RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 ACAD9Q9H845 621 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 SIDT1Q9NXL6 827 aaKnown RBP7.51□□□□□ -1.21
LRCH3-215ENST00000476664 ZDHHC8Q9ULC8 765 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 CA14Q9ULX7 337 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 MYBBP1AQ9BQG0 1328 aaKnown RBP7.51□□□□□ -1.21
LRCH3-215ENST00000476664 USP42Q9H9J4 1324 aaKnown RBP7.51□□□□□ -1.21
LRCH3-215ENST00000476664 COL11A2P13942 1736 aaPredicted RBP7.5□□□□□ -1.21
LRCH3-215ENST00000476664 ANKRD31Q8N7Z5 1873 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 TMEM265A0A087WTH1 108 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 TCRBV5S2A0A599 114 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 WASH4PA8MWX3 477 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 H0Y3Z8 333 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 H3BS24 57 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 KCNQ3O43525 872 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 CNPP09543 421 aaKnown RBP7.5□□□□□ -1.21
LRCH3-215ENST00000476664 BMP3P12645 472 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 PSMA4P25789 261 aaKnown RBP7.5□□□□□ -1.21
LRCH3-215ENST00000476664 APEX1P27695 318 aaKnown RBP7.5□□□□□ -1.21
LRCH3-215ENST00000476664 EPS15P42566 896 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 MCM2P49736 904 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 ALDH18A1P54886 795 aaKnown RBP7.5□□□□□ -1.21
LRCH3-215ENST00000476664 EXOSC9Q06265 439 aaKnown RBP7.5□□□□□ -1.21
LRCH3-215ENST00000476664 EGR3Q06889 387 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 SCAPQ12770 1279 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 TRIM28Q13263 835 aaKnown RBP7.5□□□□□ -1.21
LRCH3-215ENST00000476664 PPP2R5CQ13362 524 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 GPR68Q15743 365 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 CTXN3Q4LDR2 81 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 Q6ZS46 218 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 RAB11FIP2Q7L804 512 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 GPC2Q8N158 579 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 CCHCR1Q8TD31 782 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 UBE2FQ969M7 185 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 ZNF622Q969S3 477 aaKnown RBP eCLIP7.5□□□□□ -1.21
LRCH3-215ENST00000476664 CCDC34Q96HJ3 373 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 JAKMIP1Q96N16 626 aaKnown RBP7.5□□□□□ -1.21
LRCH3-215ENST00000476664 NCAPGQ9BPX3 1015 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 REEP2Q9BRK0 252 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 FDXACB1Q9BRP7 624 aaPredicted RBP7.5□□□□□ -1.21
LRCH3-215ENST00000476664 GLIS2Q9BZE0 524 aaPredicted RBP7.5□□□□□ -1.21
LRCH3-215ENST00000476664 TP63Q9H3D4 680 aaPredicted RBP7.5□□□□□ -1.21
LRCH3-215ENST00000476664 GRPEL1Q9HAV7 217 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 MTMR10Q9NXD2 777 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 MTRRQ9UBK8 725 aa7.5□□□□□ -1.21
LRCH3-215ENST00000476664 C19orf53Q9UNZ5 99 aaPredicted RBP7.5□□□□□ -1.21
LRCH3-215ENST00000476664 CARMIL3Q8ND23 1372 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 FADS2P1A8MWK0 482 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 F2RL2O00254 374 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 KIAA0355O15063 1070 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 HDCP19113 662 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 TGM1P22735 817 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 ABCD3P28288 659 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 ADSLP30566 484 aaPredicted RBP7.49□□□□□ -1.21
LRCH3-215ENST00000476664 ATP6V1E1P36543 226 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 MLH1P40692 756 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 KCNC1P48547 511 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 CLCN7P51798 805 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 BCAT1P54687 386 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 IFI35P80217 286 aaPredicted RBP7.49□□□□□ -1.21
LRCH3-215ENST00000476664 NAA16Q6N069 864 aaPredicted RBP7.49□□□□□ -1.21
LRCH3-215ENST00000476664 RGMBQ6NW40 437 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 PLBD1Q6P4A8 553 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 CASC1Q6TDU7 716 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 USP49Q70CQ1 688 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 USP50Q70EL3 339 aaPredicted RBP7.49□□□□□ -1.21
LRCH3-215ENST00000476664 CPLX4Q7Z7G2 160 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 SLCO6A1Q86UG4 719 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 ADSSL1Q8N142 457 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 SCAMP5Q8TAC9 235 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 WDR48Q8TAF3 677 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 CUL5Q93034 780 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 SH3KBP1Q96B97 665 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 MYRFLQ96LU7 910 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 UHRF1Q96T88 793 aaPredicted RBP7.49□□□□□ -1.21
LRCH3-215ENST00000476664 EDEM3Q9BZQ6 932 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 SIL1Q9H173 461 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 ABHD16BQ9H3Z7 469 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 TMCC3Q9ULS5 477 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 TTC21AQ8NDW8 1320 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 PCDH11XQ9BZA7 1347 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 PCDH11YQ9BZA8 1340 aa7.49□□□□□ -1.21
LRCH3-215ENST00000476664 BCORQ6W2J9 1755 aa7.48□□□□□ -1.21
LRCH3-215ENST00000476664 A0A1W2PPC1 479 aa7.48□□□□□ -1.21
LRCH3-215ENST00000476664 C19orf81C9J6K1 198 aa7.48□□□□□ -1.21
LRCH3-215ENST00000476664 FYB1O15117 783 aa7.48□□□□□ -1.21
LRCH3-215ENST00000476664 HTATSF1O43719 755 aaKnown RBP7.48□□□□□ -1.21
LRCH3-215ENST00000476664 RASSF9O75901 435 aa7.48□□□□□ -1.21
LRCH3-215ENST00000476664 USP1O94782 785 aa7.48□□□□□ -1.21
LRCH3-215ENST00000476664 ALX3O95076 343 aa7.48□□□□□ -1.21
LRCH3-215ENST00000476664 MPIG6BO95866 241 aa7.48□□□□□ -1.21
LRCH3-215ENST00000476664 CLTBP09497 229 aa7.48□□□□□ -1.21
LRCH3-215ENST00000476664 LTA4HP09960 611 aaKnown RBP7.48□□□□□ -1.21
LRCH3-215ENST00000476664 SCG2P13521 617 aa7.48□□□□□ -1.21
LRCH3-215ENST00000476664 MXRA7P84157 204 aa7.48□□□□□ -1.21
LRCH3-215ENST00000476664 MC1RQ01726 317 aa7.48□□□□□ -1.21
LRCH3-215ENST00000476664 CREB5Q02930 508 aa7.48□□□□□ -1.21
LRCH3-215ENST00000476664 CTBP1Q13363 440 aa7.48□□□□□ -1.21
LRCH3-215ENST00000476664 MST1LQ2TV78 715 aa7.48□□□□□ -1.21
LRCH3-215ENST00000476664 GPR139Q6DWJ6 353 aa7.48□□□□□ -1.21
LRCH3-215ENST00000476664 KLHL24Q6TFL4 600 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms