RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 LRRC63Q05C16 580 aa21.1■□□□□ 0.97
MSH5-215ENST00000482280 PPP3CAQ08209 521 aa21.1■□□□□ 0.97
MSH5-215ENST00000482280 USP4Q13107 963 aa21.1■□□□□ 0.97
MSH5-215ENST00000482280 ZNF77Q15935 545 aa21.1■□□□□ 0.97
MSH5-215ENST00000482280 ZCWPW2Q504Y3 356 aa21.1■□□□□ 0.97
MSH5-215ENST00000482280 TXNDC11Q6PKC3 985 aa21.1■□□□□ 0.97
MSH5-215ENST00000482280 ZNF687Q8N1G0 1237 aa21.1■□□□□ 0.97
MSH5-215ENST00000482280 CRYBG2Q8N1P7 616 aa21.1■□□□□ 0.97
MSH5-215ENST00000482280 ENGASEQ8NFI3 743 aa21.1■□□□□ 0.97
MSH5-215ENST00000482280 SLC2A14Q8TDB8 520 aa21.1■□□□□ 0.97
MSH5-215ENST00000482280 EEF2KMTQ96G04 330 aa21.1■□□□□ 0.97
MSH5-215ENST00000482280 KCNK16Q96T55 309 aa21.1■□□□□ 0.97
MSH5-215ENST00000482280 FBXO44Q9H4M3 255 aa21.1■□□□□ 0.97
MSH5-215ENST00000482280 RBM12Q9NTZ6 932 aaKnown RBP21.1■□□□□ 0.97
MSH5-215ENST00000482280 FAM49BQ9NUQ9 324 aa21.1■□□□□ 0.97
MSH5-215ENST00000482280 COMMD8Q9NX08 183 aa21.1■□□□□ 0.97
MSH5-215ENST00000482280 GCNT4Q9P109 453 aa21.1■□□□□ 0.97
MSH5-215ENST00000482280 RAB23Q9ULC3 237 aa21.1■□□□□ 0.97
MSH5-215ENST00000482280 WNT6Q9Y6F9 365 aa21.1■□□□□ 0.97
MSH5-215ENST00000482280 SLC9A3R1O14745 358 aaPredicted RBP21.09■□□□□ 0.97
MSH5-215ENST00000482280 SLC16A3O15427 465 aaKnown RBP21.09■□□□□ 0.97
MSH5-215ENST00000482280 ATG13O75143 517 aa21.09■□□□□ 0.97
MSH5-215ENST00000482280 MBL2P11226 248 aaPredicted RBP21.09■□□□□ 0.97
MSH5-215ENST00000482280 CCDC130P13994 396 aa21.09■□□□□ 0.97
MSH5-215ENST00000482280 SLC5A3P53794 718 aa21.09■□□□□ 0.97
MSH5-215ENST00000482280 CACNA2D1P54289 1103 aa21.09■□□□□ 0.97
MSH5-215ENST00000482280 ORC1Q13415 861 aa21.09■□□□□ 0.97
MSH5-215ENST00000482280 COBLL1Q53SF7 1204 aa21.09■□□□□ 0.97
MSH5-215ENST00000482280 C1orf220Q5T0J3 134 aa21.09■□□□□ 0.97
MSH5-215ENST00000482280 FBXL13Q8NEE6 735 aa21.09■□□□□ 0.97
MSH5-215ENST00000482280 ECT2Q9H8V3 914 aa21.09■□□□□ 0.97
MSH5-215ENST00000482280 HPS4Q9NQG7 708 aa21.09■□□□□ 0.97
MSH5-215ENST00000482280 CIZ1Q9ULV3 898 aaPredicted RBP21.09■□□□□ 0.97
MSH5-215ENST00000482280 COL4A2P08572 1712 aa21.08■□□□□ 0.97
MSH5-215ENST00000482280 TCF3P15923 654 aa21.08■□□□□ 0.97
MSH5-215ENST00000482280 ADORA2BP29275 332 aa21.08■□□□□ 0.97
MSH5-215ENST00000482280 FUKQ8N0W3 1084 aa21.08■□□□□ 0.97
MSH5-215ENST00000482280 CCDC26Q8TAB7 109 aa21.08■□□□□ 0.97
MSH5-215ENST00000482280 P2RY13Q9BPV8 354 aa21.08■□□□□ 0.97
MSH5-215ENST00000482280 RAB20Q9NX57 234 aa21.08■□□□□ 0.97
MSH5-215ENST00000482280 SMPD4Q9NXE4 827 aa21.08■□□□□ 0.97
MSH5-215ENST00000482280 NCDNQ9UBB6 729 aa21.08■□□□□ 0.97
MSH5-215ENST00000482280 CPQQ9Y646 472 aa21.08■□□□□ 0.97
MSH5-215ENST00000482280 LEFTY2O00292 366 aa21.07■□□□□ 0.96
MSH5-215ENST00000482280 DRD1P21728 446 aa21.07■□□□□ 0.96
MSH5-215ENST00000482280 MAP3K7CLP57077 242 aa21.07■□□□□ 0.96
MSH5-215ENST00000482280 SLC7A9P82251 487 aa21.07■□□□□ 0.96
MSH5-215ENST00000482280 INCA1Q0VD86 236 aa21.07■□□□□ 0.96
MSH5-215ENST00000482280 HECTD3Q5T447 861 aa21.07■□□□□ 0.96
MSH5-215ENST00000482280 RUBCNQ92622 972 aa21.07■□□□□ 0.96
MSH5-215ENST00000482280 ERCC4Q92889 916 aaPredicted RBP21.07■□□□□ 0.96
MSH5-215ENST00000482280 CYFIP2Q96F07 1278 aa21.07■□□□□ 0.96
MSH5-215ENST00000482280 DHTKD1Q96HY7 919 aaPredicted RBP21.07■□□□□ 0.96
MSH5-215ENST00000482280 FAXDC2Q96IV6 333 aa21.07■□□□□ 0.96
MSH5-215ENST00000482280 HMGXB4Q9UGU5 601 aa21.07■□□□□ 0.96
MSH5-215ENST00000482280 ARMCX3Q9UH62 379 aaPredicted RBP21.07■□□□□ 0.96
MSH5-215ENST00000482280 TRDMT1O14717 391 aaKnown RBP21.06■□□□□ 0.96
MSH5-215ENST00000482280 SLC8A3P57103 927 aa21.06■□□□□ 0.96
MSH5-215ENST00000482280 SATB1Q01826 763 aa21.06■□□□□ 0.96
MSH5-215ENST00000482280 CCINQ13939 588 aa21.06■□□□□ 0.96
MSH5-215ENST00000482280 FBXO43Q4G163 708 aa21.06■□□□□ 0.96
MSH5-215ENST00000482280 TMEM196Q5HYL7 178 aa21.06■□□□□ 0.96
MSH5-215ENST00000482280 ANKRD40Q6AI12 368 aa21.06■□□□□ 0.96
MSH5-215ENST00000482280 ISM2Q6H9L7 571 aa21.06■□□□□ 0.96
MSH5-215ENST00000482280 Q6ZS52 159 aa21.06■□□□□ 0.96
MSH5-215ENST00000482280 ELOA2Q8IYF1 753 aaPredicted RBP21.06■□□□□ 0.96
MSH5-215ENST00000482280 KIAA1958Q8N8K9 716 aa21.06■□□□□ 0.96
MSH5-215ENST00000482280 C12orf29Q8N999 325 aa21.06■□□□□ 0.96
MSH5-215ENST00000482280 ZBTB44Q8NCP5 570 aa21.06■□□□□ 0.96
MSH5-215ENST00000482280 APOBEC3GQ9HC16 384 aaKnown RBP21.06■□□□□ 0.96
MSH5-215ENST00000482280 METTL14Q9HCE5 456 aaKnown RBP21.06■□□□□ 0.96
MSH5-215ENST00000482280 TLR8Q9NR97 1041 aaKnown RBP21.06■□□□□ 0.96
MSH5-215ENST00000482280 TMEM30AQ9NV96 361 aa21.06■□□□□ 0.96
MSH5-215ENST00000482280 CHORDC1Q9UHD1 332 aaPredicted RBP21.06■□□□□ 0.96
MSH5-215ENST00000482280 SH3BP1Q9Y3L3 701 aa21.06■□□□□ 0.96
MSH5-215ENST00000482280 BICDL2A1A5D9 508 aa21.05■□□□□ 0.96
MSH5-215ENST00000482280 OAS1P00973 400 aaKnown RBP21.05■□□□□ 0.96
MSH5-215ENST00000482280 GJA4P35212 333 aa21.05■□□□□ 0.96
MSH5-215ENST00000482280 YWHAEP62258 255 aaKnown RBP21.05■□□□□ 0.96
MSH5-215ENST00000482280 GOLGA8FQ08AF8 430 aa21.05■□□□□ 0.96
MSH5-215ENST00000482280 GOLGA8DPQ0D2H9 430 aa21.05■□□□□ 0.96
MSH5-215ENST00000482280 EML3Q32P44 896 aa21.05■□□□□ 0.96
MSH5-215ENST00000482280 CCDC40Q4G0X9 1142 aa21.05■□□□□ 0.96
MSH5-215ENST00000482280 PAQR9Q6ZVX9 377 aa21.05■□□□□ 0.96
MSH5-215ENST00000482280 SCAMP5Q8TAC9 235 aa21.05■□□□□ 0.96
MSH5-215ENST00000482280 SPATA20Q8TB22 786 aa21.05■□□□□ 0.96
MSH5-215ENST00000482280 RIN3Q8TB24 985 aa21.05■□□□□ 0.96
MSH5-215ENST00000482280 CD101Q93033 1021 aa21.05■□□□□ 0.96
MSH5-215ENST00000482280 JAKMIP2Q96AA8 810 aa21.05■□□□□ 0.96
MSH5-215ENST00000482280 HEXIM2Q96MH2 286 aaKnown RBP21.05■□□□□ 0.96
MSH5-215ENST00000482280 HNRNPABQ99729 332 aaKnown RBP21.05■□□□□ 0.96
MSH5-215ENST00000482280 CFAP97Q9P2B7 532 aa21.05■□□□□ 0.96
MSH5-215ENST00000482280 TBC1D14Q9P2M4 693 aa21.05■□□□□ 0.96
MSH5-215ENST00000482280 SLC8A2Q9UPR5 921 aa21.05■□□□□ 0.96
MSH5-215ENST00000482280 PATJQ8NI35 1801 aa21.05■□□□□ 0.96
MSH5-215ENST00000482280 ZNF638Q14966 1978 aaKnown RBP21.05■□□□□ 0.96
MSH5-215ENST00000482280 OTOL1A6NHN0 477 aaPredicted RBP21.04■□□□□ 0.96
MSH5-215ENST00000482280 CILPO75339 1184 aa21.04■□□□□ 0.96
MSH5-215ENST00000482280 TUBP50607 506 aa21.04■□□□□ 0.96
MSH5-215ENST00000482280 GALK1P51570 392 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms