RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 A6NNZ2 444 aa16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 ELNP15502 786 aa16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 WARSP23381 471 aaKnown RBP16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 HPDP32754 393 aaPredicted RBP16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 ARSEP51690 589 aa16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 GNGT1P63211 74 aa16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 OASLQ15646 514 aaKnown RBP16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 PTGISQ16647 500 aa16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 TUBB8Q3ZCM7 444 aa16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 RPAINQ86UA6 219 aa16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 UHMK1Q8TAS1 419 aaKnown RBP16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 GAD1Q99259 594 aa16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 TMEM121Q9BTD3 319 aa16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 MAK16Q9BXY0 300 aaKnown RBP16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 FRMD8P1Q9BZ68 369 aaPredicted RBP16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 TSPYL2Q9H2G4 693 aaPredicted RBP16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 NGRNQ9NPE2 291 aaKnown RBP16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 SAE1Q9UBE0 346 aaPredicted RBP16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 NOVA2Q9UNW9 492 aaKnown RBP16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 SGK1O00141 431 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 DPYSL4O14531 572 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 GABBR2O75899 941 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 CDH6P55285 790 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 OTUD4Q01804 1114 aaKnown RBP16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 SP3Q02447 781 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 MGAT3Q09327 533 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 NOGQ13253 232 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 RAB6CQ53S08 254 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 SCYL2Q6P3W7 929 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 ARFGAP2Q8N6H7 521 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 B3GALNT2Q8NCR0 500 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 SLC35B2Q8TB61 432 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 ACTL9Q8TC94 416 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 RAB6CQ9H0N0 254 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 CDC42EP4Q9H3Q1 356 aaKnown RBP16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 RSAD1Q9HA92 442 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 TLDC2A0PJX2 215 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 THP07101 528 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 ZSCAN5DPP0CG00 497 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 LCP1P13796 627 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 IRAK1P51617 712 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 UBAP2Q5T6F2 1119 aaKnown RBP16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 EMC10Q5UCC4 262 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 TTC19Q6DKK2 380 aaPredicted RBP16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 GLIS1Q8NBF1 620 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 KLHDC9Q8NEP7 349 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 FAM172AQ8WUF8 416 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 KHSRPQ92945 711 aaKnown RBP eCLIP16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 LPPQ93052 612 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 AGO3Q9H9G7 860 aaKnown RBP16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 LRRC4CQ9HCJ2 640 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 DNAJC17Q9NVM6 304 aaKnown RBP16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 RNF186Q9NXI6 227 aa16.09■□□□□ 0.17
RPUSD3-215ENST00000475470 AOC2O75106 756 aa16.08■□□□□ 0.17
RPUSD3-215ENST00000475470 ETS1P14921 441 aa16.08■□□□□ 0.17
RPUSD3-215ENST00000475470 ACADSBP45954 432 aa16.08■□□□□ 0.17
RPUSD3-215ENST00000475470 CAP1Q01518 475 aa16.08■□□□□ 0.17
RPUSD3-215ENST00000475470 GPS1Q13098 491 aa16.08■□□□□ 0.17
RPUSD3-215ENST00000475470 HIBCHQ6NVY1 386 aaPredicted RBP16.08■□□□□ 0.17
RPUSD3-215ENST00000475470 CROCCP2Q86T23 111 aa16.08■□□□□ 0.17
RPUSD3-215ENST00000475470 OSTM1Q86WC4 334 aa16.08■□□□□ 0.17
RPUSD3-215ENST00000475470 GSTCDQ8NEC7 633 aa16.08■□□□□ 0.17
RPUSD3-215ENST00000475470 CENPFP49454 3210 aa16.08■□□□□ 0.16
RPUSD3-215ENST00000475470 CAND2O75155 1236 aa16.08■□□□□ 0.16
RPUSD3-215ENST00000475470 IFNB1P01574 187 aa16.08■□□□□ 0.16
RPUSD3-215ENST00000475470 SLC8A3P57103 927 aa16.08■□□□□ 0.16
RPUSD3-215ENST00000475470 KRT81Q14533 505 aa16.08■□□□□ 0.16
RPUSD3-215ENST00000475470 BOLA3Q53S33 107 aa16.08■□□□□ 0.16
RPUSD3-215ENST00000475470 WSCD1Q658N2 575 aa16.08■□□□□ 0.16
RPUSD3-215ENST00000475470 MAP7D3Q8IWC1 876 aa16.08■□□□□ 0.16
RPUSD3-215ENST00000475470 PCSK9Q8NBP7 692 aaKnown RBP16.08■□□□□ 0.16
RPUSD3-215ENST00000475470 CLEC4CQ8WTT0 213 aa16.08■□□□□ 0.16
RPUSD3-215ENST00000475470 CYLDQ9NQC7 956 aa16.08■□□□□ 0.16
RPUSD3-215ENST00000475470 CACNG4Q9UBN1 327 aa16.08■□□□□ 0.16
RPUSD3-215ENST00000475470 GIT1Q9Y2X7 761 aa16.08■□□□□ 0.16
RPUSD3-215ENST00000475470 GRIN2DO15399 1336 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 ARL5CA6NH57 179 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 SMIM23A6NLE4 172 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 APOC4-APOC2K7ER74 178 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 DNALI1O14645 258 aaPredicted RBP16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 ATP2C2O75185 946 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 ACSL3O95573 720 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 APOC2P02655 101 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 FAM163BP0C2L3 166 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 ACAT1P24752 427 aaKnown RBP16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 AFF1P51825 1210 aaKnown RBP16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 MAGOHP61326 146 aaKnown RBP16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 ZSCAN26Q16670 478 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 CCSAPQ6IQ19 270 aaPredicted RBP16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 CYP4V2Q6ZWL3 525 aaPredicted RBP16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 HSFY1Q96LI6 401 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 PWWP2AQ96N64 755 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 NCAPGQ9BPX3 1015 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 DDX23Q9BUQ8 820 aaKnown RBP16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 PCDH9Q9HC56 1237 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 MIOSQ9NXC5 875 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 PADI3Q9ULW8 664 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 NOD1Q9Y239 953 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 ENDOD1O94919 500 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms