RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 CDKN2BP42772 138 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 MNX1P50219 401 aaPredicted RBP11.55□□□□□ -0.56
VTI1A-204ENST00000480057 TSPY1Q01534 308 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 LMNB2Q03252 620 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 CASP8Q14790 479 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 CCDC14Q49A88 953 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 BOLA3Q53S33 107 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 KIAA0319Q5VV43 1072 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 DUPD1Q68J44 220 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 FBXO46Q6PJ61 603 aaPredicted RBP11.55□□□□□ -0.56
VTI1A-204ENST00000480057 CLEC20AQ6ZU45 233 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 STRADAQ7RTN6 431 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 CTU1Q7Z7A3 348 aaKnown RBP11.55□□□□□ -0.56
VTI1A-204ENST00000480057 PIGZQ86VD9 579 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 JAMLQ86YT9 394 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 NPAS4Q8IUM7 802 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 ABI1Q8IZP0 508 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 MREGQ8N565 214 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 EMC1Q8N766 993 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 TTC13Q8NBP0 860 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 CENPIQ92674 756 aaPredicted RBP11.55□□□□□ -0.56
VTI1A-204ENST00000480057 ARMC5Q96C12 935 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 ZNF333Q96JL9 665 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 PKNOX2Q96KN3 472 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 FAM193BQ96PV7 902 aaPredicted RBP11.55□□□□□ -0.56
VTI1A-204ENST00000480057 PKMYT1Q99640 499 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 RTP3Q9BQQ7 232 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 PAAF1Q9BRP4 392 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 TMEM175Q9BSA9 504 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 MED10Q9BTT4 135 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 C11orf84Q9BUA3 381 aaPredicted RBP11.55□□□□□ -0.56
VTI1A-204ENST00000480057 DDX23Q9BUQ8 820 aaKnown RBP11.55□□□□□ -0.56
VTI1A-204ENST00000480057 DCLK3Q9C098 648 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 HIPK3Q9H422 1215 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 LRRC4Q9HBW1 653 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 TBC1D13Q9NVG8 400 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 USP18Q9UMW8 372 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 TCRBV7S2A1N4TA0A589 114 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 C3orf70A6NLC5 250 aaPredicted RBP11.54□□□□□ -0.56
VTI1A-204ENST00000480057 MDM4O15151 490 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 PQBP1O60828 265 aaKnown RBP11.54□□□□□ -0.56
VTI1A-204ENST00000480057 DDHD2O94830 711 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 OAZ2O95190 189 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 ECEL1O95672 775 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 GAS8O95995 478 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 ACAT1P24752 427 aaKnown RBP11.54□□□□□ -0.56
VTI1A-204ENST00000480057 FLT3P36888 993 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 BRCC3P46736 316 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 CARSP49589 748 aaKnown RBP11.54□□□□□ -0.56
VTI1A-204ENST00000480057 MRPS5P82675 430 aaKnown RBP11.54□□□□□ -0.56
VTI1A-204ENST00000480057 ADCY1Q08828 1119 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 FAAP100Q0VG06 881 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 GPS2Q13227 327 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 PDK2Q15119 407 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 RAB41Q5JT25 222 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 DAB2IPQ5VWQ8 1189 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 OVOS1Q6IE37 1185 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 TRNP1Q6NT89 227 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 TTC27Q6P3X3 843 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 MFSD7Q6UXD7 560 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 ADAT2Q7Z6V5 191 aaKnown RBP11.54□□□□□ -0.56
VTI1A-204ENST00000480057 PSTKQ8IV42 348 aaKnown RBP11.54□□□□□ -0.56
VTI1A-204ENST00000480057 MAP7D3Q8IWC1 876 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 SCUBE3Q8IX30 993 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 CRIPAKQ8N1N5 446 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 ATL2Q8NHH9 583 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 CCHCR1Q8TD31 782 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 IRGQQ8WZA9 623 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 RNF25Q96BH1 459 aaPredicted RBP11.54□□□□□ -0.56
VTI1A-204ENST00000480057 PCED1BQ96HM7 432 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 LPIN3Q9BQK8 851 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 TRIM62Q9BVG3 475 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 OXCT2Q9BYC2 517 aaPredicted RBP11.54□□□□□ -0.56
VTI1A-204ENST00000480057 PRDM16Q9HAZ2 1276 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 CNGB3Q9NQW8 809 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 KRT82Q9NSB4 513 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 TMEM51Q9NW97 253 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 RRN3Q9NYV6 651 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.54□□□□□ -0.56
VTI1A-204ENST00000480057 LRFN2Q9ULH4 789 aa11.54□□□□□ -0.56
VTI1A-204ENST00000480057 DRG1Q9Y295 367 aaKnown RBP11.54□□□□□ -0.56
VTI1A-204ENST00000480057 MYBPHLA2RUH7 354 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 LRRD1A4D1F6 860 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 NDC80O14777 642 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 PRPSAP2O60256 369 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 AP1G2O75843 785 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 SASH3O75995 380 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 MYBL2P10244 700 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 TCF4P15884 667 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 KDELR1P24390 212 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 IGFBP6P24592 240 aaPredicted RBP11.53□□□□□ -0.56
VTI1A-204ENST00000480057 IL1R2P27930 398 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 GJC1P36383 396 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 MATKP42679 507 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 ARSEP51690 589 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 YWHAHQ04917 246 aaPredicted RBP11.53□□□□□ -0.56
VTI1A-204ENST00000480057 RNASELQ05823 741 aaKnown RBP11.53□□□□□ -0.56
VTI1A-204ENST00000480057 ELAVL2Q12926 359 aaKnown RBP11.53□□□□□ -0.56
VTI1A-204ENST00000480057 SPDYCQ5MJ68 293 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 ZFYVE27Q5T4F4 411 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms