RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 ZDHHC4Q9NPG8 344 aa21.85■■□□□ 1.09
VPS36-203ENST00000475375 CRTAC1Q9NQ79 661 aa21.85■■□□□ 1.09
VPS36-203ENST00000475375 CFAP97Q9P2B7 532 aa21.85■■□□□ 1.09
VPS36-203ENST00000475375 ZNF840PA6NDX5 716 aa21.84■■□□□ 1.09
VPS36-203ENST00000475375 SRRM3A6NNA2 597 aaPredicted RBP21.84■■□□□ 1.09
VPS36-203ENST00000475375 TRIM66O15016 1216 aa21.84■■□□□ 1.09
VPS36-203ENST00000475375 KAT7O95251 611 aa21.84■■□□□ 1.09
VPS36-203ENST00000475375 ADH1CP00326 375 aa21.84■■□□□ 1.09
VPS36-203ENST00000475375 TNNC2P02585 160 aa21.84■■□□□ 1.09
VPS36-203ENST00000475375 ENGP17813 658 aa21.84■■□□□ 1.09
VPS36-203ENST00000475375 CASP5P51878 434 aa21.84■■□□□ 1.09
VPS36-203ENST00000475375 ATXN3P54252 364 aaPredicted RBP21.84■■□□□ 1.09
VPS36-203ENST00000475375 BYSLQ13895 437 aaKnown RBP21.84■■□□□ 1.09
VPS36-203ENST00000475375 EMC10Q5UCC4 262 aa21.84■■□□□ 1.09
VPS36-203ENST00000475375 RRAGBQ5VZM2 374 aa21.84■■□□□ 1.09
VPS36-203ENST00000475375 LYSMD4Q5XG99 296 aa21.84■■□□□ 1.09
VPS36-203ENST00000475375 DPH6Q7L8W6 267 aa21.84■■□□□ 1.09
VPS36-203ENST00000475375 BRAPQ7Z569 592 aa21.84■■□□□ 1.09
VPS36-203ENST00000475375 ADGRG2Q8IZP9 1017 aa21.84■■□□□ 1.09
VPS36-203ENST00000475375 KBTBD7Q8WVZ9 684 aa21.84■■□□□ 1.09
VPS36-203ENST00000475375 FNBP1Q96RU3 617 aa21.84■■□□□ 1.09
VPS36-203ENST00000475375 RNF38Q9H0F5 515 aa21.84■■□□□ 1.09
VPS36-203ENST00000475375 ARHGEF4Q9NR80 690 aa21.84■■□□□ 1.09
VPS36-203ENST00000475375 HELZP42694 1942 aaKnown RBP21.84■■□□□ 1.09
VPS36-203ENST00000475375 WDFY3Q8IZQ1 3526 aa21.84■■□□□ 1.09
VPS36-203ENST00000475375 TCRBV21S2A2A0A5A6 115 aa21.83■■□□□ 1.09
VPS36-203ENST00000475375 HOXB3P14651 431 aaPredicted RBP21.83■■□□□ 1.09
VPS36-203ENST00000475375 TXLNAP40222 546 aa21.83■■□□□ 1.09
VPS36-203ENST00000475375 PPP3CCP48454 512 aa21.83■■□□□ 1.09
VPS36-203ENST00000475375 SLC7A9P82251 487 aa21.83■■□□□ 1.09
VPS36-203ENST00000475375 MESP2Q0VG99 397 aa21.83■■□□□ 1.09
VPS36-203ENST00000475375 IFRD2Q12894 506 aaPredicted RBP21.83■■□□□ 1.09
VPS36-203ENST00000475375 HSF5Q4G112 596 aaPredicted RBP21.83■■□□□ 1.09
VPS36-203ENST00000475375 HS2ST1Q7LGA3 356 aa21.83■■□□□ 1.09
VPS36-203ENST00000475375 GPD1LQ8N335 351 aa21.83■■□□□ 1.09
VPS36-203ENST00000475375 OR5B17Q8NGF7 314 aa21.83■■□□□ 1.09
VPS36-203ENST00000475375 DNAJC19Q96DA6 116 aa21.83■■□□□ 1.09
VPS36-203ENST00000475375 CEP295NLQ96MC4 621 aa21.83■■□□□ 1.09
VPS36-203ENST00000475375 TMEM74BQ9NUR3 256 aa21.83■■□□□ 1.09
VPS36-203ENST00000475375 INTS13Q9NVM9 706 aa21.83■■□□□ 1.09
VPS36-203ENST00000475375 MBD1Q9UIS9 605 aaPredicted RBP21.83■■□□□ 1.09
VPS36-203ENST00000475375 ASCC3Q8N3C0 2202 aaKnown RBP21.83■■□□□ 1.08
VPS36-203ENST00000475375 SPAARA0A1B0GVQ0 90 aa21.82■■□□□ 1.08
VPS36-203ENST00000475375 F8VP50 259 aa21.82■■□□□ 1.08
VPS36-203ENST00000475375 MBL2P11226 248 aaPredicted RBP21.82■■□□□ 1.08
VPS36-203ENST00000475375 ADH5P11766 374 aa21.82■■□□□ 1.08
VPS36-203ENST00000475375 EIF2DP41214 584 aaKnown RBP21.82■■□□□ 1.08
VPS36-203ENST00000475375 DPP6P42658 865 aa21.82■■□□□ 1.08
VPS36-203ENST00000475375 SIM1P81133 766 aaPredicted RBP21.82■■□□□ 1.08
VPS36-203ENST00000475375 ALCAMQ13740 583 aa21.82■■□□□ 1.08
VPS36-203ENST00000475375 MDH1BQ5I0G3 518 aa21.82■■□□□ 1.08
VPS36-203ENST00000475375 TDRD10Q5VZ19 366 aaKnown RBP21.82■■□□□ 1.08
VPS36-203ENST00000475375 C12orf40Q86WS4 652 aa21.82■■□□□ 1.08
VPS36-203ENST00000475375 HDDC3Q8N4P3 179 aa21.82■■□□□ 1.08
VPS36-203ENST00000475375 PCED1BQ96HM7 432 aa21.82■■□□□ 1.08
VPS36-203ENST00000475375 TTLL2Q9BWV7 592 aa21.82■■□□□ 1.08
VPS36-203ENST00000475375 GTPBP2Q9BX10 602 aaKnown RBP21.82■■□□□ 1.08
VPS36-203ENST00000475375 SNX25Q9H3E2 840 aa21.82■■□□□ 1.08
VPS36-203ENST00000475375 OLFML3Q9NRN5 406 aa21.82■■□□□ 1.08
VPS36-203ENST00000475375 PKD1L2Q7Z442 2459 aa21.81■■□□□ 1.08
VPS36-203ENST00000475375 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.81■■□□□ 1.08
VPS36-203ENST00000475375 WARSP23381 471 aaKnown RBP21.81■■□□□ 1.08
VPS36-203ENST00000475375 ITPKAP23677 461 aa21.81■■□□□ 1.08
VPS36-203ENST00000475375 GRIA2P42262 883 aa21.81■■□□□ 1.08
VPS36-203ENST00000475375 TAF10Q12962 218 aa21.81■■□□□ 1.08
VPS36-203ENST00000475375 DUOXA2Q1HG44 320 aa21.81■■□□□ 1.08
VPS36-203ENST00000475375 RHBDF2Q6PJF5 856 aa21.81■■□□□ 1.08
VPS36-203ENST00000475375 DDX42Q86XP3 938 aaKnown RBP eCLIP21.81■■□□□ 1.08
VPS36-203ENST00000475375 KIAA1958Q8N8K9 716 aa21.81■■□□□ 1.08
VPS36-203ENST00000475375 MYCBPAPQ8TBZ2 947 aa21.81■■□□□ 1.08
VPS36-203ENST00000475375 SLITRK1Q96PX8 696 aa21.81■■□□□ 1.08
VPS36-203ENST00000475375 FGFBP2Q9BYJ0 223 aa21.81■■□□□ 1.08
VPS36-203ENST00000475375 FSCN3Q9NQT6 498 aa21.81■■□□□ 1.08
VPS36-203ENST00000475375 KLK13Q9UKR3 277 aa21.81■■□□□ 1.08
VPS36-203ENST00000475375 NEUROG3Q9Y4Z2 214 aa21.81■■□□□ 1.08
VPS36-203ENST00000475375 GON4LQ3T8J9 2241 aa21.81■■□□□ 1.08
VPS36-203ENST00000475375 PTPRJQ12913 1337 aa21.8■■□□□ 1.08
VPS36-203ENST00000475375 PRPF6O94906 941 aaKnown RBP21.8■■□□□ 1.08
VPS36-203ENST00000475375 TNFRSF4P43489 277 aa21.8■■□□□ 1.08
VPS36-203ENST00000475375 KIR2DL1P43626 348 aaPredicted RBP21.8■■□□□ 1.08
VPS36-203ENST00000475375 NOP14P78316 857 aaKnown RBP21.8■■□□□ 1.08
VPS36-203ENST00000475375 MAP7D1Q3KQU3 841 aa21.8■■□□□ 1.08
VPS36-203ENST00000475375 SLC23A3Q6PIS1 610 aa21.8■■□□□ 1.08
VPS36-203ENST00000475375 DEFB119Q8N690 84 aa21.8■■□□□ 1.08
VPS36-203ENST00000475375 C8orf48Q96LL4 319 aa21.8■■□□□ 1.08
VPS36-203ENST00000475375 PANK4Q9NVE7 773 aa21.8■■□□□ 1.08
VPS36-203ENST00000475375 CACNA1EQ15878 2313 aa21.79■■□□□ 1.08
VPS36-203ENST00000475375 DMXL2Q8TDJ6 3036 aa21.79■■□□□ 1.08
VPS36-203ENST00000475375 TBC1D3BA6NDS4 549 aa21.79■■□□□ 1.08
VPS36-203ENST00000475375 ZNF233A6NK53 670 aa21.79■■□□□ 1.08
VPS36-203ENST00000475375 AP5Z1O43299 807 aa21.79■■□□□ 1.08
VPS36-203ENST00000475375 ADAM23O75077 832 aa21.79■■□□□ 1.08
VPS36-203ENST00000475375 OAS1P00973 400 aaKnown RBP21.79■■□□□ 1.08
VPS36-203ENST00000475375 RDXP35241 583 aaKnown RBP21.79■■□□□ 1.08
VPS36-203ENST00000475375 GNL1P36915 607 aaPredicted RBP21.79■■□□□ 1.08
VPS36-203ENST00000475375 RPL6Q02878 288 aaKnown RBP21.79■■□□□ 1.08
VPS36-203ENST00000475375 GFPT1Q06210 699 aaPredicted RBP21.79■■□□□ 1.08
VPS36-203ENST00000475375 SURF1Q15526 300 aa21.79■■□□□ 1.08
VPS36-203ENST00000475375 SPDYCQ5MJ68 293 aa21.79■■□□□ 1.08
VPS36-203ENST00000475375 LY6G5CQ5SRR4 150 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms