RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 FAM200BP0CF97 657 aa17.55■□□□□ 0.4
VAMP4-204ENST00000482519 PDE6CP51160 858 aa17.55■□□□□ 0.4
VAMP4-204ENST00000482519 TRIM68Q6AZZ1 485 aa17.55■□□□□ 0.4
VAMP4-204ENST00000482519 ALYREFQ86V81 257 aaKnown RBP17.55■□□□□ 0.4
VAMP4-204ENST00000482519 CREBRFQ8IUR6 639 aa17.55■□□□□ 0.4
VAMP4-204ENST00000482519 TRIML1Q8N9V2 468 aa17.55■□□□□ 0.4
VAMP4-204ENST00000482519 WHAMMQ8TF30 809 aa17.55■□□□□ 0.4
VAMP4-204ENST00000482519 SMOQ99835 787 aa17.55■□□□□ 0.4
VAMP4-204ENST00000482519 SRRTQ9BXP5 876 aaKnown RBP17.55■□□□□ 0.4
VAMP4-204ENST00000482519 OSBPL6Q9BZF3 934 aa17.55■□□□□ 0.4
VAMP4-204ENST00000482519 EBF3Q9H4W6 596 aa17.55■□□□□ 0.4
VAMP4-204ENST00000482519 CISHQ9NSE2 258 aa17.55■□□□□ 0.4
VAMP4-204ENST00000482519 GCNT4Q9P109 453 aa17.55■□□□□ 0.4
VAMP4-204ENST00000482519 CHORDC1Q9UHD1 332 aaPredicted RBP17.55■□□□□ 0.4
VAMP4-204ENST00000482519 COL4A2P08572 1712 aa17.55■□□□□ 0.4
VAMP4-204ENST00000482519 CACNA1HO95180 2353 aa17.54■□□□□ 0.4
VAMP4-204ENST00000482519 KIF26AQ9ULI4 1882 aaPredicted RBP17.54■□□□□ 0.4
VAMP4-204ENST00000482519 F5P12259 2224 aa17.54■□□□□ 0.4
VAMP4-204ENST00000482519 SPECC1L-ADORA2AF8WAN1 911 aa17.54■□□□□ 0.4
VAMP4-204ENST00000482519 PPP3CCP48454 512 aa17.54■□□□□ 0.4
VAMP4-204ENST00000482519 FMO5P49326 533 aa17.54■□□□□ 0.4
VAMP4-204ENST00000482519 SLC5A3P53794 718 aa17.54■□□□□ 0.4
VAMP4-204ENST00000482519 ZNF268Q14587 947 aaPredicted RBP17.54■□□□□ 0.4
VAMP4-204ENST00000482519 ITPRIPL2Q3MIP1 535 aa17.54■□□□□ 0.4
VAMP4-204ENST00000482519 C1orf210Q8IVY1 113 aa17.54■□□□□ 0.4
VAMP4-204ENST00000482519 RIN3Q8TB24 985 aa17.54■□□□□ 0.4
VAMP4-204ENST00000482519 SH3RF2Q8TEC5 729 aa17.54■□□□□ 0.4
VAMP4-204ENST00000482519 HNRNPABQ99729 332 aaKnown RBP17.54■□□□□ 0.4
VAMP4-204ENST00000482519 CLSTN2Q9H4D0 955 aa17.54■□□□□ 0.4
VAMP4-204ENST00000482519 C8orf33Q9H7E9 229 aaPredicted RBP17.54■□□□□ 0.4
VAMP4-204ENST00000482519 TNFRSF10BO14763 440 aa17.53■□□□□ 0.4
VAMP4-204ENST00000482519 MTF1Q14872 753 aa17.53■□□□□ 0.4
VAMP4-204ENST00000482519 TTC39CQ8N584 583 aa17.53■□□□□ 0.4
VAMP4-204ENST00000482519 PDZD8Q8NEN9 1154 aa17.53■□□□□ 0.4
VAMP4-204ENST00000482519 ZMIZ2Q8NF64 920 aa17.53■□□□□ 0.4
VAMP4-204ENST00000482519 FAM83CQ9BQN1 747 aa17.53■□□□□ 0.4
VAMP4-204ENST00000482519 RNF38Q9H0F5 515 aa17.53■□□□□ 0.4
VAMP4-204ENST00000482519 LMAN1LQ9HAT1 526 aa17.53■□□□□ 0.4
VAMP4-204ENST00000482519 DUS2Q9NX74 493 aaKnown RBP17.53■□□□□ 0.4
VAMP4-204ENST00000482519 SMPD4Q9NXE4 827 aa17.53■□□□□ 0.4
VAMP4-204ENST00000482519 COQ4Q9Y3A0 265 aa17.53■□□□□ 0.4
VAMP4-204ENST00000482519 GNA14O95837 355 aa17.52■□□□□ 0.4
VAMP4-204ENST00000482519 ARSAP15289 507 aa17.52■□□□□ 0.4
VAMP4-204ENST00000482519 CTHP32929 405 aa17.52■□□□□ 0.4
VAMP4-204ENST00000482519 IFNAR2P48551 515 aa17.52■□□□□ 0.4
VAMP4-204ENST00000482519 MRE11P49959 708 aa17.52■□□□□ 0.4
VAMP4-204ENST00000482519 CETN1Q12798 172 aa17.52■□□□□ 0.4
VAMP4-204ENST00000482519 CUL2Q13617 745 aa17.52■□□□□ 0.4
VAMP4-204ENST00000482519 RUNX3Q13761 415 aa17.52■□□□□ 0.4
VAMP4-204ENST00000482519 PON2Q15165 354 aa17.52■□□□□ 0.4
VAMP4-204ENST00000482519 ZNF77Q15935 545 aa17.52■□□□□ 0.4
VAMP4-204ENST00000482519 PPP1R26Q5T8A7 1209 aaPredicted RBP17.52■□□□□ 0.4
VAMP4-204ENST00000482519 TXNDC11Q6PKC3 985 aa17.52■□□□□ 0.4
VAMP4-204ENST00000482519 CLEC20AQ6ZU45 233 aa17.52■□□□□ 0.4
VAMP4-204ENST00000482519 RALGPS2Q86X27 583 aaPredicted RBP17.52■□□□□ 0.4
VAMP4-204ENST00000482519 CLDN23Q96B33 292 aa17.52■□□□□ 0.4
VAMP4-204ENST00000482519 TMEM176AQ96HP8 235 aa17.52■□□□□ 0.4
VAMP4-204ENST00000482519 FAXDC2Q96IV6 333 aa17.52■□□□□ 0.4
VAMP4-204ENST00000482519 CSNK1G1Q9HCP0 422 aa17.52■□□□□ 0.4
VAMP4-204ENST00000482519 HPS4Q9NQG7 708 aa17.52■□□□□ 0.4
VAMP4-204ENST00000482519 GMIPQ9P107 970 aa17.52■□□□□ 0.4
VAMP4-204ENST00000482519 RWDD2AQ9UIY3 292 aa17.52■□□□□ 0.4
VAMP4-204ENST00000482519 ARHGAP26Q9UNA1 814 aa17.52■□□□□ 0.4
VAMP4-204ENST00000482519 WNT6Q9Y6F9 365 aa17.52■□□□□ 0.4
VAMP4-204ENST00000482519 LAMTOR5O43504 91 aa17.51■□□□□ 0.39
VAMP4-204ENST00000482519 FGFR1OPO95684 399 aaKnown RBP17.51■□□□□ 0.39
VAMP4-204ENST00000482519 MBL2P11226 248 aaPredicted RBP17.51■□□□□ 0.39
VAMP4-204ENST00000482519 RAD23BP54727 409 aa17.51■□□□□ 0.39
VAMP4-204ENST00000482519 MLLT6P55198 1093 aaPredicted RBP17.51■□□□□ 0.39
VAMP4-204ENST00000482519 FZD5Q13467 585 aa17.51■□□□□ 0.39
VAMP4-204ENST00000482519 PDGFRLQ15198 375 aa17.51■□□□□ 0.39
VAMP4-204ENST00000482519 FOXR2Q6PJQ5 311 aa17.51■□□□□ 0.39
VAMP4-204ENST00000482519 SLC4A11Q8NBS3 891 aa17.51■□□□□ 0.39
VAMP4-204ENST00000482519 OSCP1Q8WVF1 389 aa17.51■□□□□ 0.39
VAMP4-204ENST00000482519 MSANTD3Q96H12 275 aa17.51■□□□□ 0.39
VAMP4-204ENST00000482519 NACA2Q9H009 215 aa17.51■□□□□ 0.39
VAMP4-204ENST00000482519 NUP62CLQ9H1M0 184 aa17.51■□□□□ 0.39
VAMP4-204ENST00000482519 FBXO44Q9H4M3 255 aa17.51■□□□□ 0.39
VAMP4-204ENST00000482519 COMMD8Q9NX08 183 aa17.51■□□□□ 0.39
VAMP4-204ENST00000482519 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.51■□□□□ 0.39
VAMP4-204ENST00000482519 CPQQ9Y646 472 aa17.51■□□□□ 0.39
VAMP4-204ENST00000482519 HELZP42694 1942 aaKnown RBP17.51■□□□□ 0.39
VAMP4-204ENST00000482519 CACNA1IQ9P0X4 2223 aa17.5■□□□□ 0.39
VAMP4-204ENST00000482519 OTOL1A6NHN0 477 aaPredicted RBP17.5■□□□□ 0.39
VAMP4-204ENST00000482519 LEFTY2O00292 366 aa17.5■□□□□ 0.39
VAMP4-204ENST00000482519 SCAMP3O14828 347 aaKnown RBP17.5■□□□□ 0.39
VAMP4-204ENST00000482519 OAS1P00973 400 aaKnown RBP17.5■□□□□ 0.39
VAMP4-204ENST00000482519 CCDC192P0DO97 292 aa17.5■□□□□ 0.39
VAMP4-204ENST00000482519 PFKLP17858 780 aa17.5■□□□□ 0.39
VAMP4-204ENST00000482519 ACO1P21399 889 aaKnown RBP17.5■□□□□ 0.39
VAMP4-204ENST00000482519 MAGEA9P43362 315 aa17.5■□□□□ 0.39
VAMP4-204ENST00000482519 RPS9P46781 194 aaKnown RBP17.5■□□□□ 0.39
VAMP4-204ENST00000482519 YWHAEP62258 255 aaKnown RBP17.5■□□□□ 0.39
VAMP4-204ENST00000482519 KCNH2Q12809 1159 aa17.5■□□□□ 0.39
VAMP4-204ENST00000482519 USP4Q13107 963 aa17.5■□□□□ 0.39
VAMP4-204ENST00000482519 MTAPQ13126 283 aa17.5■□□□□ 0.39
VAMP4-204ENST00000482519 HECTD3Q5T447 861 aa17.5■□□□□ 0.39
VAMP4-204ENST00000482519 C1orf228Q6PIY5 440 aa17.5■□□□□ 0.39
VAMP4-204ENST00000482519 GPRIN1Q7Z2K8 1008 aa17.5■□□□□ 0.39
VAMP4-204ENST00000482519 ZNF687Q8N1G0 1237 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms