RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 TNFRSF10BO14763 440 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 TRIM66O15016 1216 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 AP5Z1O43299 807 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 SLC26A4O43511 780 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 OPHN1O60890 802 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 PRPF6O94906 941 aaKnown RBP7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 TNNC2P02585 160 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 IRF1P10914 325 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 HNRNPLP14866 589 aaKnown RBP eCLIP7.13□□□□□ -1.274e-9■■■■□ 21.4
RTFDC1-206ENST00000477485 ADSSP30520 456 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 LONP1P36776 959 aaKnown RBP7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 TXLNAP40222 546 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 P2RY2P41231 377 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 DPP6P42658 865 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 USP46P62068 366 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 KCNA1Q09470 495 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 DHCR24Q15392 516 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 SOWAHAQ2M3V2 549 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 ANO4Q32M45 955 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 CFAP221Q4G0U5 840 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 TDRD10Q5VZ19 366 aaKnown RBP7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 BTBD8Q5XKL5 378 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 C19orf48Q6RUI8 117 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 LRSAM1Q6UWE0 723 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 ZNF720Q7Z2F6 126 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 C12orf40Q86WS4 652 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 RGL4Q8IZJ4 473 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 CHCHD4Q8N4Q1 142 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 TOP6BLQ8N6T0 577 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 LRRC52Q8N7C0 313 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 ZNF513Q8N8E2 541 aaPredicted RBP7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 IL17RCQ8NAC3 791 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 OR2I1PQ8NGU4 316 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 HVCN1Q96D96 273 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 FUBP3Q96I24 572 aaKnown RBP eCLIP7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 HPDLQ96IR7 371 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 SLITRK1Q96PX8 696 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 FNBP1Q96RU3 617 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 FIZ1Q96SL8 496 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 TMEM121BQ9BXQ6 578 aaPredicted RBP7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 NACA2Q9H009 215 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 SNX25Q9H3E2 840 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 PDE11AQ9HCR9 933 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 EHD2Q9NZN4 543 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 CCDC39Q9UFE4 941 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 EVLQ9UI08 416 aaPredicted RBP7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 MBD1Q9UIS9 605 aaPredicted RBP7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 CDH9Q9ULB4 789 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 SH3BP1Q9Y3L3 701 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 NEUROG3Q9Y4Z2 214 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 STYXL1Q9Y6J8 313 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 ZFYVE26Q68DK2 2539 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 ASPMQ8IZT6 3477 aa7.13□□□□□ -1.27
RTFDC1-206ENST00000477485 PKD1L2Q7Z442 2459 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 VPS37CA5D8V6 355 aaPredicted RBP7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 F8VP50 259 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 NDUFS2O75306 463 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 BMP15O95972 392 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 HOXB2P14652 356 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 GAP43P17677 238 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 LMO2P25791 158 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 GRIA2P42262 883 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 MAGEA11P43364 429 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 ZXDBP98169 803 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 MESP2Q0VG99 397 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 TAF10Q12962 218 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 SF3A1Q15459 793 aaKnown RBP7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 MAPRE1Q15691 268 aaKnown RBP7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 DUOXA1Q1HG43 343 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 LY6G5CQ5SRR4 150 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 C10orf76Q5T2E6 689 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 L1TD1Q5T7N2 865 aaKnown RBP7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 RRAGBQ5VZM2 374 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 SCARA3Q6AZY7 606 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 SDE2Q6IQ49 451 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 VSTM1Q6UX27 236 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 NUDT18Q6ZVK8 323 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 SV2BQ7L1I2 683 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 DDX42Q86XP3 938 aaKnown RBP eCLIP7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 GPD1LQ8N335 351 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 MINDY1Q8N5J2 469 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 OR6B3Q8NGW1 331 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 KCNN1Q92952 543 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 FBXO32Q969P5 355 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 PCED1BQ96HM7 432 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 EPSTI1Q96J88 318 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 SPATA17Q96L03 361 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 PKMYT1Q99640 499 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 CBWD1Q9BRT8 395 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 MED10Q9BTT4 135 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 RNF38Q9H0F5 515 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 ST6GALNAC4Q9H4F1 302 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 CRTAC1Q9NQ79 661 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 GDAP2Q9NXN4 497 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 CALCOCO1Q9P1Z2 691 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 SLC6A14Q9UN76 642 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 CYP8B1Q9UNU6 501 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 WASF3Q9UPY6 502 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 SMC3Q9UQE7 1217 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms