RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 RASSF2P50749 326 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 CCR3P51677 355 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 PSMC1P62191 440 aaKnown RBP11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 NOMO3P69849 1222 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 BBS9Q3SYG4 887 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 MSS51Q4VC12 460 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 ANKRD22Q5VYY1 191 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 B3GNT6Q6ZMB0 384 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 C3orf62Q6ZUJ4 267 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 CENPUQ71F23 418 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 CLNKQ7Z7G1 428 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 RMDN3Q96TC7 470 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 APOBEC3GQ9HC16 384 aaKnown RBP11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 MRPL47Q9HD33 250 aaKnown RBP11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 PSMC3IPQ9P2W1 217 aaPredicted RBP11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 HEY2Q9UBP5 337 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 RPL26L1Q9UNX3 145 aaKnown RBP11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 AHDC1Q5TGY3 1603 aaPredicted RBP11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 S100A1P23297 94 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 CHRNA5P30532 468 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 TMED10P49755 219 aaKnown RBP11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 GDF10P55107 478 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 CAMK2BQ13554 666 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 BCL2A1Q16548 175 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 HIF1AQ16665 826 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 CYP4A22Q5TCH4 519 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 FEZF2Q8TBJ5 459 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 FNDC8Q8TC99 324 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 TMC2Q8TDI7 906 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 SYTL5Q8TDW5 730 aaPredicted RBP11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 GFM2Q969S9 779 aaKnown RBP11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 TTC17Q96AE7 1141 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 SLITRK1Q96PX8 696 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 SENP7Q9BQF6 1050 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 TIMMDC1Q9NPL8 285 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 GINM1Q9NU53 330 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 SEPT9Q9UHD8 586 aaPredicted RBP11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 SMG5Q9UPR3 1016 aaKnown RBP11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 PRELID1Q9Y255 219 aa11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 FAM32AQ9Y421 112 aaKnown RBP11.53□□□□□ -0.56
LRRFIP1-211ENST00000478958 KANSL1LA0AUZ9 987 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 WDR64B1ANS9 1081 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 BTBD19C9JJ37 291 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 PMM2O15305 246 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 PRPF4O43172 522 aaKnown RBP eCLIP11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 SERPINB7O75635 380 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 KRT36O76013 467 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 NAT2P11245 290 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 GLRA2P23416 452 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 MARK3P27448 753 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 CAP2P40123 477 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 NEK3P51956 506 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 GPX6P59796 221 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 MDH1BQ5I0G3 518 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 C6orf183Q5T699 404 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 SWSAP1Q6NVH7 229 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 KLHL35Q6PF15 583 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 TTC7BQ86TV6 843 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 C4orf19Q8IY42 314 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 SEPT12Q8IYM1 358 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 ABRAQ8N0Z2 381 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 GAB3Q8WWW8 586 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 ARL8BQ9NVJ2 186 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 STK32BQ9NY57 414 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 ARMCX1Q9P291 453 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 AGTPBP1Q9UPW5 1226 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 ZNF536O15090 1300 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 CCDC160A6NGH7 325 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 SPDYE16A6NNV3 312 aaPredicted RBP11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 TYROBPO43914 113 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 ADCY3O60266 1144 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 ZNF862O60290 1169 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 ICAM1P05362 532 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 ABHD2P08910 425 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 PTPN4P29074 926 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 HSD17B4P51659 736 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 EMP3P54852 163 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 NR1H3Q13133 447 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 CUL2Q13617 745 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 MTERF2Q49AM1 385 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 FNBP1LQ5T0N5 605 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 SATL1Q86VE3 508 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 ALLCQ8N6M5 410 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 SCAIQ8N9R8 606 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 STMN2Q93045 179 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 TMEM143Q96AN5 459 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 MCUR1Q96AQ8 359 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 PAFAH2Q99487 392 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 CADM1Q9BY67 442 aaKnown RBP11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 NDEL1Q9GZM8 345 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 ST6GALNAC4Q9H4F1 302 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 TBC1D22BQ9NU19 505 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 NDUFA13Q9P0J0 144 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 HERC5Q9UII4 1024 aaKnown RBP11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 FBXO9Q9UK97 447 aaPredicted RBP11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 TBC1D30Q9Y2I9 924 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 UBIAD1Q9Y5Z9 338 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 SIPA1L1O43166 1804 aa11.52□□□□□ -0.57
LRRFIP1-211ENST00000478958 MAGEB2O15479 319 aa11.51□□□□□ -0.57
LRRFIP1-211ENST00000478958 OR6B1O95007 311 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms