RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 ULK2Q8IYT8 1036 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 NMD3Q96D46 503 aaKnown RBP14.92□□□□□ -0.02
COL9A2-207ENST00000482722 THTPAQ9BU02 230 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 PCDHA10Q9Y5I2 948 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 hCG_2014768A0A024R1R8 64 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 SGK1O00141 431 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 TM9SF1O15321 606 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 BUD23O43709 281 aaKnown RBP14.92□□□□□ -0.02
COL9A2-207ENST00000482722 RGS20O76081 388 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 ASLP04424 464 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 NR3C2P08235 984 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 DYNLT1P63172 113 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 DEUP1Q05D60 604 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 PRKD1Q15139 912 aaPredicted RBP14.92□□□□□ -0.02
COL9A2-207ENST00000482722 LRRC36Q1X8D7 754 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 TXNRD3NBQ6F5E7 133 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 ACAD11Q709F0 780 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 SATL1Q86VE3 508 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.92□□□□□ -0.02
COL9A2-207ENST00000482722 MZB1Q8WU39 189 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 MFSD14AQ96MC6 490 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 PLEKHG4BQ96PX9 1271 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 SLC7A8Q9UHI5 535 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 ZNF214Q9UL59 606 aaPredicted RBP14.92□□□□□ -0.02
COL9A2-207ENST00000482722 E5RJQ4 531 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 KDSRQ06136 332 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 MAMLD1Q13495 774 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 TRMT5Q32P41 509 aaKnown RBP14.91□□□□□ -0.02
COL9A2-207ENST00000482722 MSS51Q4VC12 460 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 C1orf146Q5VVC0 180 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 CENPUQ71F23 418 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 SHKBP1Q8TBC3 707 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 TTC17Q96AE7 1141 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 PAFAH2Q99487 392 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 ANKEF1Q9NU02 776 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 HSFX1Q9UBD0 423 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 PLA2G4CQ9UP65 541 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 PCDHB4Q9Y5E5 795 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 USP2O75604 605 aaPredicted RBP14.91□□□□□ -0.02
COL9A2-207ENST00000482722 HLA-DRAP01903 254 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 NLRP11P59045 1033 aaKnown RBP14.91□□□□□ -0.02
COL9A2-207ENST00000482722 VGLL4Q14135 290 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 TTLL12Q14166 644 aaPredicted RBP14.91□□□□□ -0.02
COL9A2-207ENST00000482722 DCAF15Q66K64 600 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 NME8Q8N427 588 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 TMC2Q8TDI7 906 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 TMEM143Q96AN5 459 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 MPP4Q96JB8 637 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 ZBTB45Q96K62 511 aaPredicted RBP14.91□□□□□ -0.02
COL9A2-207ENST00000482722 MIS12Q9H081 205 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 POLR3FQ9H1D9 316 aaPredicted RBP14.91□□□□□ -0.02
COL9A2-207ENST00000482722 RHBDL2Q9NX52 303 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 CLIC5Q9NZA1 410 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 RNF181Q9P0P0 153 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 PTPRJQ12913 1337 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 TM7SF2O76062 418 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 TGDSO95455 350 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 GLRA2P23416 452 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 SFNP31947 248 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 PTP4A2Q12974 167 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 MORF4L2Q15014 288 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 BRDTQ58F21 947 aaPredicted RBP14.91□□□□□ -0.02
COL9A2-207ENST00000482722 RNASEH2BQ5TBB1 312 aaKnown RBP14.91□□□□□ -0.02
COL9A2-207ENST00000482722 C6orf163Q5TEZ5 329 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 ANKRD22Q5VYY1 191 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 ADGRD1Q6QNK2 874 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 RASSF3Q86WH2 238 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 OR6Y1Q8NGX8 325 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 PPCSQ9HAB8 311 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 PCDHB2Q9Y5E7 798 aa14.91□□□□□ -0.02
COL9A2-207ENST00000482722 CAPN14A8MX76 684 aa14.9□□□□□ -0.02
COL9A2-207ENST00000482722 COQ9O75208 318 aa14.9□□□□□ -0.02
COL9A2-207ENST00000482722 KRT1P04264 644 aa14.9□□□□□ -0.02
COL9A2-207ENST00000482722 ITGA2BP08514 1039 aa14.9□□□□□ -0.02
COL9A2-207ENST00000482722 SNRPFP62306 86 aaKnown RBP14.9□□□□□ -0.02
COL9A2-207ENST00000482722 SP2Q02086 613 aa14.9□□□□□ -0.02
COL9A2-207ENST00000482722 HNRNPDQ14103 355 aaKnown RBP14.9□□□□□ -0.02
COL9A2-207ENST00000482722 SFT2D3Q587I9 215 aa14.9□□□□□ -0.02
COL9A2-207ENST00000482722 ZBTB41Q5SVQ8 909 aa14.9□□□□□ -0.02
COL9A2-207ENST00000482722 C3orf62Q6ZUJ4 267 aa14.9□□□□□ -0.02
COL9A2-207ENST00000482722 MON1BQ7L1V2 547 aa14.9□□□□□ -0.02
COL9A2-207ENST00000482722 MTBPQ96DY7 904 aa14.9□□□□□ -0.02
COL9A2-207ENST00000482722 DNAJC1Q96KC8 554 aaKnown RBP14.9□□□□□ -0.02
COL9A2-207ENST00000482722 FAM111AQ96PZ2 611 aa14.9□□□□□ -0.02
COL9A2-207ENST00000482722 AVENQ9NQS1 362 aaPredicted RBP14.9□□□□□ -0.02
COL9A2-207ENST00000482722 IVNS1ABPQ9Y6Y0 642 aa14.9□□□□□ -0.02
COL9A2-207ENST00000482722 KAT6AQ92794 2004 aa14.9□□□□□ -0.02
COL9A2-207ENST00000482722 PMM2O15305 246 aa14.9□□□□□ -0.02
COL9A2-207ENST00000482722 PSTPIP1O43586 416 aa14.9□□□□□ -0.02
COL9A2-207ENST00000482722 LPXNO60711 386 aa14.9□□□□□ -0.02
COL9A2-207ENST00000482722 BPIFB4P59827 614 aa14.9□□□□□ -0.02
COL9A2-207ENST00000482722 GCNT1Q02742 428 aa14.9□□□□□ -0.02
COL9A2-207ENST00000482722 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.9□□□□□ -0.02
COL9A2-207ENST00000482722 TDRD10Q5VZ19 366 aaKnown RBP14.9□□□□□ -0.02
COL9A2-207ENST00000482722 PDSS2Q86YH6 399 aa14.9□□□□□ -0.02
COL9A2-207ENST00000482722 CCDC60Q8IWA6 550 aaPredicted RBP14.9□□□□□ -0.02
COL9A2-207ENST00000482722 KATNAL2Q8IYT4 538 aa14.9□□□□□ -0.02
COL9A2-207ENST00000482722 ALLCQ8N6M5 410 aa14.9□□□□□ -0.02
COL9A2-207ENST00000482722 OTUD5Q96G74 571 aa14.9□□□□□ -0.02
COL9A2-207ENST00000482722 ELP3Q9H9T3 547 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms