086 TTC16Q8NEE8 873 aa12.83□□□□□ -0.36
HDLBP-239ENST00000483086 SLC2A14Q8TDB8 520 aa12.83□□□□□ -0.36
HDLBP-239ENST00000483086 TATDN2Q93075 761 aa12.83□□□□□ -0.36
HDLBP-239ENST00000483086 NKD2Q969F2 451 aaPredicted RBP12.83□□□□□ -0.36
HDLBP-239ENST00000483086 CCDC47Q96A33 483 aaKnown RBP12.83□□□□□ -0.36
HDLBP-239ENST00000483086 ZFRQ96KR1 1074 aaKnown RBP12.83□□□□□ -0.36
HDLBP-239ENST00000483086 TIGD1Q96MW7 591 aa12.83□□□□□ -0.36
HDLBP-239ENST00000483086 GSDMAQ96QA5 445 aa12.83□□□□□ -0.36
HDLBP-239ENST00000483086 NELL2Q99435 816 aa12.83□□□□□ -0.36
HDLBP-239ENST00000483086 C8orf33Q9H7E9 229 aaPredicted RBP12.83□□□□□ -0.36
HDLBP-239ENST00000483086 TMEM8AQ9HCN3 771 aa12.83□□□□□ -0.36
HDLBP-239ENST00000483086 KRT82Q9NSB4 513 aa12.83□□□□□ -0.36
HDLBP-239ENST00000483086 TRAV19A0A0A6YYK7 116 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 FAM92AA1XBS5 289 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 PPP1R3GB7ZBB8 358 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 K7ESF4 209 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 CILPO75339 1184 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 AP1G2O75843 785 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 USP17L7P0C7H9 530 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 HDCP19113 662 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 CD58P19256 250 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 ANXA13P27216 316 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 PLCB2Q00722 1185 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 ENPEPQ07075 957 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 ZNF528Q3MIS6 628 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 SFTPA1Q8IWL2 248 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 ZBTB44Q8NCP5 570 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 OSCP1Q8WVF1 389 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 TAF4BQ92750 862 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 CEP295NLQ96MC4 621 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 DUSP9Q99956 384 aaKnown RBP12.82□□□□□ -0.36
HDLBP-239ENST00000483086 CCSER2Q9H7U1 834 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 KIF9Q9HAQ2 790 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 CSNK1G1Q9HCP0 422 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 OSER1Q9NX31 292 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 SMPD4Q9NXE4 827 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 CHORDC1Q9UHD1 332 aaPredicted RBP12.82□□□□□ -0.36
HDLBP-239ENST00000483086 FBXO4Q9UKT5 387 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 ARHGAP26Q9UNA1 814 aa12.82□□□□□ -0.36
HDLBP-239ENST00000483086 MRPS17Q9Y2R5 130 aaKnown RBP12.82□□□□□ -0.36
HDLBP-239ENST00000483086 RALGAPA1Q6GYQ0 2036 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 LEFTY2O00292 366 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 LILRB5O75023 590 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 CLSTN1O94985 981 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 KIF20AO95235 890 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 EGFP01133 1207 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 ZDHHC11BP0C7U3 371 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 CHRM1P11229 460 aaPredicted RBP12.81□□□□□ -0.36
HDLBP-239ENST00000483086 TCF3P15923 654 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 RPL13P26373 211 aaKnown RBP12.81□□□□□ -0.36
HDLBP-239ENST00000483086 ADORA2BP29275 332 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 GJA4P35212 333 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 MAGEA9P43362 315 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 MAP3K7CLP57077 242 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 SLC7A9P82251 487 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 TMEM196Q5HYL7 178 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 MAMSTRQ6ZN01 415 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 CLEC20AQ6ZU45 233 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 UNC93AQ86WB7 457 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 NUP93Q8N1F7 819 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 DCLK2Q8N568 766 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 SMARCE1Q969G3 411 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 SLC35C1Q96A29 364 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 MED15Q96RN5 788 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 MED10Q9BTT4 135 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 NIF3L1Q9GZT8 377 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 ECT2Q9H8V3 914 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 DUS2Q9NX74 493 aaKnown RBP12.81□□□□□ -0.36
HDLBP-239ENST00000483086 TRPM5Q9NZQ8 1165 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 GMIPQ9P107 970 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 ZMYM5Q9UJ78 669 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 CPQQ9Y646 472 aa12.81□□□□□ -0.36
HDLBP-239ENST00000483086 GOLGA6L4A6NEF3 574 aa12.8□□□□□ -0.36
HDLBP-239ENST00000483086 BIN1O00499 593 aa12.8□□□□□ -0.36
HDLBP-239ENST00000483086 TRDMT1O14717 391 aaKnown RBP12.8□□□□□ -0.36
HDLBP-239ENST00000483086 CETN3O15182 167 aa12.8□□□□□ -0.36
HDLBP-239ENST00000483086 NCAM2O15394 837 aa12.8□□□□□ -0.36
HDLBP-239ENST00000483086 COCHO43405 550 aa12.8□□□□□ -0.36
HDLBP-239ENST00000483086 KRT13P13646 458 aa12.8□□□□□ -0.36
HDLBP-239ENST00000483086 YWHAQP27348 245 aa12.8□□□□□ -0.36
HDLBP-239ENST00000483086 MXI1P50539 228 aa12.8□□□□□ -0.36
HDLBP-239ENST00000483086 GALK1P51570 392 aa12.8□□□□□ -0.36
HDLBP-239ENST00000483086 SRSF5Q13243 272 aaKnown RBP12.8□□□□□ -0.36
HDLBP-239ENST00000483086 ZNF394Q53GI3 561 aa12.8□□□□□ -0.36
HDLBP-239ENST00000483086 PPP1R26Q5T8A7 1209 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-239ENST00000483086 KRT39Q6A163 491 aa12.8□□□□□ -0.36
HDLBP-239ENST00000483086 TTI2Q6NXR4 508 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms