RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 KIAA1549LQ6ZVL6 1849 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 GOLGA6L4A6NEF3 574 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 A8MXQ7 604 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 K7EQS6 105 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 TAF4O00268 1085 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 TRIM66O15016 1216 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 ZBTB24O43167 697 aaPredicted RBP7.55□□□□□ -1.2
COL17A1-205ENST00000480127 HYAL3O43820 417 aaPredicted RBP7.55□□□□□ -1.2
COL17A1-205ENST00000480127 PPP6R2O75170 966 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 KIF20AO95235 890 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 CAPNS1P04632 268 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 ZSCAN22P10073 491 aaPredicted RBP7.55□□□□□ -1.2
COL17A1-205ENST00000480127 HNRNPLP14866 589 aaKnown RBP eCLIP7.55□□□□□ -1.2
COL17A1-205ENST00000480127 HDCP19113 662 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 BDNFP23560 247 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 NASPP49321 788 aaPredicted RBP7.55□□□□□ -1.2
COL17A1-205ENST00000480127 FAM160A1Q05DH4 1040 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 USP4Q13107 963 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 GAB4Q2WGN9 574 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 ZNF699Q32M78 642 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 EML3Q32P44 896 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 TDRD10Q5VZ19 366 aaKnown RBP7.55□□□□□ -1.2
COL17A1-205ENST00000480127 ANO7Q6IWH7 933 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 CRELD2Q6UXH1 353 aaPredicted RBP7.55□□□□□ -1.2
COL17A1-205ENST00000480127 SCARA5Q6ZMJ2 495 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 DPH6Q7L8W6 267 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 CBWD2Q8IUF1 395 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 MDGA1Q8NFP4 955 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 TSTD1Q8NFU3 115 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 OLIG1Q8TAK6 271 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 USP33Q8TEY7 942 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 PIGKQ92643 395 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 MYLPFQ96A32 169 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 SYAP1Q96A49 352 aaPredicted RBP7.55□□□□□ -1.2
COL17A1-205ENST00000480127 FUBP3Q96I24 572 aaKnown RBP eCLIP7.55□□□□□ -1.2
COL17A1-205ENST00000480127 FAM84AQ96KN4 292 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 CNOT6LQ96LI5 555 aaKnown RBP7.55□□□□□ -1.2
COL17A1-205ENST00000480127 FIZ1Q96SL8 496 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 CYP2S1Q96SQ9 504 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 TRIM9Q9C026 710 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 AGPAT3Q9NRZ7 376 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 TMEM74BQ9NUR3 256 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 EVLQ9UI08 416 aaPredicted RBP7.55□□□□□ -1.2
COL17A1-205ENST00000480127 KLK13Q9UKR3 277 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 CDH9Q9ULB4 789 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 FRMD4BQ9Y2L6 1034 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 MSRB2Q9Y3D2 182 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 ATP6V1DQ9Y5K8 247 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 WNT6Q9Y6F9 365 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 PKD1L2Q7Z442 2459 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 AKAP13Q12802 2813 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 ATG2BQ96BY7 2078 aa7.55□□□□□ -1.2
COL17A1-205ENST00000480127 MYO16Q9Y6X6 1858 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 SPAARA0A1B0GVQ0 90 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 FAM221BA6H8Z2 402 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 PPP1R37O75864 691 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 NOL4O94818 638 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 NFATC1O95644 943 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 F13A1P00488 732 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 CHRM1P11229 460 aaPredicted RBP7.54□□□□□ -1.2
COL17A1-205ENST00000480127 TCF3P15923 654 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 OPRD1P41143 372 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 PIK3CAP42336 1068 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 DHPSP49366 369 aaPredicted RBP7.54□□□□□ -1.2
COL17A1-205ENST00000480127 SEC13P55735 322 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 KRT85P78386 507 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 CRY1Q16526 586 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 C2orf27AQ580R0 203 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 TRIM61Q5EBN2 209 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 ZNF667Q5HYK9 610 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 BTBD8Q5XKL5 378 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 CEP135Q66GS9 1140 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 ATL3Q6DD88 541 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 VSTM1Q6UX27 236 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 TMEM92Q6UXU6 159 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 DENND5BQ6ZUT9 1274 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 UNC13DQ70J99 1090 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 TRAPPC11Q7Z392 1133 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 PIP4P1Q86T03 277 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 CCDC33Q8N5R6 958 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 FRMD1Q8N878 549 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 ARL14EPQ8N8R7 260 aaPredicted RBP7.54□□□□□ -1.2
COL17A1-205ENST00000480127 ZSWIM2Q8NEG5 633 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 OR5B17Q8NGF7 314 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 SPATA18Q8TC71 538 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 LEO1Q8WVC0 666 aaPredicted RBP7.54□□□□□ -1.2
COL17A1-205ENST00000480127 RLN3Q8WXF3 142 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 TRMT2BQ96GJ1 504 aaKnown RBP7.54□□□□□ -1.2
COL17A1-205ENST00000480127 TNIP3Q96KP6 325 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 SPATA32Q96LK8 384 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 MYRFLQ96LU7 910 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 CGRRF1Q99675 332 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 FGFBP2Q9BYJ0 223 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 LINC00597Q9H2U6 94 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 MMRN2Q9H8L6 949 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 SMPD4Q9NXE4 827 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 GDAP2Q9NXN4 497 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 GCNT4Q9P109 453 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 BCCIPQ9P287 314 aaKnown RBP eCLIP7.54□□□□□ -1.2
COL17A1-205ENST00000480127 CGNQ9P2M7 1197 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms