RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 FUKQ8N0W3 1084 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 SPEM1Q8N4L4 309 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 C12orf29Q8N999 325 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 ZBTB44Q8NCP5 570 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 SCAMP5Q8TAC9 235 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 SLC2A14Q8TDB8 520 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 OSCP1Q8WVF1 389 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 SMARCD1Q96GM5 515 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 CCDC34Q96HJ3 373 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 TNIP3Q96KP6 325 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 SLITRK1Q96PX8 696 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 TWNKQ96RR1 684 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 IER2Q9BTL4 223 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 IMPG2Q9BZV3 1241 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 RNF38Q9H0F5 515 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 SEMA4AQ9H3S1 761 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 ECT2Q9H8V3 914 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 FBRSL1Q9HCM7 1045 aaKnown RBP11.12□□□□□ -0.63
CPSF4-212ENST00000482251 DMAP1Q9NPF5 467 aaPredicted RBP11.12□□□□□ -0.63
CPSF4-212ENST00000482251 GMIPQ9P107 970 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 NCDNQ9UBB6 729 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 ARHGAP26Q9UNA1 814 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 CPQQ9Y646 472 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 GVINP1Q7Z2Y8 2422 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 GPR179Q6PRD1 2367 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 MYH10P35580 1976 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 TRIM49BA6NDI0 452 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 LILRB5O75023 590 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 RNF40O75150 1001 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 BEST1O76090 585 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 OAS1P00973 400 aaKnown RBP11.11□□□□□ -0.63
CPSF4-212ENST00000482251 MBL2P11226 248 aaPredicted RBP11.11□□□□□ -0.63
CPSF4-212ENST00000482251 RPL13P26373 211 aaKnown RBP11.11□□□□□ -0.63
CPSF4-212ENST00000482251 YWHAQP27348 245 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 GJA4P35212 333 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 PSMC2P35998 433 aaKnown RBP11.11□□□□□ -0.63
CPSF4-212ENST00000482251 PRCPP42785 496 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 PXNP49023 591 aaPredicted RBP11.11□□□□□ -0.63
CPSF4-212ENST00000482251 MAP3K7CLP57077 242 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 NUCB2P80303 420 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 GRSF1Q12849 480 aaKnown RBP eCLIP11.11□□□□□ -0.63
CPSF4-212ENST00000482251 NFIL3Q16649 462 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 DCAF17Q5H9S7 520 aaPredicted RBP11.11□□□□□ -0.63
CPSF4-212ENST00000482251 TMEM196Q5HYL7 178 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 ISM2Q6H9L7 571 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 GPRIN1Q7Z2K8 1008 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 NUP93Q8N1F7 819 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 ZMIZ2Q8NF64 920 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 TMEM174Q8WUU8 243 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 RUBCNQ92622 972 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 NELL1Q92832 810 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 ATP2A3Q93084 1043 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 SMOQ99835 787 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 NIF3L1Q9GZT8 377 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 LINC00597Q9H2U6 94 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 EHD2Q9NZN4 543 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 CFAP97Q9P2B7 532 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 FRYLO94915 3013 aa11.11□□□□□ -0.63
CPSF4-212ENST00000482251 ATG2BQ96BY7 2078 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 SOBPA7XYQ1 873 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 K7ESF4 209 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 IKBKBO14920 756 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 MAPK13O15264 365 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 COCHO43405 550 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 FAM163BP0C2L3 166 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 IRF1P10914 325 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 EPB41P11171 864 aaKnown RBP11.1□□□□□ -0.63
CPSF4-212ENST00000482251 MXI1P50539 228 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 PDE6CP51160 858 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 PMS1P54277 932 aaKnown RBP11.1□□□□□ -0.63
CPSF4-212ENST00000482251 ZNF394Q53GI3 561 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 TCERG1LQ5VWI1 586 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 FILIP1Q7Z7B0 1213 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 ENGASEQ8NFI3 743 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 TAF4BQ92750 862 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 EZH1Q92800 747 aaPredicted RBP11.1□□□□□ -0.63
CPSF4-212ENST00000482251 SEMA4DQ92854 862 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 SMARCE1Q969G3 411 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 CEP295NLQ96MC4 621 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 ARID3AQ99856 593 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 P2RY13Q9BPV8 354 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 EPC1Q9H2F5 836 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 CCSER2Q9H7U1 834 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 TMEM8AQ9HCN3 771 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 RMND1Q9NWS8 449 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 CHORDC1Q9UHD1 332 aaPredicted RBP11.1□□□□□ -0.63
CPSF4-212ENST00000482251 OTOGLQ3ZCN5 2332 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 EP300Q09472 2414 aaPredicted RBP11.1□□□□□ -0.63
CPSF4-212ENST00000482251 DCHS1Q96JQ0 3298 aa11.1□□□□□ -0.63
CPSF4-212ENST00000482251 KIAA1549LQ6ZVL6 1849 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 ANTXRLA6NF34 631 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 TRDMT1O14717 391 aaKnown RBP11.09□□□□□ -0.63
CPSF4-212ENST00000482251 TNFRSF10BO14763 440 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 CETN3O15182 167 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 CYP26A1O43174 497 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 RTN3O95197 1032 aaPredicted RBP11.09□□□□□ -0.63
CPSF4-212ENST00000482251 NFATC1O95644 943 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 OLFM2O95897 454 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 CYP17A1P05093 508 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 FAM200BP0CF97 657 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms