RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 CNOT11Q9UKZ1 510 aaKnown RBP6.12□□□□□ -1.43
UPF3A-207ENST00000481131 NOX1Q9Y5S8 564 aa6.12□□□□□ -1.43
UPF3A-207ENST00000481131 SNAPC4Q5SXM2 1469 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 AGPSO00116 658 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 ASNA1O43681 348 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 SPDEFO95238 335 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 ERBB2P04626 1255 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 PDHA1P08559 390 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 ITGA5P08648 1049 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 HGFP14210 728 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 DDX6P26196 483 aaKnown RBP eCLIP6.11□□□□□ -1.43
UPF3A-207ENST00000481131 ADORA2AP29274 412 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 HNRNPMP52272 730 aaKnown RBP eCLIP6.11□□□□□ -1.43
UPF3A-207ENST00000481131 SATB1Q01826 763 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 FOXO1Q12778 655 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 FHL3Q13643 280 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 FAXCQ5TGI0 409 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 MRNIPQ6NTE8 343 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 JMJD6Q6NYC1 403 aaPredicted RBP6.11□□□□□ -1.43
UPF3A-207ENST00000481131 PRRT2Q7Z6L0 340 aaPredicted RBP6.11□□□□□ -1.43
UPF3A-207ENST00000481131 SUGP1Q8IWZ8 645 aaKnown RBP6.11□□□□□ -1.43
UPF3A-207ENST00000481131 SLC15A3Q8IY34 581 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 CPXCR1Q8N123 301 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 ZNF276Q8N554 614 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 OR1N1Q8NGS0 311 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 STT3BQ8TCJ2 826 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 SMCR8Q8TEV9 937 aaPredicted RBP6.11□□□□□ -1.43
UPF3A-207ENST00000481131 TBC1D20Q96BZ9 403 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 FAM227BQ96M60 508 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 SCLT1Q96NL6 688 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 SORBS1Q9BX66 1292 aaKnown RBP6.11□□□□□ -1.43
UPF3A-207ENST00000481131 ZBTB26Q9HCK0 441 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 SMPD4Q9NXE4 827 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 SAGE1Q9NXZ1 904 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 TESMINQ9Y4I5 508 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 DTNAQ9Y4J8 743 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.11□□□□□ -1.43
UPF3A-207ENST00000481131 SNX14Q9Y5W7 946 aa6.11□□□□□ -1.43
UPF3A-207ENST00000481131 GAPVD1Q14C86 1478 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 TRGV11A0A075B6L2 103 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 UNC119BA6NIH7 251 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 TMEM200CA6NKL6 621 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 PCDH17O14917 1159 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 RGS10O43665 173 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 TRIAP1O43715 76 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 LPXNO60711 386 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 CDKL5O76039 1030 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 HLA-DOAP06340 250 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 IDEP14735 1019 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 PPP3CBP16298 524 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 PAX3P23760 479 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 BMPR1AP36894 532 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 E2F2Q14209 437 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 POSTNQ15063 836 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 SPDYE7PQ495Y7 208 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 USP39Q53GS9 565 aaKnown RBP6.1□□□□□ -1.43
UPF3A-207ENST00000481131 SPDYAQ5MJ70 313 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 ICE2Q659A1 982 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 ARL6IP4Q66PJ3 421 aaKnown RBP6.1□□□□□ -1.43
UPF3A-207ENST00000481131 KRT73Q86Y46 540 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 C1orf210Q8IVY1 113 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 SPARTQ8N0X7 666 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 TRAPPC12Q8WVT3 735 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 FAM136AQ96C01 138 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 ZBTB45Q96K62 511 aaPredicted RBP6.1□□□□□ -1.43
UPF3A-207ENST00000481131 SLC25A32Q9H2D1 315 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 INTS13Q9NVM9 706 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 ADAMTS12P58397 1594 aa6.1□□□□□ -1.43
UPF3A-207ENST00000481131 OR2W5A6NFC9 320 aa6.09□□□□□ -1.43
UPF3A-207ENST00000481131 PPM1DO15297 605 aa6.09□□□□□ -1.43
UPF3A-207ENST00000481131 NPPBP16860 134 aa6.09□□□□□ -1.43
UPF3A-207ENST00000481131 NTSR1P30989 418 aa6.09□□□□□ -1.43
UPF3A-207ENST00000481131 UQCRC1P31930 480 aa6.09□□□□□ -1.43
UPF3A-207ENST00000481131 PPM1FP49593 454 aaPredicted RBP6.09□□□□□ -1.43
UPF3A-207ENST00000481131 PDE6CP51160 858 aa6.09□□□□□ -1.43
UPF3A-207ENST00000481131 PNLIPRP1P54315 467 aa6.09□□□□□ -1.43
UPF3A-207ENST00000481131 EFEMP1Q12805 493 aa6.09□□□□□ -1.43
UPF3A-207ENST00000481131 TP53BP2Q13625 1128 aa6.09□□□□□ -1.43
UPF3A-207ENST00000481131 LY6KQ17RY6 165 aa6.09□□□□□ -1.43
UPF3A-207ENST00000481131 HSP90AB4PQ58FF6 505 aa6.09□□□□□ -1.43
UPF3A-207ENST00000481131 DEPDC1Q5TB30 811 aa6.09□□□□□ -1.43
UPF3A-207ENST00000481131 SFRP4Q6FHJ7 346 aaPredicted RBP6.09□□□□□ -1.43
UPF3A-207ENST00000481131 ABLIM2Q6H8Q1 611 aa6.09□□□□□ -1.43
UPF3A-207ENST00000481131 SLC30A5Q8TAD4 765 aa6.09□□□□□ -1.43
UPF3A-207ENST00000481131 SLC25A43Q8WUT9 341 aaPredicted RBP6.09□□□□□ -1.43
UPF3A-207ENST00000481131 ATG4AQ8WYN0 398 aa6.09□□□□□ -1.43
UPF3A-207ENST00000481131 LPIN2Q92539 896 aa6.09□□□□□ -1.43
UPF3A-207ENST00000481131 DVL3Q92997 716 aaPredicted RBP6.09□□□□□ -1.43
UPF3A-207ENST00000481131 EID2BQ96D98 161 aa6.09□□□□□ -1.43
UPF3A-207ENST00000481131 MYEOVQ96EZ4 313 aa6.09□□□□□ -1.43
UPF3A-207ENST00000481131 PRPF18Q99633 342 aaKnown RBP6.09□□□□□ -1.43
UPF3A-207ENST00000481131 KATNAL1Q9BW62 490 aa6.09□□□□□ -1.43
UPF3A-207ENST00000481131 ACTRT3Q9BYD9 372 aa6.09□□□□□ -1.43
UPF3A-207ENST00000481131 GRIN2BQ13224 1484 aa6.09□□□□□ -1.44
UPF3A-207ENST00000481131 IPO5O00410 1097 aaKnown RBP6.08□□□□□ -1.44
UPF3A-207ENST00000481131 DHHO43323 396 aa6.08□□□□□ -1.44
UPF3A-207ENST00000481131 COQ9O75208 318 aa6.08□□□□□ -1.44
UPF3A-207ENST00000481131 LMNAP02545 664 aaKnown RBP6.08□□□□□ -1.44
UPF3A-207ENST00000481131 C1SP09871 688 aa6.08□□□□□ -1.44
UPF3A-207ENST00000481131 ZNF20P17024 532 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms