RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 CFHR1Q03591 330 aa4.24□□□□□ -1.73
NCKAP1-204ENST00000477988 ZNF549Q6P9A3 640 aa4.24□□□□□ -1.73
NCKAP1-204ENST00000477988 UBE2Q1Q7Z7E8 422 aa4.24□□□□□ -1.73
NCKAP1-204ENST00000477988 CAND1Q86VP6 1230 aaKnown RBP4.24□□□□□ -1.73
NCKAP1-204ENST00000477988 PPP1R3BQ86XI6 285 aa4.24□□□□□ -1.73
NCKAP1-204ENST00000477988 DCP1BQ8IZD4 617 aaKnown RBP4.24□□□□□ -1.73
NCKAP1-204ENST00000477988 TMX1Q9H3N1 280 aa4.24□□□□□ -1.73
NCKAP1-204ENST00000477988 TRMT13Q9NUP7 481 aaKnown RBP4.24□□□□□ -1.73
NCKAP1-204ENST00000477988 C4orf47A7E2U8 309 aa4.23□□□□□ -1.73
NCKAP1-204ENST00000477988 AP4M1O00189 453 aa4.23□□□□□ -1.73
NCKAP1-204ENST00000477988 AHSGP02765 367 aa4.23□□□□□ -1.73
NCKAP1-204ENST00000477988 CYP19A1P11511 503 aaPredicted RBP4.23□□□□□ -1.73
NCKAP1-204ENST00000477988 CYP2C9P11712 490 aa4.23□□□□□ -1.73
NCKAP1-204ENST00000477988 TYRP14679 529 aa4.23□□□□□ -1.73
NCKAP1-204ENST00000477988 DEPDC1Q5TB30 811 aa4.23□□□□□ -1.73
NCKAP1-204ENST00000477988 EFCAB2Q5VUJ9 269 aa4.23□□□□□ -1.73
NCKAP1-204ENST00000477988 IZUMO1Q8IYV9 350 aa4.23□□□□□ -1.73
NCKAP1-204ENST00000477988 ABRAQ8N0Z2 381 aa4.23□□□□□ -1.73
NCKAP1-204ENST00000477988 PELI3Q8N2H9 469 aa4.23□□□□□ -1.73
NCKAP1-204ENST00000477988 CAMK1GQ96NX5 476 aa4.23□□□□□ -1.73
NCKAP1-204ENST00000477988 PRR25Q96S07 402 aa4.23□□□□□ -1.73
NCKAP1-204ENST00000477988 MCM8Q9UJA3 840 aa4.23□□□□□ -1.73
NCKAP1-204ENST00000477988 MAFFQ9ULX9 164 aa4.23□□□□□ -1.73
NCKAP1-204ENST00000477988 MYBL2P10244 700 aa4.22□□□□□ -1.73
NCKAP1-204ENST00000477988 MYO1EQ12965 1108 aa4.22□□□□□ -1.73
NCKAP1-204ENST00000477988 TMTC4Q5T4D3 741 aa4.22□□□□□ -1.73
NCKAP1-204ENST00000477988 SYDE2Q5VT97 1194 aa4.22□□□□□ -1.73
NCKAP1-204ENST00000477988 MMP21Q8N119 569 aa4.22□□□□□ -1.73
NCKAP1-204ENST00000477988 BRIX1Q8TDN6 353 aaKnown RBP4.22□□□□□ -1.73
NCKAP1-204ENST00000477988 WBP1Q96G27 269 aa4.22□□□□□ -1.73
NCKAP1-204ENST00000477988 MLXIPQ9HAP2 919 aa4.22□□□□□ -1.73
NCKAP1-204ENST00000477988 LMBRD1Q9NUN5 540 aa4.22□□□□□ -1.73
NCKAP1-204ENST00000477988 PNPOQ9NVS9 261 aa4.22□□□□□ -1.73
NCKAP1-204ENST00000477988 GAR1Q9NY12 217 aaKnown RBP4.22□□□□□ -1.73
NCKAP1-204ENST00000477988 SHTN1A0MZ66 631 aa4.21□□□□□ -1.74
NCKAP1-204ENST00000477988 TLDC2A0PJX2 215 aa4.21□□□□□ -1.74
NCKAP1-204ENST00000477988 LACTBL1A8MY62 500 aa4.21□□□□□ -1.74
NCKAP1-204ENST00000477988 hCG_1984214I3L0E3 225 aa4.21□□□□□ -1.74
NCKAP1-204ENST00000477988 M0R3H8 397 aa4.21□□□□□ -1.74
NCKAP1-204ENST00000477988 DTNBO60941 627 aa4.21□□□□□ -1.74
NCKAP1-204ENST00000477988 UNC5CO95185 931 aa4.21□□□□□ -1.74
NCKAP1-204ENST00000477988 GRPP07492 148 aa4.21□□□□□ -1.74
NCKAP1-204ENST00000477988 XRCC6P12956 609 aaKnown RBP eCLIP4.21□□□□□ -1.74
NCKAP1-204ENST00000477988 SUMO2P61956 95 aaKnown RBP4.21□□□□□ -1.74
NCKAP1-204ENST00000477988 PSG6Q00889 435 aa4.21□□□□□ -1.74
NCKAP1-204ENST00000477988 EXOSC9Q06265 439 aaKnown RBP4.21□□□□□ -1.74
NCKAP1-204ENST00000477988 LARS2Q15031 903 aaKnown RBP4.21□□□□□ -1.74
NCKAP1-204ENST00000477988 DENND2CQ68D51 928 aa4.21□□□□□ -1.74
NCKAP1-204ENST00000477988 GSG1LQ6UXU4 331 aa4.21□□□□□ -1.74
NCKAP1-204ENST00000477988 ZPBPQ9BS86 351 aa4.21□□□□□ -1.74
NCKAP1-204ENST00000477988 XPR1Q9UBH6 696 aa4.21□□□□□ -1.74
NCKAP1-204ENST00000477988 MRPS17Q9Y2R5 130 aaKnown RBP4.21□□□□□ -1.74
NCKAP1-204ENST00000477988 PCDHA1Q9Y5I3 950 aa4.21□□□□□ -1.74
NCKAP1-204ENST00000477988 PSMD9O00233 223 aa4.2□□□□□ -1.74
NCKAP1-204ENST00000477988 GAS8-AS1O95177 125 aa4.2□□□□□ -1.74
NCKAP1-204ENST00000477988 FTLP02792 175 aaPredicted RBP4.2□□□□□ -1.74
NCKAP1-204ENST00000477988 GKP32189 559 aa4.2□□□□□ -1.74
NCKAP1-204ENST00000477988 WNT3P56703 355 aa4.2□□□□□ -1.74
NCKAP1-204ENST00000477988 ZXDBP98169 803 aa4.2□□□□□ -1.74
NCKAP1-204ENST00000477988 HSF1Q00613 529 aa4.2□□□□□ -1.74
NCKAP1-204ENST00000477988 TMEM65Q6PI78 240 aa4.2□□□□□ -1.74
NCKAP1-204ENST00000477988 RAB11FIP4Q86YS3 637 aa4.2□□□□□ -1.74
NCKAP1-204ENST00000477988 MIER2Q8N344 545 aa4.2□□□□□ -1.74
NCKAP1-204ENST00000477988 CXorf36Q9H7Y0 433 aa4.2□□□□□ -1.74
NCKAP1-204ENST00000477988 SELENONQ9NZV5 590 aa4.2□□□□□ -1.74
NCKAP1-204ENST00000477988 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.2□□□□□ -1.74
NCKAP1-204ENST00000477988 OBSCNQ5VST9 7968 aa4.2□□□□□ -1.74
NCKAP1-204ENST00000477988 SLC28A2O43868 658 aa4.19□□□□□ -1.74
NCKAP1-204ENST00000477988 PMPCBO75439 489 aa4.19□□□□□ -1.74
NCKAP1-204ENST00000477988 HDCP19113 662 aa4.19□□□□□ -1.74
NCKAP1-204ENST00000477988 ADORA2AP29274 412 aa4.19□□□□□ -1.74
NCKAP1-204ENST00000477988 DGKEP52429 567 aa4.19□□□□□ -1.74
NCKAP1-204ENST00000477988 MTX1Q13505 466 aa4.19□□□□□ -1.74
NCKAP1-204ENST00000477988 PCBP2Q15366 365 aaKnown RBP eCLIP4.19□□□□□ -1.74
NCKAP1-204ENST00000477988 LY6KQ17RY6 165 aa4.19□□□□□ -1.74
NCKAP1-204ENST00000477988 ABCB5Q2M3G0 1257 aa4.19□□□□□ -1.74
NCKAP1-204ENST00000477988 ZNF585BQ52M93 769 aa4.19□□□□□ -1.74
NCKAP1-204ENST00000477988 RANBP10Q6VN20 620 aa4.19□□□□□ -1.74
NCKAP1-204ENST00000477988 PNMA8AQ86V59 439 aaPredicted RBP4.19□□□□□ -1.74
NCKAP1-204ENST00000477988 PRR18Q8N4B5 295 aa4.19□□□□□ -1.74
NCKAP1-204ENST00000477988 LINC01465Q8N7H1 131 aa4.19□□□□□ -1.74
NCKAP1-204ENST00000477988 PCSK9Q8NBP7 692 aaKnown RBP4.19□□□□□ -1.74
NCKAP1-204ENST00000477988 MESP1Q9BRJ9 268 aa4.19□□□□□ -1.74
NCKAP1-204ENST00000477988 TMEM204Q9BSN7 226 aa4.19□□□□□ -1.74
NCKAP1-204ENST00000477988 ZBTB40Q9NUA8 1239 aa4.19□□□□□ -1.74
NCKAP1-204ENST00000477988 PRKAB1Q9Y478 270 aa4.19□□□□□ -1.74
NCKAP1-204ENST00000477988 FOXN3O00409 490 aaPredicted RBP4.18□□□□□ -1.74
NCKAP1-204ENST00000477988 CES2O00748 559 aa4.18□□□□□ -1.74
NCKAP1-204ENST00000477988 THP07101 528 aa4.18□□□□□ -1.74
NCKAP1-204ENST00000477988 PDCP20941 246 aa4.18□□□□□ -1.74
NCKAP1-204ENST00000477988 SOX8P57073 446 aa4.18□□□□□ -1.74
NCKAP1-204ENST00000477988 LMAN2Q12907 356 aa4.18□□□□□ -1.74
NCKAP1-204ENST00000477988 SEC23BQ15437 767 aa4.18□□□□□ -1.74
NCKAP1-204ENST00000477988 ZNF750Q32MQ0 723 aa4.18□□□□□ -1.74
NCKAP1-204ENST00000477988 MGAT5BQ3V5L5 792 aa4.18□□□□□ -1.74
NCKAP1-204ENST00000477988 SLC9C1Q4G0N8 1177 aa4.18□□□□□ -1.74
NCKAP1-204ENST00000477988 VSTM1Q6UX27 236 aa4.18□□□□□ -1.74
NCKAP1-204ENST00000477988 DPY19L3Q6ZPD9 716 aa4.18□□□□□ -1.74
NCKAP1-204ENST00000477988 PTCHD4Q6ZW05 846 aa4.18□□□□□ -1.74
NCKAP1-204ENST00000477988 B4GALNT2Q8NHY0 566 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms