RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 MAPRE1Q15691 268 aaKnown RBP11.35□□□□□ -0.59
VAPB-204ENST00000475243 POTEAQ6S8J7 498 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 AGGF1Q8N302 714 aaeCLIP11.35□□□□□ -0.59
VAPB-204ENST00000475243 OSBPL10Q9BXB5 764 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 ILKAPQ9H0C8 392 aaPredicted RBP11.35□□□□□ -0.59
VAPB-204ENST00000475243 OSGEPL1Q9H4B0 414 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 AAASQ9NRG9 546 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 USP18Q9UMW8 372 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 TIMM13Q9Y5L4 95 aaPredicted RBP11.35□□□□□ -0.59
VAPB-204ENST00000475243 IGF2BP3O00425 579 aaKnown RBP eCLIP11.35□□□□□ -0.59
VAPB-204ENST00000475243 C11orf63Q6NUN7 778 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 CCT7Q99832 543 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 NFIAQ12857 509 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 ZNF512BQ96KM6 892 aaPredicted RBP11.35□□□□□ -0.59
VAPB-204ENST00000475243 CIPCQ9C0C6 399 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 CAAP1Q9H8G2 361 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 TRIM66O15016 1216 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 MTSS1O43312 755 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 POMCP01189 267 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 ITGB6P18564 788 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 FAM131BQ86XD5 332 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 FAM172AQ8WUF8 416 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 PRPF18Q99633 342 aaKnown RBP11.34□□□□□ -0.59
VAPB-204ENST00000475243 IL25Q9H293 177 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 CPA4Q9UI42 421 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 UBXN8O00124 270 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 RNF103O00237 685 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 OGTO15294 1046 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 THP07101 528 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 CD44P16070 742 aaKnown RBP11.34□□□□□ -0.59
VAPB-204ENST00000475243 CAP2P40123 477 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 LY6KQ17RY6 165 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 TTLL9Q3SXZ7 439 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 SLC13A5Q86YT5 568 aaPredicted RBP11.34□□□□□ -0.59
VAPB-204ENST00000475243 CASKIN2Q8WXE0 1202 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 LINC00854A0A1B0GVQ3 168 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 SPAG6O75602 509 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 PARNO95453 639 aaKnown RBP11.34□□□□□ -0.59
VAPB-204ENST00000475243 ALBP02768 609 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 NPTX2P47972 431 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 GTF2A2P52657 109 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 GRB10Q13322 594 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 DYNC1I2Q13409 638 aaKnown RBP11.34□□□□□ -0.59
VAPB-204ENST00000475243 CAMK2GQ13555 558 aaPredicted RBP11.34□□□□□ -0.59
VAPB-204ENST00000475243 TEX9Q8N6V9 391 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 PDLIM2Q96JY6 352 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 NT5MQ9NPB1 228 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 KRT84Q9NSB2 600 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 JCADQ9P266 1359 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 ENO4A6NNW6 628 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 SNRPFP62306 86 aaKnown RBP11.34□□□□□ -0.59
VAPB-204ENST00000475243 RUNX1T1Q06455 604 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 CYP51A1Q16850 503 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 BBS7Q8IWZ6 715 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 RGS5O15539 181 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 STRNO43815 780 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 GSTM1P09488 218 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 CYP11B1P15538 503 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 VN1R5Q7Z5H4 357 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 EMC1Q8N766 993 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 TNIP2Q8NFZ5 429 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 OSMRQ99650 979 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 TSEN34Q9BSV6 310 aaKnown RBP11.34□□□□□ -0.59
VAPB-204ENST00000475243 ROPN1BQ9BZX4 212 aaPredicted RBP11.34□□□□□ -0.59
VAPB-204ENST00000475243 ROPN1Q9HAT0 212 aaPredicted RBP11.34□□□□□ -0.59
VAPB-204ENST00000475243 HEY2Q9UBP5 337 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 UBQLN1Q9UMX0 589 aaKnown RBP11.34□□□□□ -0.59
VAPB-204ENST00000475243 AGRPO00253 132 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 SLC26A4O43511 780 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 WBP4O75554 376 aaKnown RBP11.34□□□□□ -0.59
VAPB-204ENST00000475243 CTXN3Q4LDR2 81 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 B3GALNT2Q8NCR0 500 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 FBXO36Q8NEA4 188 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 ZNF333Q96JL9 665 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 CEP41Q9BYV8 373 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 VPS33BQ9H267 617 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 CCDC134Q9H6E4 229 aa11.34□□□□□ -0.59
VAPB-204ENST00000475243 M0R3G1 203 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 CPSF4O95639 269 aaKnown RBP11.33□□□□□ -0.6
VAPB-204ENST00000475243 FDFT1P37268 417 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 RGS2P41220 211 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 STRA8Q7Z7C7 330 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 GTF3C2Q8WUA4 911 aaPredicted RBP11.33□□□□□ -0.6
VAPB-204ENST00000475243 MKNK1Q9BUB5 465 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 PTPRHQ9HD43 1115 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 PIH1D1Q9NWS0 290 aaKnown RBP11.33□□□□□ -0.6
VAPB-204ENST00000475243 BLOC1S6Q9UL45 172 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 CAB39Q9Y376 341 aaPredicted RBP11.33□□□□□ -0.6
VAPB-204ENST00000475243 E9PCH4 1651 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 CCT8L1PA6NM43 557 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 PHKG1Q16816 387 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 MRNIPQ6NTE8 343 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 PHACTR4Q8IZ21 702 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 MED8Q96G25 268 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 BBS2Q9BXC9 721 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 IQSEC2Q5JU85 1478 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 DEAF1O75398 565 aaPredicted RBP11.33□□□□□ -0.6
VAPB-204ENST00000475243 NAMPTP43490 491 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 BOLA3Q53S33 107 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 EDEM1Q92611 657 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms