RNA–Protein interactions for RNA: ENST00000475467.1

TTC38-206, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-206ENST00000475467 FAM208BQ5VWN6 2430 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 UBE4BO95155 1302 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 USP24Q9UPU5 2620 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 KIAA1549LQ6ZVL6 1849 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 VPS37CA5D8V6 355 aaPredicted RBP13.16□□□□□ -0.3
TTC38-206ENST00000475467 GOLGA8IPA6NC78 632 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 GOLGA8JA6NMD2 632 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 TULP1O00294 542 aaPredicted RBP13.16□□□□□ -0.3
TTC38-206ENST00000475467 DCLK1O15075 740 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 KAT7O95251 611 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 CYP17A1P05093 508 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 PDIA4P13667 645 aaKnown RBP13.16□□□□□ -0.3
TTC38-206ENST00000475467 TRIM21P19474 475 aaKnown RBP13.16□□□□□ -0.3
TTC38-206ENST00000475467 LMO2P25791 158 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 YWHAQP27348 245 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 HOXC13P31276 330 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 P2RY2P41231 377 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 DHPSP49366 369 aaPredicted RBP13.16□□□□□ -0.3
TTC38-206ENST00000475467 CASP5P51878 434 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 WNT7BP56706 349 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 TNNC1P63316 161 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 RESTQ13127 1097 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 CUL4AQ13619 759 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 SLC39A14Q15043 492 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 E2F5Q15329 346 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 TCEAL6Q6IPX3 200 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 CNNM4Q6P4Q7 775 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 USP49Q70CQ1 688 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 TRAPPC11Q7Z392 1133 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 FILIP1Q7Z7B0 1213 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 TTC16Q8NEE8 873 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 TCEAL3Q969E4 200 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 SYAP1Q96A49 352 aaPredicted RBP13.16□□□□□ -0.3
TTC38-206ENST00000475467 TNIP3Q96KP6 325 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 PCIF1Q9H4Z3 704 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 PCNX2A6NKB5 2137 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 MYO16Q9Y6X6 1858 aa13.16□□□□□ -0.3
TTC38-206ENST00000475467 F8VP50 259 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 CDX4O14627 284 aaPredicted RBP13.15□□□□□ -0.3
TTC38-206ENST00000475467 AP5Z1O43299 807 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 ZNF217O75362 1048 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 ADH5P11766 374 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 PTPN1P18031 435 aaKnown RBP13.15□□□□□ -0.3
TTC38-206ENST00000475467 TNNI1P19237 187 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 CDR1P51861 262 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 TAF10Q12962 218 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 TRPC3Q13507 836 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 SNRNP35Q16560 246 aaKnown RBP13.15□□□□□ -0.3
TTC38-206ENST00000475467 TRIM61Q5EBN2 209 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 HECTD3Q5T447 861 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 PEAR1Q5VY43 1037 aaPredicted RBP13.15□□□□□ -0.3
TTC38-206ENST00000475467 HS2ST1Q7LGA3 356 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 IL17RCQ8NAC3 791 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 TXNDC5Q8NBS9 432 aaKnown RBP13.15□□□□□ -0.3
TTC38-206ENST00000475467 OR5B17Q8NGF7 314 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 OR6B3Q8NGW1 331 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 ZNF507Q8TCN5 953 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 NOC3LQ8WTT2 800 aaKnown RBP13.15□□□□□ -0.3
TTC38-206ENST00000475467 PIGKQ92643 395 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 ADAM33Q9BZ11 813 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 TPSD1Q9BZJ3 242 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 SMOC1Q9H4F8 434 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 VRTNQ9H8Y1 702 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 MAGEF1Q9HAY2 307 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 ARHGEF4Q9NR80 690 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 KBTBD4Q9NVX7 518 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 HSPBP1Q9NZL4 362 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 BCCIPQ9P287 314 aaKnown RBP eCLIP13.15□□□□□ -0.3
TTC38-206ENST00000475467 DEC1Q9P2X7 70 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 CPQQ9Y646 472 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 PI4KAP42356 2102 aa13.15□□□□□ -0.3
TTC38-206ENST00000475467 PTPRDP23468 1912 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 HOXC11O43248 304 aaPredicted RBP13.14□□□□□ -0.31
TTC38-206ENST00000475467 ATP2C2O75185 946 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 PDGFRBP09619 1106 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 MBL2P11226 248 aaPredicted RBP13.14□□□□□ -0.31
TTC38-206ENST00000475467 KIR2DL1P43626 348 aaPredicted RBP13.14□□□□□ -0.31
TTC38-206ENST00000475467 ATXN3P54252 364 aaPredicted RBP13.14□□□□□ -0.31
TTC38-206ENST00000475467 PSMC1P62191 440 aaKnown RBP13.14□□□□□ -0.31
TTC38-206ENST00000475467 IRX4P78413 519 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 GOLGA8FQ08AF8 430 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 GOLGA8DPQ0D2H9 430 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 PSMD6Q15008 389 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 DUOXA1Q1HG43 343 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 GAB4Q2WGN9 574 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 WDR72Q3MJ13 1102 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 LYSMD4Q5XG99 296 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 NAIF1Q69YI7 327 aaPredicted RBP13.14□□□□□ -0.31
TTC38-206ENST00000475467 SDE2Q6IQ49 451 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 RHBDF2Q6PJF5 856 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 HDDC3Q8N4P3 179 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 XXYLT1Q8NBI6 393 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 ZSWIM2Q8NEG5 633 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 INTS4Q96HW7 963 aaKnown RBP13.14□□□□□ -0.31
TTC38-206ENST00000475467 CGRRF1Q99675 332 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 RNF38Q9H0F5 515 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 IKZF4Q9H2S9 585 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 FBXO44Q9H4M3 255 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 IL37Q9NZH6 218 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 SLC6A14Q9UN76 642 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms