RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 MDH1BQ5I0G3 518 aa10.39□□□□□ -0.75
NIFK-205ENST00000477693 GAREM2Q75VX8 874 aa10.39□□□□□ -0.75
NIFK-205ENST00000477693 TMTC1Q8IUR5 882 aa10.39□□□□□ -0.75
NIFK-205ENST00000477693 LRRC8AQ8IWT6 810 aa10.39□□□□□ -0.75
NIFK-205ENST00000477693 CRYBG2Q8N1P7 616 aa10.39□□□□□ -0.75
NIFK-205ENST00000477693 LMO3Q8TAP4 145 aa10.39□□□□□ -0.75
NIFK-205ENST00000477693 SHKBP1Q8TBC3 707 aa10.39□□□□□ -0.75
NIFK-205ENST00000477693 SPATA17Q96L03 361 aa10.39□□□□□ -0.75
NIFK-205ENST00000477693 MYRFLQ96LU7 910 aa10.39□□□□□ -0.75
NIFK-205ENST00000477693 DNAJC7Q99615 494 aa10.39□□□□□ -0.75
NIFK-205ENST00000477693 ELOVL4Q9GZR5 314 aa10.39□□□□□ -0.75
NIFK-205ENST00000477693 IL21Q9HBE4 155 aa10.39□□□□□ -0.75
NIFK-205ENST00000477693 ZNF334Q9HCZ1 680 aaPredicted RBP10.39□□□□□ -0.75
NIFK-205ENST00000477693 C11orf16Q9NQ32 467 aa10.39□□□□□ -0.75
NIFK-205ENST00000477693 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.39□□□□□ -0.75
NIFK-205ENST00000477693 FAM207AQ9NSI2 230 aaPredicted RBP10.39□□□□□ -0.75
NIFK-205ENST00000477693 AIPL1Q9NZN9 384 aa10.39□□□□□ -0.75
NIFK-205ENST00000477693 DUSP12Q9UNI6 340 aa10.39□□□□□ -0.75
NIFK-205ENST00000477693 NUMBLQ9Y6R0 609 aa10.39□□□□□ -0.75
NIFK-205ENST00000477693 DOCK8Q8NF50 2099 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 A0A1W2PRU2 124 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 GFPT2O94808 682 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 NOL4O94818 638 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 SLC9A1P19634 815 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 FECHP22830 423 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 CDC25CP30307 473 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 CASP14P31944 242 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 STAT1P42224 750 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 GPR15P49685 360 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 BPIFB4P59827 614 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 CYP27A1Q02318 531 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 SIGLEC14Q08ET2 396 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 TEAD2Q15562 447 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 PARM1Q6UWI2 310 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 ACOT1Q86TX2 421 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 CCDC170Q8IYT3 715 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 TC2NQ8N9U0 490 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 GPR152Q8TDT2 470 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 WHAMMQ8TF30 809 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 GIPC2Q8TF65 315 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 RSAD2Q8WXG1 361 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 FGF14Q92915 247 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 MCRS1Q96EZ8 462 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 TRMT2BQ96GJ1 504 aaKnown RBP10.38□□□□□ -0.75
NIFK-205ENST00000477693 ASB16Q96NS5 453 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 SPAG5Q96R06 1193 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 CRACR2AQ9BSW2 395 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 LSM14BQ9BX40 385 aaKnown RBP10.38□□□□□ -0.75
NIFK-205ENST00000477693 NT5C1AQ9BXI3 368 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 B3GNT5Q9BYG0 378 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 ZNF518BQ9C0D4 1074 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 GPR88Q9GZN0 384 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 TRPV4Q9HBA0 871 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 UXTQ9UBK9 157 aaPredicted RBP10.38□□□□□ -0.75
NIFK-205ENST00000477693 HMGXB4Q9UGU5 601 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 DOCK6Q96HP0 2047 aa10.38□□□□□ -0.75
NIFK-205ENST00000477693 ATP8B3O60423 1300 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 SLC38A8A6NNN8 435 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 SOBPA7XYQ1 873 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 F8VP50 259 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 ARHGAP6O43182 974 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 ECI2O75521 394 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 TRIOO75962 3097 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 F11P03951 625 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 FERP16591 822 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 GJA1P17302 382 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 FCARP24071 287 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 GABRR2P28476 465 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 WEE1P30291 646 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 GRIK1P39086 918 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 CACNA2D1P54289 1103 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 POLR2FP61218 127 aaKnown RBP10.37□□□□□ -0.75
NIFK-205ENST00000477693 TAF12Q16514 161 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 MEA1Q16626 185 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 PPP1R15BQ5SWA1 713 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 SFMBT2Q5VUG0 894 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 SDHAF4Q5VUM1 108 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 DPY19L2P1Q6NXN4 242 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 TRIM67Q6ZTA4 783 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 PAQR9Q6ZVX9 377 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 TMEM150AQ86TG1 271 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 FAM35AQ86V20 835 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 SCN4BQ8IWT1 228 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 FUKQ8N0W3 1084 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 TXLNBQ8N3L3 684 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 SLC44A3Q8N4M1 653 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 TATDN2Q93075 761 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 ELSPBP1Q96BH3 223 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 ASIC4Q96FT7 647 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 SMARCD1Q96GM5 515 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 C8orf48Q96LL4 319 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 ZSWIM3Q96MP5 696 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 GCNAQ96QF7 691 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 TWNKQ96RR1 684 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 ARID3AQ99856 593 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 BAG1Q99933 345 aaPredicted RBP10.37□□□□□ -0.75
NIFK-205ENST00000477693 GANQ9H2C0 597 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 ATXN3LQ9H3M9 355 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 SMOC2Q9H3U7 446 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 ABHD10Q9NUJ1 306 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms