RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 GALNT7Q86SF2 657 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 CCDC83Q8IWF9 413 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 REXO1L1PQ8IX06 675 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 KLHL36Q8N4N3 616 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 SMYD1Q8NB12 490 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 SLC4A11Q8NBS3 891 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 NUDT10Q8NFP7 164 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 FEZF2Q8TBJ5 459 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 MDM1Q8TC05 714 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 ATP2A3Q93084 1043 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 FERMT2Q96AC1 680 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 CLIP3Q96DZ5 547 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 NUDT11Q96G61 164 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 SPATA17Q96L03 361 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 TTC1Q99614 292 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 GAL3ST1Q99999 423 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 TUBA1CQ9BQE3 449 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 MENTQ9BUN1 341 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 STK31Q9BXU1 1019 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 AGXT2Q9BYV1 514 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 BRD8Q9H0E9 1235 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 SYNCQ9H7C4 482 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 DNAJC18Q9H819 358 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 CRLF2Q9HC73 371 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 TM9SF3Q9HD45 589 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 WASH6PQ9NQA3 447 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 ANLNQ9NQW6 1124 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 SPTLC3Q9NUV7 552 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 MCM9Q9NXL9 1143 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 TBC1D14Q9P2M4 693 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 JAG2Q9Y219 1238 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 KIF21BO75037 1637 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 KDM5BQ9UGL1 1544 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 WDR7Q9Y4E6 1490 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 UACAQ9BZF9 1416 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 FLT1P17948 1338 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 MYO3BQ8WXR4 1341 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 ABCA8O94911 1581 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 A0A0G2JPF8 293 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 UBA6A0AVT1 1052 aaPredicted RBP3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 RRN3P2A6NIE6 340 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 HNRNPCL3B7ZW38 293 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 SGK1O00141 431 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 ASAP2O43150 1006 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 CEP104O60308 925 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 ZEB2O60315 1214 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 TSPAN1O60635 241 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 EPN2O95208 641 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 SGPL1O95470 568 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 TBX18O95935 607 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 PRLP01236 227 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 HNRNPCL4P0DMR1 293 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 DLATP10515 647 aaKnown RBP3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 EPB41P11171 864 aaKnown RBP3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 CKBP12277 381 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 ALAS1P13196 640 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 SCG2P13521 617 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 TMEM11P17152 192 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 BPIP17213 487 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 ARF4P18085 180 aaPredicted RBP3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 LAG3P18627 525 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 CD40P25942 277 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 IL6STP40189 918 aaPredicted RBP3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 HADHAP40939 763 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 NPTX2P47972 431 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 MCM2P49736 904 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 SULT1E1P49888 294 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 GPC3P51654 580 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 CCNHP51946 323 aaPredicted RBP3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 SLC26A5P58743 744 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 B2MP61769 119 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 KRT85P78386 507 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 SMAD3P84022 425 aaKnown RBP3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 SLC6A3Q01959 620 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 KLHL30Q0D2K2 578 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 AP1B1Q10567 949 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 TFCP2Q12800 502 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 MAP3K12Q12852 859 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 FAPQ12884 760 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 TRAP1Q12931 704 aaKnown RBP3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 NFATC3Q12968 1075 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 STRN3Q13033 797 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 TUBA3CQ13748 450 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 STAT4Q14765 748 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 SMUG1Q53HV7 270 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 FBLN7Q53RD9 439 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 ODF2Q5BJF6 829 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 CCDC183Q5T5S1 534 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 KANK2Q63ZY3 851 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 GPR139Q6DWJ6 353 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 PM20D1Q6GTS8 502 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 SLFN12LQ6IEE8 588 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 CAPRIN2Q6IMN6 1127 aaKnown RBP3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 CORO6Q6QEF8 472 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 B3GNT9Q6UX72 402 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 LEKR1Q6ZMV7 388 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 Q6ZUG5 572 aa3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 PDZD4Q76G19 769 aaPredicted RBP3.78□□□□□ -1.8
FNDC3B-209ENST00000478016 OTOP2Q7RTS6 562 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms