RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 SLC36A4Q6YBV0 504 aa21.67■■□□□ 1.06
PDLIM1-202ENST00000477757 PGBD3Q8N328 593 aa21.67■■□□□ 1.06
PDLIM1-202ENST00000477757 TOP6BLQ8N6T0 577 aa21.67■■□□□ 1.06
PDLIM1-202ENST00000477757 OR2I1PQ8NGU4 316 aa21.67■■□□□ 1.06
PDLIM1-202ENST00000477757 CXorf38Q8TB03 319 aa21.67■■□□□ 1.06
PDLIM1-202ENST00000477757 ADAMTS14Q8WXS8 1223 aa21.67■■□□□ 1.06
PDLIM1-202ENST00000477757 ZDHHC4Q9NPG8 344 aa21.67■■□□□ 1.06
PDLIM1-202ENST00000477757 BLOC1S4Q9NUP1 217 aa21.67■■□□□ 1.06
PDLIM1-202ENST00000477757 TRPM5Q9NZQ8 1165 aa21.67■■□□□ 1.06
PDLIM1-202ENST00000477757 ACACAQ13085 2346 aa21.66■■□□□ 1.06
PDLIM1-202ENST00000477757 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.66■■□□□ 1.06
PDLIM1-202ENST00000477757 KRT18P05783 430 aaKnown RBP21.66■■□□□ 1.06
PDLIM1-202ENST00000477757 ADH5P11766 374 aa21.66■■□□□ 1.06
PDLIM1-202ENST00000477757 ADSSP30520 456 aa21.66■■□□□ 1.06
PDLIM1-202ENST00000477757 LHX1P48742 406 aa21.66■■□□□ 1.06
PDLIM1-202ENST00000477757 ZNF33AQ06730 810 aa21.66■■□□□ 1.06
PDLIM1-202ENST00000477757 SLC14A1Q13336 389 aa21.66■■□□□ 1.06
PDLIM1-202ENST00000477757 DHX8Q14562 1220 aaKnown RBP21.66■■□□□ 1.06
PDLIM1-202ENST00000477757 ARL6IP4Q66PJ3 421 aaKnown RBP21.66■■□□□ 1.06
PDLIM1-202ENST00000477757 RHBDF2Q6PJF5 856 aa21.66■■□□□ 1.06
PDLIM1-202ENST00000477757 VSTM1Q6UX27 236 aa21.66■■□□□ 1.06
PDLIM1-202ENST00000477757 C4orf50Q6ZRC1 276 aa21.66■■□□□ 1.06
PDLIM1-202ENST00000477757 PHTF2Q8N3S3 785 aa21.66■■□□□ 1.06
PDLIM1-202ENST00000477757 POMGNT1Q8WZA1 660 aa21.66■■□□□ 1.06
PDLIM1-202ENST00000477757 TTLL2Q9BWV7 592 aa21.66■■□□□ 1.06
PDLIM1-202ENST00000477757 IKZF4Q9H2S9 585 aa21.66■■□□□ 1.06
PDLIM1-202ENST00000477757 ZHX3Q9H4I2 956 aa21.66■■□□□ 1.06
PDLIM1-202ENST00000477757 ITGA11Q9UKX5 1188 aa21.66■■□□□ 1.06
PDLIM1-202ENST00000477757 SNX9Q9Y5X1 595 aa21.66■■□□□ 1.06
PDLIM1-202ENST00000477757 CPQQ9Y646 472 aa21.66■■□□□ 1.06
PDLIM1-202ENST00000477757 CEP192Q8TEP8 1941 aa21.65■■□□□ 1.06
PDLIM1-202ENST00000477757 ZNF840PA6NDX5 716 aa21.65■■□□□ 1.06
PDLIM1-202ENST00000477757 SCAMP3O14828 347 aaKnown RBP21.65■■□□□ 1.06
PDLIM1-202ENST00000477757 GJB3O75712 270 aa21.65■■□□□ 1.06
PDLIM1-202ENST00000477757 FTH1P19P0C7X4 201 aa21.65■■□□□ 1.06
PDLIM1-202ENST00000477757 USP46P62068 366 aa21.65■■□□□ 1.06
PDLIM1-202ENST00000477757 TRIP6Q15654 476 aaKnown RBP21.65■■□□□ 1.06
PDLIM1-202ENST00000477757 DENND5BQ6ZUT9 1274 aa21.65■■□□□ 1.06
PDLIM1-202ENST00000477757 BRSK2Q8IWQ3 736 aa21.65■■□□□ 1.06
PDLIM1-202ENST00000477757 MYLPFQ96A32 169 aa21.65■■□□□ 1.06
PDLIM1-202ENST00000477757 AK8Q96MA6 479 aa21.65■■□□□ 1.06
PDLIM1-202ENST00000477757 CAMK1GQ96NX5 476 aa21.65■■□□□ 1.06
PDLIM1-202ENST00000477757 CCDC86Q9H6F5 360 aaKnown RBP21.65■■□□□ 1.06
PDLIM1-202ENST00000477757 CALCOCO1Q9P1Z2 691 aa21.65■■□□□ 1.06
PDLIM1-202ENST00000477757 SH3BP5O60239 455 aa21.64■■□□□ 1.05
PDLIM1-202ENST00000477757 OAS1P00973 400 aaKnown RBP21.64■■□□□ 1.05
PDLIM1-202ENST00000477757 SYPP08247 313 aa21.64■■□□□ 1.05
PDLIM1-202ENST00000477757 GABRG2P18507 467 aa21.64■■□□□ 1.05
PDLIM1-202ENST00000477757 MCM6Q14566 821 aa21.64■■□□□ 1.05
PDLIM1-202ENST00000477757 POSTNQ15063 836 aa21.64■■□□□ 1.05
PDLIM1-202ENST00000477757 CCNI2Q6ZMN8 369 aaPredicted RBP21.64■■□□□ 1.05
PDLIM1-202ENST00000477757 TRMT11Q7Z4G4 463 aaKnown RBP21.64■■□□□ 1.05
PDLIM1-202ENST00000477757 KCNV2Q8TDN2 545 aa21.64■■□□□ 1.05
PDLIM1-202ENST00000477757 RAD54LQ92698 747 aa21.64■■□□□ 1.05
PDLIM1-202ENST00000477757 HVCN1Q96D96 273 aa21.64■■□□□ 1.05
PDLIM1-202ENST00000477757 CALML4Q96GE6 196 aa21.64■■□□□ 1.05
PDLIM1-202ENST00000477757 FAM213AQ9BRX8 229 aa21.64■■□□□ 1.05
PDLIM1-202ENST00000477757 RNF38Q9H0F5 515 aa21.64■■□□□ 1.05
PDLIM1-202ENST00000477757 SMPD4Q9NXE4 827 aa21.64■■□□□ 1.05
PDLIM1-202ENST00000477757 EHD2Q9NZN4 543 aa21.64■■□□□ 1.05
PDLIM1-202ENST00000477757 CFAP97Q9P2B7 532 aa21.64■■□□□ 1.05
PDLIM1-202ENST00000477757 A0A1W2PQD8 194 aa21.63■■□□□ 1.05
PDLIM1-202ENST00000477757 ATP2C2O75185 946 aa21.63■■□□□ 1.05
PDLIM1-202ENST00000477757 PLCG1P19174 1290 aa21.63■■□□□ 1.05
PDLIM1-202ENST00000477757 PPP3CCP48454 512 aa21.63■■□□□ 1.05
PDLIM1-202ENST00000477757 SOWAHAQ2M3V2 549 aa21.63■■□□□ 1.05
PDLIM1-202ENST00000477757 SCARA3Q6AZY7 606 aa21.63■■□□□ 1.05
PDLIM1-202ENST00000477757 DDX42Q86XP3 938 aaKnown RBP eCLIP21.63■■□□□ 1.05
PDLIM1-202ENST00000477757 SLC41A1Q8IVJ1 513 aa21.63■■□□□ 1.05
PDLIM1-202ENST00000477757 NAXDQ8IW45 347 aa21.63■■□□□ 1.05
PDLIM1-202ENST00000477757 ETFBKMTQ8IXQ9 262 aa21.63■■□□□ 1.05
PDLIM1-202ENST00000477757 DEFB119Q8N690 84 aa21.63■■□□□ 1.05
PDLIM1-202ENST00000477757 CACTINQ8WUQ7 758 aaKnown RBP21.63■■□□□ 1.05
PDLIM1-202ENST00000477757 COL26A1Q96A83 441 aa21.63■■□□□ 1.05
PDLIM1-202ENST00000477757 SYT15Q9BQS2 421 aa21.63■■□□□ 1.05
PDLIM1-202ENST00000477757 MAGEC2Q9UBF1 373 aaPredicted RBP21.63■■□□□ 1.05
PDLIM1-202ENST00000477757 IGHV1OR15-9A0A0B4J2B8 117 aa21.62■■□□□ 1.05
PDLIM1-202ENST00000477757 PPP1R37O75864 691 aa21.62■■□□□ 1.05
PDLIM1-202ENST00000477757 BDNFP23560 247 aa21.62■■□□□ 1.05
PDLIM1-202ENST00000477757 ANXA13P27216 316 aa21.62■■□□□ 1.05
PDLIM1-202ENST00000477757 PSMC1P62191 440 aaKnown RBP21.62■■□□□ 1.05
PDLIM1-202ENST00000477757 NOP14P78316 857 aaKnown RBP21.62■■□□□ 1.05
PDLIM1-202ENST00000477757 LIMS2Q7Z4I7 341 aa21.62■■□□□ 1.05
PDLIM1-202ENST00000477757 CSGALNACT2Q8N6G5 542 aa21.62■■□□□ 1.05
PDLIM1-202ENST00000477757 ZNF513Q8N8E2 541 aaPredicted RBP21.62■■□□□ 1.05
PDLIM1-202ENST00000477757 KBTBD7Q8WVZ9 684 aa21.62■■□□□ 1.05
PDLIM1-202ENST00000477757 FAM84AQ96KN4 292 aa21.62■■□□□ 1.05
PDLIM1-202ENST00000477757 ZSCAN31Q96LW9 406 aaPredicted RBP21.62■■□□□ 1.05
PDLIM1-202ENST00000477757 HSPA12BQ96MM6 686 aa21.62■■□□□ 1.05
PDLIM1-202ENST00000477757 CRTAC1Q9NQ79 661 aa21.62■■□□□ 1.05
PDLIM1-202ENST00000477757 SIX4Q9UIU6 781 aa21.62■■□□□ 1.05
PDLIM1-202ENST00000477757 CDH9Q9ULB4 789 aa21.62■■□□□ 1.05
PDLIM1-202ENST00000477757 HOXB2P14652 356 aa21.61■■□□□ 1.05
PDLIM1-202ENST00000477757 GRIK1P39086 918 aa21.61■■□□□ 1.05
PDLIM1-202ENST00000477757 UBA7P41226 1012 aa21.61■■□□□ 1.05
PDLIM1-202ENST00000477757 MAPRE1Q15691 268 aaKnown RBP21.61■■□□□ 1.05
PDLIM1-202ENST00000477757 ZNF720Q7Z2F6 126 aa21.61■■□□□ 1.05
PDLIM1-202ENST00000477757 PNPLA1Q8N8W4 532 aa21.61■■□□□ 1.05
PDLIM1-202ENST00000477757 BBC3Q96PG8 261 aaPredicted RBP21.61■■□□□ 1.05
PDLIM1-202ENST00000477757 SCUBE2Q9NQ36 999 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms