RNA–Protein interactions for RNA: ENST00000475553.1

USP37-208, Transcript of ubiquitin specific peptidase 37, human

TSL 4

Gene USP37, Length 613 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP37-208	ENST00000475553	ATRIP	Q8WXE1	791 aa		6.6	□□□□□ -1.35
USP37-208	ENST00000475553	ASB10	Q8WXI3	467 aa		6.6	□□□□□ -1.35
USP37-208	ENST00000475553	FUBP1	Q96AE4	644 aa	Known RBP	6.6	□□□□□ -1.35
USP37-208	ENST00000475553		Q96MF0	132 aa		6.6	□□□□□ -1.35
USP37-208	ENST00000475553	ZNF747	Q9BV97	191 aa		6.6	□□□□□ -1.35
USP37-208	ENST00000475553	MLST8	Q9BVC4	326 aa		6.6	□□□□□ -1.35
USP37-208	ENST00000475553	ZCWPW1	Q9H0M4	648 aa		6.6	□□□□□ -1.35
USP37-208	ENST00000475553	CXorf36	Q9H7Y0	433 aa		6.6	□□□□□ -1.35
USP37-208	ENST00000475553	GJB4	Q9NTQ9	266 aa		6.6	□□□□□ -1.35
USP37-208	ENST00000475553	RGS17	Q9UGC6	210 aa	Predicted RBP	6.6	□□□□□ -1.35
USP37-208	ENST00000475553	MAN2B2	Q9Y2E5	1009 aa		6.6	□□□□□ -1.35
USP37-208	ENST00000475553	HS3ST4	Q9Y661	456 aa		6.6	□□□□□ -1.35
USP37-208	ENST00000475553	ATP10B	O94823	1461 aa		6.6	□□□□□ -1.35
USP37-208	ENST00000475553	NEO1	Q92859	1461 aa		6.6	□□□□□ -1.35
USP37-208	ENST00000475553	PPM1D	O15297	605 aa		6.59	□□□□□ -1.35
USP37-208	ENST00000475553	YY2	O15391	372 aa		6.59	□□□□□ -1.35
USP37-208	ENST00000475553	TPD52L2	O43399	206 aa	Known RBP	6.59	□□□□□ -1.35
USP37-208	ENST00000475553	TLR5	O60602	858 aa		6.59	□□□□□ -1.35
USP37-208	ENST00000475553	A1BG	P04217	495 aa		6.59	□□□□□ -1.35
USP37-208	ENST00000475553	HKR1	P10072	659 aa		6.59	□□□□□ -1.35
USP37-208	ENST00000475553	EGR2	P11161	476 aa	Predicted RBP	6.59	□□□□□ -1.35
USP37-208	ENST00000475553	CCNI	Q14094	377 aa		6.59	□□□□□ -1.35
USP37-208	ENST00000475553	NPY5R	Q15761	445 aa		6.59	□□□□□ -1.35
USP37-208	ENST00000475553	SLC35G1	Q2M3R5	365 aa		6.59	□□□□□ -1.35
USP37-208	ENST00000475553	ZXDC	Q2QGD7	858 aa	Predicted RBP	6.59	□□□□□ -1.35
USP37-208	ENST00000475553	CERCAM	Q5T4B2	595 aa		6.59	□□□□□ -1.35
USP37-208	ENST00000475553	DEPDC1	Q5TB30	811 aa		6.59	□□□□□ -1.35
USP37-208	ENST00000475553	PGBD2	Q6P3X8	592 aa		6.59	□□□□□ -1.35
USP37-208	ENST00000475553	VWA1	Q6PCB0	445 aa		6.59	□□□□□ -1.35
USP37-208	ENST00000475553	TSHZ1	Q6ZSZ6	1077 aa		6.59	□□□□□ -1.35
USP37-208	ENST00000475553	KCTD20	Q7Z5Y7	419 aa		6.59	□□□□□ -1.35
USP37-208	ENST00000475553	LNX2	Q8N448	690 aa		6.59	□□□□□ -1.35
USP37-208	ENST00000475553	DNAJB14	Q8TBM8	379 aa		6.59	□□□□□ -1.35
USP37-208	ENST00000475553	LPIN2	Q92539	896 aa		6.59	□□□□□ -1.35
USP37-208	ENST00000475553	FKBP10	Q96AY3	582 aa		6.59	□□□□□ -1.35
USP37-208	ENST00000475553	SNX27	Q96L92	541 aa		6.59	□□□□□ -1.35
USP37-208	ENST00000475553	GLOD4	Q9HC38	313 aa		6.59	□□□□□ -1.35
USP37-208	ENST00000475553	GBA2	Q9HCG7	927 aa	Predicted RBP	6.59	□□□□□ -1.35
USP37-208	ENST00000475553	KCTD5	Q9NXV2	234 aa		6.59	□□□□□ -1.35
USP37-208	ENST00000475553	CDC23	Q9UJX2	597 aa		6.59	□□□□□ -1.35
USP37-208	ENST00000475553	ADAMTS3	O15072	1205 aa		6.58	□□□□□ -1.36
USP37-208	ENST00000475553	ORC4	O43929	436 aa		6.58	□□□□□ -1.36
USP37-208	ENST00000475553	SNX2	O60749	519 aa		6.58	□□□□□ -1.36
USP37-208	ENST00000475553	COQ9	O75208	318 aa		6.58	□□□□□ -1.36
USP37-208	ENST00000475553	ZEB1	P37275	1124 aa	Predicted RBP	6.58	□□□□□ -1.36
USP37-208	ENST00000475553	HSPA7	P48741	367 aa		6.58	□□□□□ -1.36
USP37-208	ENST00000475553	COPA	P53621	1224 aa		6.58	□□□□□ -1.36
USP37-208	ENST00000475553	TNFAIP2	Q03169	654 aa		6.58	□□□□□ -1.36
USP37-208	ENST00000475553	TAP1	Q03518	808 aa		6.58	□□□□□ -1.36
USP37-208	ENST00000475553	ABHD18	Q0P651	414 aa		6.58	□□□□□ -1.36
USP37-208	ENST00000475553	EIF2B5	Q13144	721 aa	Known RBP	6.58	□□□□□ -1.36
USP37-208	ENST00000475553	ZIK1	Q3SY52	487 aa	Predicted RBP	6.58	□□□□□ -1.36
USP37-208	ENST00000475553	FNDC7	Q5VTL7	733 aa		6.58	□□□□□ -1.36
USP37-208	ENST00000475553	USP17L6P	Q6QN14	398 aa		6.58	□□□□□ -1.36
USP37-208	ENST00000475553	USP51	Q70EK9	711 aa		6.58	□□□□□ -1.36
USP37-208	ENST00000475553	KRT28	Q7Z3Y7	464 aa		6.58	□□□□□ -1.36
USP37-208	ENST00000475553	SLC44A3	Q8N4M1	653 aa		6.58	□□□□□ -1.36
USP37-208	ENST00000475553	VGLL2	Q8N8G2	317 aa		6.58	□□□□□ -1.36
USP37-208	ENST00000475553	MYCBPAP	Q8TBZ2	947 aa		6.58	□□□□□ -1.36
USP37-208	ENST00000475553	TMEM171	Q8WVE6	324 aa		6.58	□□□□□ -1.36
USP37-208	ENST00000475553	MUL1	Q969V5	352 aa		6.58	□□□□□ -1.36
USP37-208	ENST00000475553	ZNF668	Q96K58	619 aa	Predicted RBP	6.58	□□□□□ -1.36
USP37-208	ENST00000475553	ARPC5L	Q9BPX5	153 aa		6.58	□□□□□ -1.36
USP37-208	ENST00000475553	DNMT3B	Q9UBC3	853 aa	Known RBP	6.58	□□□□□ -1.36
USP37-208	ENST00000475553	USP22	Q9UPT9	525 aa		6.58	□□□□□ -1.36
USP37-208	ENST00000475553	MADD	Q8WXG6	1647 aa		6.58	□□□□□ -1.36
USP37-208	ENST00000475553	BCORL1	Q5H9F3	1711 aa		6.57	□□□□□ -1.36
USP37-208	ENST00000475553	PODXL	O00592	558 aa		6.57	□□□□□ -1.36
USP37-208	ENST00000475553	SLC16A3	O15427	465 aa	Known RBP	6.57	□□□□□ -1.36
USP37-208	ENST00000475553	CHRM2	P08172	466 aa		6.57	□□□□□ -1.36
USP37-208	ENST00000475553	BUD31	P41223	144 aa	Predicted RBP	6.57	□□□□□ -1.36
USP37-208	ENST00000475553	TBCC	Q15814	346 aa		6.57	□□□□□ -1.36
USP37-208	ENST00000475553	MPEG1	Q2M385	716 aa		6.57	□□□□□ -1.36
USP37-208	ENST00000475553	ZNF750	Q32MQ0	723 aa		6.57	□□□□□ -1.36
USP37-208	ENST00000475553	PTCHD3	Q3KNS1	767 aa		6.57	□□□□□ -1.36
USP37-208	ENST00000475553	FCRL6	Q6DN72	434 aa		6.57	□□□□□ -1.36
USP37-208	ENST00000475553	FAM109A	Q8N4B1	249 aa		6.57	□□□□□ -1.36
USP37-208	ENST00000475553	ZNF527	Q8NB42	609 aa		6.57	□□□□□ -1.36
USP37-208	ENST00000475553	ATG4A	Q8WYN0	398 aa		6.57	□□□□□ -1.36
USP37-208	ENST00000475553	TMEM41A	Q96HV5	264 aa		6.57	□□□□□ -1.36
USP37-208	ENST00000475553	ALG8	Q9BVK2	526 aa		6.57	□□□□□ -1.36
USP37-208	ENST00000475553	TRIM5	Q9C035	493 aa		6.57	□□□□□ -1.36
USP37-208	ENST00000475553	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	6.57	□□□□□ -1.36
USP37-208	ENST00000475553	KLC4	Q9NSK0	619 aa		6.57	□□□□□ -1.36
USP37-208	ENST00000475553	TMOD4	Q9NZQ9	345 aa		6.57	□□□□□ -1.36
USP37-208	ENST00000475553	DKK4	Q9UBT3	224 aa		6.57	□□□□□ -1.36
USP37-208	ENST00000475553	CCNL1	Q9UK58	526 aa	Predicted RBP	6.57	□□□□□ -1.36
USP37-208	ENST00000475553	HPSE	Q9Y251	543 aa		6.57	□□□□□ -1.36
USP37-208	ENST00000475553	SSX2IP	Q9Y2D8	614 aa		6.57	□□□□□ -1.36
USP37-208	ENST00000475553	CTTNBP2	Q8WZ74	1663 aa		6.57	□□□□□ -1.36
USP37-208	ENST00000475553	POGZ	Q7Z3K3	1410 aa		6.57	□□□□□ -1.36
USP37-208	ENST00000475553	ABCA9	Q8IUA7	1624 aa		6.57	□□□□□ -1.36
USP37-208	ENST00000475553	DISP3	Q9P2K9	1392 aa		6.57	□□□□□ -1.36
USP37-208	ENST00000475553	DENND4B	O75064	1496 aa	Predicted RBP	6.56	□□□□□ -1.36
USP37-208	ENST00000475553	PSMD9	O00233	223 aa		6.56	□□□□□ -1.36
USP37-208	ENST00000475553	NXPH3	O95157	252 aa		6.56	□□□□□ -1.36
USP37-208	ENST00000475553	ADORA2A	P29274	412 aa		6.56	□□□□□ -1.36
USP37-208	ENST00000475553	EPHA3	P29320	983 aa		6.56	□□□□□ -1.36
USP37-208	ENST00000475553	FOLR3	P41439	243 aa		6.56	□□□□□ -1.36
USP37-208	ENST00000475553	HNRNPM	P52272	730 aa	Known RBP eCLIP	6.56	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms