RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 DEPDC1BQ8WUY9 529 aa18.72■□□□□ 0.59
PTPN7-209ENST00000477554 MRPS31Q92665 395 aaKnown RBP18.72■□□□□ 0.59
PTPN7-209ENST00000477554 LTB4R2Q9NPC1 389 aa18.72■□□□□ 0.59
PTPN7-209ENST00000477554 HPS4Q9NQG7 708 aa18.72■□□□□ 0.59
PTPN7-209ENST00000477554 CISHQ9NSE2 258 aa18.72■□□□□ 0.59
PTPN7-209ENST00000477554 CHORDC1Q9UHD1 332 aaPredicted RBP18.72■□□□□ 0.59
PTPN7-209ENST00000477554 ZNF840PA6NDX5 716 aa18.71■□□□□ 0.59
PTPN7-209ENST00000477554 GALR2O43603 387 aaPredicted RBP18.71■□□□□ 0.59
PTPN7-209ENST00000477554 F5P12259 2224 aa18.71■□□□□ 0.59
PTPN7-209ENST00000477554 ARSAP15289 507 aa18.71■□□□□ 0.59
PTPN7-209ENST00000477554 HOXC13P31276 330 aa18.71■□□□□ 0.59
PTPN7-209ENST00000477554 AVPR1AP37288 418 aa18.71■□□□□ 0.59
PTPN7-209ENST00000477554 SLC5A3P53794 718 aa18.71■□□□□ 0.59
PTPN7-209ENST00000477554 RAD23BP54727 409 aa18.71■□□□□ 0.59
PTPN7-209ENST00000477554 MYL5Q02045 173 aa18.71■□□□□ 0.59
PTPN7-209ENST00000477554 APBA1Q02410 837 aa18.71■□□□□ 0.59
PTPN7-209ENST00000477554 CLEC20AQ6ZU45 233 aa18.71■□□□□ 0.59
PTPN7-209ENST00000477554 UNC93AQ86WB7 457 aa18.71■□□□□ 0.59
PTPN7-209ENST00000477554 TRIM59Q8IWR1 403 aa18.71■□□□□ 0.59
PTPN7-209ENST00000477554 UBR7Q8N806 425 aa18.71■□□□□ 0.59
PTPN7-209ENST00000477554 DTWD2Q8NBA8 298 aa18.71■□□□□ 0.59
PTPN7-209ENST00000477554 BPIFB1Q8TDL5 484 aa18.71■□□□□ 0.59
PTPN7-209ENST00000477554 SMARCD1Q96GM5 515 aa18.71■□□□□ 0.59
PTPN7-209ENST00000477554 TNIP3Q96KP6 325 aa18.71■□□□□ 0.59
PTPN7-209ENST00000477554 IMPG2Q9BZV3 1241 aa18.71■□□□□ 0.59
PTPN7-209ENST00000477554 CYP3A43Q9HB55 503 aa18.71■□□□□ 0.59
PTPN7-209ENST00000477554 CBX8Q9HC52 389 aa18.71■□□□□ 0.59
PTPN7-209ENST00000477554 TDP1Q9NUW8 608 aa18.71■□□□□ 0.59
PTPN7-209ENST00000477554 NDRG2Q9UN36 371 aaKnown RBP18.71■□□□□ 0.59
PTPN7-209ENST00000477554 SIT1Q9Y3P8 196 aa18.71■□□□□ 0.59
PTPN7-209ENST00000477554 PIAS3Q9Y6X2 628 aa18.71■□□□□ 0.59
PTPN7-209ENST00000477554 FAM170BA6NMN3 283 aa18.7■□□□□ 0.58
PTPN7-209ENST00000477554 DPYSL4O14531 572 aa18.7■□□□□ 0.58
PTPN7-209ENST00000477554 CHADO15335 359 aa18.7■□□□□ 0.58
PTPN7-209ENST00000477554 ABL1P00519 1130 aa18.7■□□□□ 0.58
PTPN7-209ENST00000477554 RFX1P22670 979 aa18.7■□□□□ 0.58
PTPN7-209ENST00000477554 WEE1P30291 646 aa18.7■□□□□ 0.58
PTPN7-209ENST00000477554 PFKPQ01813 784 aa18.7■□□□□ 0.58
PTPN7-209ENST00000477554 GAS2L3Q86XJ1 694 aa18.7■□□□□ 0.58
PTPN7-209ENST00000477554 ARHGEF19Q8IW93 802 aa18.7■□□□□ 0.58
PTPN7-209ENST00000477554 IRF7Q92985 503 aa18.7■□□□□ 0.58
PTPN7-209ENST00000477554 WBP2Q969T9 261 aa18.7■□□□□ 0.58
PTPN7-209ENST00000477554 CYFIP2Q96F07 1278 aa18.7■□□□□ 0.58
PTPN7-209ENST00000477554 NT5C1AQ9BXI3 368 aa18.7■□□□□ 0.58
PTPN7-209ENST00000477554 EBF3Q9H4W6 596 aa18.7■□□□□ 0.58
PTPN7-209ENST00000477554 GKN1Q9NS71 199 aa18.7■□□□□ 0.58
PTPN7-209ENST00000477554 GMIPQ9P107 970 aa18.7■□□□□ 0.58
PTPN7-209ENST00000477554 UXTQ9UBK9 157 aaPredicted RBP18.7■□□□□ 0.58
PTPN7-209ENST00000477554 CACNA1IQ9P0X4 2223 aa18.69■□□□□ 0.58
PTPN7-209ENST00000477554 PRKCQQ04759 706 aa18.69■□□□□ 0.58
PTPN7-209ENST00000477554 CUL2Q13617 745 aa18.69■□□□□ 0.58
PTPN7-209ENST00000477554 IQCB1Q15051 598 aa18.69■□□□□ 0.58
PTPN7-209ENST00000477554 ZNF77Q15935 545 aa18.69■□□□□ 0.58
PTPN7-209ENST00000477554 TPD52L1Q16890 204 aaPredicted RBP18.69■□□□□ 0.58
PTPN7-209ENST00000477554 HSP90AA4PQ58FG1 418 aa18.69■□□□□ 0.58
PTPN7-209ENST00000477554 YAF2Q8IY57 180 aa18.69■□□□□ 0.58
PTPN7-209ENST00000477554 NUP93Q8N1F7 819 aa18.69■□□□□ 0.58
PTPN7-209ENST00000477554 AOPEPQ8N6M6 819 aa18.69■□□□□ 0.58
PTPN7-209ENST00000477554 CELF5Q8N6W0 485 aaKnown RBP18.69■□□□□ 0.58
PTPN7-209ENST00000477554 DNASE1L2Q92874 299 aa18.69■□□□□ 0.58
PTPN7-209ENST00000477554 HNRNPABQ99729 332 aaKnown RBP18.69■□□□□ 0.58
PTPN7-209ENST00000477554 FAM83CQ9BQN1 747 aa18.69■□□□□ 0.58
PTPN7-209ENST00000477554 CSNK1G1Q9HCP0 422 aa18.69■□□□□ 0.58
PTPN7-209ENST00000477554 DMAP1Q9NPF5 467 aaPredicted RBP18.69■□□□□ 0.58
PTPN7-209ENST00000477554 OSER1Q9NX31 292 aa18.69■□□□□ 0.58
PTPN7-209ENST00000477554 SMPD4Q9NXE4 827 aa18.69■□□□□ 0.58
PTPN7-209ENST00000477554 CACNA1HO95180 2353 aa18.68■□□□□ 0.58
PTPN7-209ENST00000477554 GOLGA6L19H0YKK7 550 aa18.68■□□□□ 0.58
PTPN7-209ENST00000477554 RNF225M0QZC1 329 aaPredicted RBP18.68■□□□□ 0.58
PTPN7-209ENST00000477554 TULP2O00295 520 aa18.68■□□□□ 0.58
PTPN7-209ENST00000477554 STX10O60499 249 aa18.68■□□□□ 0.58
PTPN7-209ENST00000477554 FGFR1OPO95684 399 aaKnown RBP18.68■□□□□ 0.58
PTPN7-209ENST00000477554 CKMP06732 381 aa18.68■□□□□ 0.58
PTPN7-209ENST00000477554 YWHAQP27348 245 aa18.68■□□□□ 0.58
PTPN7-209ENST00000477554 TPM4P67936 248 aa18.68■□□□□ 0.58
PTPN7-209ENST00000477554 KCNH2Q12809 1159 aa18.68■□□□□ 0.58
PTPN7-209ENST00000477554 DHX40Q8IX18 779 aaKnown RBP18.68■□□□□ 0.58
PTPN7-209ENST00000477554 MAML2Q8IZL2 1156 aaPredicted RBP18.68■□□□□ 0.58
PTPN7-209ENST00000477554 SH3RF2Q8TEC5 729 aa18.68■□□□□ 0.58
PTPN7-209ENST00000477554 FBXO32Q969P5 355 aa18.68■□□□□ 0.58
PTPN7-209ENST00000477554 FAM122AQ96E09 287 aa18.68■□□□□ 0.58
PTPN7-209ENST00000477554 ZSWIM1Q9BR11 485 aa18.68■□□□□ 0.58
PTPN7-209ENST00000477554 LINC00597Q9H2U6 94 aa18.68■□□□□ 0.58
PTPN7-209ENST00000477554 CCSER2Q9H7U1 834 aa18.68■□□□□ 0.58
PTPN7-209ENST00000477554 METTL14Q9HCE5 456 aaKnown RBP18.68■□□□□ 0.58
PTPN7-209ENST00000477554 RBM12Q9NTZ6 932 aaKnown RBP18.68■□□□□ 0.58
PTPN7-209ENST00000477554 OBP2AQ9NY56 170 aa18.68■□□□□ 0.58
PTPN7-209ENST00000477554 IL37Q9NZH6 218 aa18.68■□□□□ 0.58
PTPN7-209ENST00000477554 TRPM5Q9NZQ8 1165 aa18.68■□□□□ 0.58
PTPN7-209ENST00000477554 WNT6Q9Y6F9 365 aa18.68■□□□□ 0.58
PTPN7-209ENST00000477554 TRAV19A0A0A6YYK7 116 aa18.67■□□□□ 0.58
PTPN7-209ENST00000477554 ANTXRLA6NF34 631 aa18.67■□□□□ 0.58
PTPN7-209ENST00000477554 CYP26A1O43174 497 aa18.67■□□□□ 0.58
PTPN7-209ENST00000477554 OAS1P00973 400 aaKnown RBP18.67■□□□□ 0.58
PTPN7-209ENST00000477554 HDCP19113 662 aa18.67■□□□□ 0.58
PTPN7-209ENST00000477554 ACO1P21399 889 aaKnown RBP18.67■□□□□ 0.58
PTPN7-209ENST00000477554 DDX6P26196 483 aaKnown RBP eCLIP18.67■□□□□ 0.58
PTPN7-209ENST00000477554 USP4Q13107 963 aa18.67■□□□□ 0.58
PTPN7-209ENST00000477554 RRAGAQ7L523 313 aa18.67■□□□□ 0.58
PTPN7-209ENST00000477554 RNF214Q8ND24 703 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms