RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 RHBDF2Q6PJF5 856 aa12.18□□□□□ -0.46
BRCA1-213ENST00000476777 NT5DC4Q86YG4 428 aa12.18□□□□□ -0.46
BRCA1-213ENST00000476777 SPATA2LQ8IUW3 424 aaPredicted RBP12.18□□□□□ -0.46
BRCA1-213ENST00000476777 TMEM86AQ8N2M4 240 aa12.18□□□□□ -0.46
BRCA1-213ENST00000476777 MINDY1Q8N5J2 469 aa12.18□□□□□ -0.46
BRCA1-213ENST00000476777 C1orf127Q8N9H9 656 aa12.18□□□□□ -0.46
BRCA1-213ENST00000476777 OR2I1PQ8NGU4 316 aa12.18□□□□□ -0.46
BRCA1-213ENST00000476777 CXorf38Q8TB03 319 aa12.18□□□□□ -0.46
BRCA1-213ENST00000476777 RNF38Q9H0F5 515 aa12.18□□□□□ -0.46
BRCA1-213ENST00000476777 IKZF4Q9H2S9 585 aa12.18□□□□□ -0.46
BRCA1-213ENST00000476777 ZDHHC4Q9NPG8 344 aa12.18□□□□□ -0.46
BRCA1-213ENST00000476777 ZNF462Q96JM2 2506 aa12.17□□□□□ -0.46
BRCA1-213ENST00000476777 ZNF840PA6NDX5 716 aa12.17□□□□□ -0.46
BRCA1-213ENST00000476777 ARHGAP33O14559 1287 aa12.17□□□□□ -0.46
BRCA1-213ENST00000476777 GABRDO14764 452 aa12.17□□□□□ -0.46
BRCA1-213ENST00000476777 ABCD1P33897 745 aa12.17□□□□□ -0.46
BRCA1-213ENST00000476777 GRIA2P42262 883 aa12.17□□□□□ -0.46
BRCA1-213ENST00000476777 TNFRSF4P43489 277 aa12.17□□□□□ -0.46
BRCA1-213ENST00000476777 USP46P62068 366 aa12.17□□□□□ -0.46
BRCA1-213ENST00000476777 RPL6Q02878 288 aaKnown RBP12.17□□□□□ -0.46
BRCA1-213ENST00000476777 RESTQ13127 1097 aa12.17□□□□□ -0.46
BRCA1-213ENST00000476777 DHX8Q14562 1220 aaKnown RBP12.17□□□□□ -0.46
BRCA1-213ENST00000476777 TRIP6Q15654 476 aaKnown RBP12.17□□□□□ -0.46
BRCA1-213ENST00000476777 COL28A1Q2UY09 1125 aa12.17□□□□□ -0.46
BRCA1-213ENST00000476777 PHTF2Q8N3S3 785 aa12.17□□□□□ -0.46
BRCA1-213ENST00000476777 DEFB119Q8N690 84 aa12.17□□□□□ -0.46
BRCA1-213ENST00000476777 SPATA17Q96L03 361 aa12.17□□□□□ -0.46
BRCA1-213ENST00000476777 CAMK1GQ96NX5 476 aa12.17□□□□□ -0.46
BRCA1-213ENST00000476777 PHF12Q96QT6 1004 aa12.17□□□□□ -0.46
BRCA1-213ENST00000476777 ST6GALNAC4Q9H4F1 302 aa12.17□□□□□ -0.46
BRCA1-213ENST00000476777 ARHGEF4Q9NR80 690 aa12.17□□□□□ -0.46
BRCA1-213ENST00000476777 BLOC1S4Q9NUP1 217 aa12.17□□□□□ -0.46
BRCA1-213ENST00000476777 DNAAF2Q9NVR5 837 aaKnown RBP12.17□□□□□ -0.46
BRCA1-213ENST00000476777 GDAP2Q9NXN4 497 aa12.17□□□□□ -0.46
BRCA1-213ENST00000476777 AGAP1Q9UPQ3 857 aa12.17□□□□□ -0.46
BRCA1-213ENST00000476777 SLC9A3R1O14745 358 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-213ENST00000476777 SCAMP3O14828 347 aaKnown RBP12.16□□□□□ -0.46
BRCA1-213ENST00000476777 SLC26A4O43511 780 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 ATP2C2O75185 946 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 GJB3O75712 270 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 SEC24BO95487 1268 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 OLFM2O95897 454 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 ITGB3P05106 788 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 PCSK1P29120 753 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 LHX1P48742 406 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 TFAMQ00059 246 aaKnown RBP12.16□□□□□ -0.46
BRCA1-213ENST00000476777 KDSRQ06136 332 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 ZNF33AQ06730 810 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 RILPL1Q5EBL4 403 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 ARL6IP4Q66PJ3 421 aaKnown RBP12.16□□□□□ -0.46
BRCA1-213ENST00000476777 CCNI2Q6ZMN8 369 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-213ENST00000476777 RABEPKQ7Z6M1 372 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 ADGRF2Q8IZF7 708 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 PGBD3Q8N328 593 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 TOP6BLQ8N6T0 577 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 LRRC52Q8N7C0 313 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 ADAMTS14Q8WXS8 1223 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 POMGNT1Q8WZA1 660 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 COL26A1Q96A83 441 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 FAM84AQ96KN4 292 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 BBC3Q96PG8 261 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-213ENST00000476777 ZHX3Q9H4I2 956 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 SMPD4Q9NXE4 827 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 TRPM5Q9NZQ8 1165 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 SNX9Q9Y5X1 595 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 CPQQ9Y646 472 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 PTPRQQ9UMZ3 2332 aa12.16□□□□□ -0.46
BRCA1-213ENST00000476777 MYO18BQ8IUG5 2567 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 SH3BP5O60239 455 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 TBCAO75347 108 aaKnown RBP12.15□□□□□ -0.46
BRCA1-213ENST00000476777 ADH1CP00326 375 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 KRT18P05783 430 aaKnown RBP12.15□□□□□ -0.46
BRCA1-213ENST00000476777 FTH1P19P0C7X4 201 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 ADH5P11766 374 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 GABRG2P18507 467 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 PLCG1P19174 1290 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 SLC14A1Q13336 389 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 MCM6Q14566 821 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 POSTNQ15063 836 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 SOWAHAQ2M3V2 549 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 VSTM1Q6UX27 236 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 SLC36A4Q6YBV0 504 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 C4orf50Q6ZRC1 276 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 DENND5BQ6ZUT9 1274 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 ZNF720Q7Z2F6 126 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 SLC41A1Q8IVJ1 513 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 BRSK2Q8IWQ3 736 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 CSGALNACT2Q8N6G5 542 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 PNPLA1Q8N8W4 532 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 ZSWIM2Q8NEG5 633 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 KCNV2Q8TDN2 545 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 CEP295NLQ96MC4 621 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 FAM213AQ9BRX8 229 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 TTLL2Q9BWV7 592 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 CCDC86Q9H6F5 360 aaKnown RBP12.15□□□□□ -0.46
BRCA1-213ENST00000476777 CALCOCO1Q9P1Z2 691 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 CFAP97Q9P2B7 532 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 MAGEC2Q9UBF1 373 aaPredicted RBP12.15□□□□□ -0.46
BRCA1-213ENST00000476777 SIX4Q9UIU6 781 aa12.15□□□□□ -0.46
BRCA1-213ENST00000476777 HCN2Q9UL51 889 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms