RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 YWHAQP27348 245 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 MAGEA9P43362 315 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 STX17P56962 302 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 MAP3K7CLP57077 242 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 SLC8A3P57103 927 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 CSTF1Q05048 431 aaKnown RBP9.64□□□□□ -0.87
CMTM1-208ENST00000479381 LRRC63Q05C16 580 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 MTF1Q14872 753 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 PON2Q15165 354 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 ITPRIPL2Q3MIP1 535 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 TRIM68Q6AZZ1 485 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 C1orf228Q6PIY5 440 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 NYAP1Q6ZVC0 841 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 FRMD5Q7Z6J6 570 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 MON1AQ86VX9 555 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 C1orf210Q8IVY1 113 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 NUP93Q8N1F7 819 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 CPA6Q8N4T0 437 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 TTC13Q8NBP0 860 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 SLC2A14Q8TDB8 520 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 TAS1R2Q8TE23 839 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 NELFBQ8WX92 580 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 NKD2Q969F2 451 aaPredicted RBP9.64□□□□□ -0.87
CMTM1-208ENST00000479381 TRMT2BQ96GJ1 504 aaKnown RBP9.64□□□□□ -0.87
CMTM1-208ENST00000479381 MSANTD3Q96H12 275 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 PHOX2BQ99453 314 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 MKNK1Q9BUB5 465 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 NT5C1AQ9BXI3 368 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 B3GNT5Q9BYG0 378 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 NIF3L1Q9GZT8 377 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 EBF3Q9H4W6 596 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 LMAN1LQ9HAT1 526 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 TRPV4Q9HBA0 871 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 GKN1Q9NS71 199 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 DUS2Q9NX74 493 aaKnown RBP9.64□□□□□ -0.87
CMTM1-208ENST00000479381 SMPD4Q9NXE4 827 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 OBP2AQ9NY56 170 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 ARMCX3Q9UH62 379 aaPredicted RBP9.64□□□□□ -0.87
CMTM1-208ENST00000479381 TSR3Q9UJK0 312 aaKnown RBP9.64□□□□□ -0.87
CMTM1-208ENST00000479381 MAN1B1Q9UKM7 699 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 SH3BP1Q9Y3L3 701 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 MTF2Q9Y483 593 aaPredicted RBP9.64□□□□□ -0.87
CMTM1-208ENST00000479381 MUC6Q6W4X9 2439 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 COL4A3Q01955 1670 aa9.64□□□□□ -0.87
CMTM1-208ENST00000479381 C2orf78A6NCI8 922 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 SPECC1L-ADORA2AF8WAN1 911 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 SLC16A3O15427 465 aaKnown RBP9.63□□□□□ -0.87
CMTM1-208ENST00000479381 ASS1P00966 412 aaKnown RBP9.63□□□□□ -0.87
CMTM1-208ENST00000479381 IRF1P10914 325 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 CD19P15391 556 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 UBE2HP62256 183 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 YWHAEP62258 255 aaKnown RBP9.63□□□□□ -0.87
CMTM1-208ENST00000479381 TNK2Q07912 1038 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 PPP3CAQ08209 521 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 LRMPQ12912 555 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 TAF10Q12962 218 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 NR1H3Q13133 447 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 CAMK4Q16566 473 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 NFIL3Q16649 462 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 ANKRD40Q6AI12 368 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 UNC93AQ86WB7 457 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 FBXL13Q8NEE6 735 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 PDZD8Q8NEN9 1154 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 SH3RF2Q8TEC5 729 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 ATRIPQ8WXE1 791 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 USP13Q92995 863 aaPredicted RBP9.63□□□□□ -0.87
CMTM1-208ENST00000479381 RSPRY1Q96DX4 576 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 SPATA17Q96L03 361 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 C8orf48Q96LL4 319 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 HEXIM2Q96MH2 286 aaKnown RBP9.63□□□□□ -0.87
CMTM1-208ENST00000479381 CYP2S1Q96SQ9 504 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 PKMYT1Q99640 499 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 SDCBP2Q9H190 292 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 XYLT2Q9H1B5 865 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 VRTNQ9H8Y1 702 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 CYP3A43Q9HB55 503 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 METTL14Q9HCE5 456 aaKnown RBP9.63□□□□□ -0.87
CMTM1-208ENST00000479381 CCL26Q9Y258 94 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 R4GN57 208 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 MYO16Q9Y6X6 1858 aa9.63□□□□□ -0.87
CMTM1-208ENST00000479381 NCANO14594 1321 aa9.62□□□□□ -0.87
CMTM1-208ENST00000479381 OBSL1O75147 1896 aa9.62□□□□□ -0.87
CMTM1-208ENST00000479381 KIF26AQ9ULI4 1882 aaPredicted RBP9.62□□□□□ -0.87
CMTM1-208ENST00000479381 SCAMP3O14828 347 aaKnown RBP9.62□□□□□ -0.87
CMTM1-208ENST00000479381 NFATC1O95644 943 aa9.62□□□□□ -0.87
CMTM1-208ENST00000479381 FGFR1OPO95684 399 aaKnown RBP9.62□□□□□ -0.87
CMTM1-208ENST00000479381 GLULP15104 373 aa9.62□□□□□ -0.87
CMTM1-208ENST00000479381 GTF2H1P32780 548 aa9.62□□□□□ -0.87
CMTM1-208ENST00000479381 CTHP32929 405 aa9.62□□□□□ -0.87
CMTM1-208ENST00000479381 ASPAP45381 313 aa9.62□□□□□ -0.87
CMTM1-208ENST00000479381 PPP3CCP48454 512 aa9.62□□□□□ -0.87
CMTM1-208ENST00000479381 SLC5A3P53794 718 aa9.62□□□□□ -0.87
CMTM1-208ENST00000479381 USP46P62068 366 aa9.62□□□□□ -0.87
CMTM1-208ENST00000479381 GOLGA8FQ08AF8 430 aa9.62□□□□□ -0.87
CMTM1-208ENST00000479381 GOLGA8DPQ0D2H9 430 aa9.62□□□□□ -0.87
CMTM1-208ENST00000479381 FCHO2Q0JRZ9 810 aa9.62□□□□□ -0.87
CMTM1-208ENST00000479381 GRSF1Q12849 480 aaKnown RBP eCLIP9.62□□□□□ -0.87
CMTM1-208ENST00000479381 PAK1Q13153 545 aa9.62□□□□□ -0.87
CMTM1-208ENST00000479381 RUNX3Q13761 415 aa9.62□□□□□ -0.87
CMTM1-208ENST00000479381 PDGFRLQ15198 375 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms