RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 F8VP50 259 aa16.65■□□□□ 0.26
SRRT-209ENST00000474896 SCAMP3O14828 347 aaKnown RBP16.65■□□□□ 0.26
SRRT-209ENST00000474896 CYP17A1P05093 508 aa16.65■□□□□ 0.26
SRRT-209ENST00000474896 HOXD13P35453 343 aa16.65■□□□□ 0.26
SRRT-209ENST00000474896 NOP14P78316 857 aaKnown RBP16.65■□□□□ 0.26
SRRT-209ENST00000474896 MRPS21P82921 87 aaKnown RBP16.65■□□□□ 0.26
SRRT-209ENST00000474896 TAF10Q12962 218 aa16.65■□□□□ 0.26
SRRT-209ENST00000474896 DHCR24Q15392 516 aa16.65■□□□□ 0.26
SRRT-209ENST00000474896 TDRD10Q5VZ19 366 aaKnown RBP16.65■□□□□ 0.26
SRRT-209ENST00000474896 TMEM92Q6UXU6 159 aa16.65■□□□□ 0.26
SRRT-209ENST00000474896 WDR49Q8IV35 697 aa16.65■□□□□ 0.26
SRRT-209ENST00000474896 SFTPA1Q8IWL2 248 aa16.65■□□□□ 0.26
SRRT-209ENST00000474896 MDGA1Q8NFP4 955 aa16.65■□□□□ 0.26
SRRT-209ENST00000474896 OR6B3Q8NGW1 331 aa16.65■□□□□ 0.26
SRRT-209ENST00000474896 CNOT6LQ96LI5 555 aaKnown RBP16.65■□□□□ 0.26
SRRT-209ENST00000474896 C8orf48Q96LL4 319 aa16.65■□□□□ 0.26
SRRT-209ENST00000474896 ZNF396Q96N95 335 aaPredicted RBP16.65■□□□□ 0.26
SRRT-209ENST00000474896 KIAA1586Q9HCI6 787 aa16.65■□□□□ 0.26
SRRT-209ENST00000474896 NME7Q9Y5B8 376 aa16.65■□□□□ 0.26
SRRT-209ENST00000474896 CPQQ9Y646 472 aa16.65■□□□□ 0.26
SRRT-209ENST00000474896 MYOFQ9NZM1 2061 aa16.65■□□□□ 0.26
SRRT-209ENST00000474896 HELZP42694 1942 aaKnown RBP16.64■□□□□ 0.26
SRRT-209ENST00000474896 PATE3B3GLJ2 98 aa16.64■□□□□ 0.25
SRRT-209ENST00000474896 SLC9A3R1O14745 358 aaPredicted RBP16.64■□□□□ 0.25
SRRT-209ENST00000474896 DLATP10515 647 aaKnown RBP16.64■□□□□ 0.25
SRRT-209ENST00000474896 HNRNPLP14866 589 aaKnown RBP eCLIP16.64■□□□□ 0.25
SRRT-209ENST00000474896 PTPN1P18031 435 aaKnown RBP16.64■□□□□ 0.25
SRRT-209ENST00000474896 TNNI1P19237 187 aa16.64■□□□□ 0.25
SRRT-209ENST00000474896 TIE1P35590 1138 aa16.64■□□□□ 0.25
SRRT-209ENST00000474896 DHPSP49366 369 aaPredicted RBP16.64■□□□□ 0.25
SRRT-209ENST00000474896 IRX4P78413 519 aa16.64■□□□□ 0.25
SRRT-209ENST00000474896 MESP2Q0VG99 397 aa16.64■□□□□ 0.25
SRRT-209ENST00000474896 SH3PXD2AQ5TCZ1 1133 aa16.64■□□□□ 0.25
SRRT-209ENST00000474896 EMC10Q5UCC4 262 aa16.64■□□□□ 0.25
SRRT-209ENST00000474896 RHBDF2Q6PJF5 856 aa16.64■□□□□ 0.25
SRRT-209ENST00000474896 CYP2U1Q7Z449 544 aa16.64■□□□□ 0.25
SRRT-209ENST00000474896 ALLCQ8N6M5 410 aa16.64■□□□□ 0.25
SRRT-209ENST00000474896 KIAA1958Q8N8K9 716 aa16.64■□□□□ 0.25
SRRT-209ENST00000474896 PIGKQ92643 395 aa16.64■□□□□ 0.25
SRRT-209ENST00000474896 USP28Q96RU2 1077 aa16.64■□□□□ 0.25
SRRT-209ENST00000474896 PNKPQ96T60 521 aa16.64■□□□□ 0.25
SRRT-209ENST00000474896 TMEM9BQ9NQ34 198 aa16.64■□□□□ 0.25
SRRT-209ENST00000474896 CFAP97Q9P2B7 532 aa16.64■□□□□ 0.25
SRRT-209ENST00000474896 ATP6V1DQ9Y5K8 247 aa16.64■□□□□ 0.25
SRRT-209ENST00000474896 CDX4O14627 284 aaPredicted RBP16.63■□□□□ 0.25
SRRT-209ENST00000474896 TACC1O75410 805 aa16.63■□□□□ 0.25
SRRT-209ENST00000474896 ALDH1A2O94788 518 aa16.63■□□□□ 0.25
SRRT-209ENST00000474896 KAT7O95251 611 aa16.63■□□□□ 0.25
SRRT-209ENST00000474896 KLF8O95600 359 aaPredicted RBP16.63■□□□□ 0.25
SRRT-209ENST00000474896 OLFM2O95897 454 aa16.63■□□□□ 0.25
SRRT-209ENST00000474896 OAS1P00973 400 aaKnown RBP16.63■□□□□ 0.25
SRRT-209ENST00000474896 APODP05090 189 aa16.63■□□□□ 0.25
SRRT-209ENST00000474896 FAM163BP0C2L3 166 aa16.63■□□□□ 0.25
SRRT-209ENST00000474896 CACNA2D1P54289 1103 aa16.63■□□□□ 0.25
SRRT-209ENST00000474896 DNM1Q05193 864 aaKnown RBP16.63■□□□□ 0.25
SRRT-209ENST00000474896 IFRD2Q12894 506 aaPredicted RBP16.63■□□□□ 0.25
SRRT-209ENST00000474896 WDR72Q3MJ13 1102 aa16.63■□□□□ 0.25
SRRT-209ENST00000474896 IL17RCQ8NAC3 791 aa16.63■□□□□ 0.25
SRRT-209ENST00000474896 TXNDC5Q8NBS9 432 aaKnown RBP16.63■□□□□ 0.25
SRRT-209ENST00000474896 RLN3Q8WXF3 142 aa16.63■□□□□ 0.25
SRRT-209ENST00000474896 CCDC127Q96BQ5 260 aa16.63■□□□□ 0.25
SRRT-209ENST00000474896 LRRC27Q9C0I9 530 aa16.63■□□□□ 0.25
SRRT-209ENST00000474896 MORC2Q9Y6X9 1032 aaPredicted RBP16.63■□□□□ 0.25
SRRT-209ENST00000474896 PTPRDP23468 1912 aa16.62■□□□□ 0.25
SRRT-209ENST00000474896 GON4LQ3T8J9 2241 aa16.62■□□□□ 0.25
SRRT-209ENST00000474896 A0A0A0MRY4 1105 aa16.62■□□□□ 0.25
SRRT-209ENST00000474896 SGK1O00141 431 aa16.62■□□□□ 0.25
SRRT-209ENST00000474896 CLDN5O00501 218 aa16.62■□□□□ 0.25
SRRT-209ENST00000474896 CLIC2O15247 247 aa16.62■□□□□ 0.25
SRRT-209ENST00000474896 MAP3K13O43283 966 aa16.62■□□□□ 0.25
SRRT-209ENST00000474896 PROS1P07225 676 aa16.62■□□□□ 0.25
SRRT-209ENST00000474896 MBL2P11226 248 aaPredicted RBP16.62■□□□□ 0.25
SRRT-209ENST00000474896 TNNC1P63316 161 aa16.62■□□□□ 0.25
SRRT-209ENST00000474896 SNRNP35Q16560 246 aaKnown RBP16.62■□□□□ 0.25
SRRT-209ENST00000474896 UAP1L1Q3KQV9 507 aa16.62■□□□□ 0.25
SRRT-209ENST00000474896 ATL3Q6DD88 541 aa16.62■□□□□ 0.25
SRRT-209ENST00000474896 C12orf40Q86WS4 652 aa16.62■□□□□ 0.25
SRRT-209ENST00000474896 FRMD1Q8N878 549 aa16.62■□□□□ 0.25
SRRT-209ENST00000474896 OLIG1Q8TAK6 271 aa16.62■□□□□ 0.25
SRRT-209ENST00000474896 ZNF507Q8TCN5 953 aa16.62■□□□□ 0.25
SRRT-209ENST00000474896 SLITRK1Q96PX8 696 aa16.62■□□□□ 0.25
SRRT-209ENST00000474896 FNBP1Q96RU3 617 aa16.62■□□□□ 0.25
SRRT-209ENST00000474896 B3GNT5Q9BYG0 378 aa16.62■□□□□ 0.25
SRRT-209ENST00000474896 ZNF518BQ9C0D4 1074 aa16.62■□□□□ 0.25
SRRT-209ENST00000474896 TNMDQ9H2S6 317 aa16.62■□□□□ 0.25
SRRT-209ENST00000474896 DPEP3Q9H4B8 488 aa16.62■□□□□ 0.25
SRRT-209ENST00000474896 TMEM30AQ9NV96 361 aa16.62■□□□□ 0.25
SRRT-209ENST00000474896 TFIP11Q9UBB9 837 aaKnown RBP16.62■□□□□ 0.25
SRRT-209ENST00000474896 CHORDC1Q9UHD1 332 aaPredicted RBP16.62■□□□□ 0.25
SRRT-209ENST00000474896 ZFHX4Q86UP3 3567 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 A8MXQ7 604 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 EIF3DO15371 548 aaKnown RBP eCLIP16.61■□□□□ 0.256e-6■■□□□ 11.9
SRRT-209ENST00000474896 TGFB1I1O43294 461 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 ADH1CP00326 375 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 ADH5P11766 374 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 CEACAM1P13688 526 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 YWHAQP27348 245 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 EIF2DP41214 584 aaKnown RBP16.61■□□□□ 0.25
SRRT-209ENST00000474896 GRIA2P42262 883 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms