RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 TCF25Q9BQ70 676 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 ANO3Q9BYT9 981 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 TMEM117Q9H0C3 514 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 RWDD1Q9H446 243 aaPredicted RBP5.18□□□□□ -1.58
CKS1B-207ENST00000477676 ATP6V0A4Q9HBG4 840 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 RIC8AQ9NPQ8 531 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 TMEM161AQ9NX61 479 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 SORCS3Q9UPU3 1222 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 NBEAQ8NFP9 2946 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 LAMA5O15230 3695 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 COL1A2P08123 1366 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 ATG2BQ96BY7 2078 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 ERICH2A1L162 156 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 M0QZ92 97 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 SLC27A2O14975 620 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 N4BP1O75113 896 aaKnown RBP5.17□□□□□ -1.58
CKS1B-207ENST00000477676 CYP7B1O75881 506 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 STBD1O95210 358 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 HOXB8P17481 243 aaPredicted RBP5.17□□□□□ -1.58
CKS1B-207ENST00000477676 LAG3P18627 525 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 KIF5BP33176 963 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 LIFRP42702 1097 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 NLRP11P59045 1033 aaKnown RBP5.17□□□□□ -1.58
CKS1B-207ENST00000477676 SART3Q15020 963 aaKnown RBP5.17□□□□□ -1.58
CKS1B-207ENST00000477676 NECTIN1Q15223 517 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 PPP2R5EQ16537 467 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 UGCGQ16739 394 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 ZNF484Q5JVG2 852 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 RARS2Q5T160 578 aaKnown RBP5.17□□□□□ -1.58
CKS1B-207ENST00000477676 IQCEQ6IPM2 695 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 SWSAP1Q6NVH7 229 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 TRMT1LQ7Z2T5 733 aaKnown RBP5.17□□□□□ -1.58
CKS1B-207ENST00000477676 SGMS1Q86VZ5 419 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 MICU3Q86XE3 530 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 LRRC71Q8N4P6 559 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 FANCBQ8NB91 859 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 LPPQ93052 612 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 LENG9Q96B70 501 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 MRRFQ96E11 262 aaKnown RBP5.17□□□□□ -1.58
CKS1B-207ENST00000477676 TCEANC2Q96MN5 208 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 ZNF558Q96NG5 402 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 CEP89Q96ST8 783 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 LZTS2Q9BRK4 669 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 YIPF4Q9BSR8 244 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 ZBP1Q9H171 429 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 AZI2Q9H6S1 392 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 ELAC1Q9H777 363 aaKnown RBP5.17□□□□□ -1.58
CKS1B-207ENST00000477676 ENTPD7Q9NQZ7 604 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 C1orf112Q9NSG2 853 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 SPG21Q9NZD8 308 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 SEC63Q9UGP8 760 aaKnown RBP5.17□□□□□ -1.58
CKS1B-207ENST00000477676 ING1Q9UK53 422 aaPredicted RBP5.17□□□□□ -1.58
CKS1B-207ENST00000477676 DMXL2Q8TDJ6 3036 aa5.17□□□□□ -1.58
CKS1B-207ENST00000477676 DSPP15924 2871 aaKnown RBP5.17□□□□□ -1.58
CKS1B-207ENST00000477676 AKAP13Q12802 2813 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 ZFYVE26Q68DK2 2539 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 A0A0U1RQF3 1178 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 ANKRD34BA5PLL1 514 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 TMEM150BA6NC51 233 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 CBFA2T2O43439 604 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 NARSO43776 548 aaKnown RBP5.16□□□□□ -1.58
CKS1B-207ENST00000477676 CXCL14O95715 111 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 RPLP2P05387 115 aaKnown RBP5.16□□□□□ -1.58
CKS1B-207ENST00000477676 CYP3A4P08684 503 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 ZNF16P17020 682 aaPredicted RBP5.16□□□□□ -1.58
CKS1B-207ENST00000477676 MCM5P33992 734 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 GNAQP50148 359 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 SLC26A2P50443 739 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 METAP2P50579 478 aaKnown RBP eCLIP5.16□□□□□ -1.58
CKS1B-207ENST00000477676 GPC3P51654 580 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 BCAR1P56945 870 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 EXOSC10Q01780 885 aaKnown RBP5.16□□□□□ -1.58
CKS1B-207ENST00000477676 LONRF3Q496Y0 759 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 JAKMIP3Q5VZ66 844 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 CREB3L3Q68CJ9 461 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 KIAA1841Q6NSI8 718 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 EFCAB12Q6NXP0 572 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 APOA5Q6Q788 366 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 TMC5Q6UXY8 1006 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 NIPA1Q7RTP0 329 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 SKAP1Q86WV1 359 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 PLA2G4DQ86XP0 818 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 CPNE8Q86YQ8 564 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 UBALD2Q8IYN6 164 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 ADSSL1Q8N142 457 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 VPS52Q8N1B4 723 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 LRRC43Q8N309 656 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 ARHGEF39Q8N4T4 335 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 METTL13Q8N6R0 699 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 RSAD2Q8WXG1 361 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 CASP10Q92851 521 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 GJA10Q969M2 543 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 SDF4Q9BRK5 362 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 MTA3Q9BTC8 594 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 BACH2Q9BYV9 841 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 KLC2Q9H0B6 622 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 KLHL25Q9H0H3 589 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 ZNF302Q9NR11 478 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 BARHL2Q9NY43 387 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 GULP1Q9UBP9 304 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms