RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 GBP2P32456 591 aaPredicted RBP17.9■□□□□ 0.46
SCAF11-206ENST00000474828 PLA2G4AP47712 749 aa17.9■□□□□ 0.46
SCAF11-206ENST00000474828 KLK7P49862 253 aa17.9■□□□□ 0.46
SCAF11-206ENST00000474828 TPM4P67936 248 aa17.9■□□□□ 0.46
SCAF11-206ENST00000474828 DRAP1Q14919 205 aaPredicted RBP17.9■□□□□ 0.46
SCAF11-206ENST00000474828 TEAD2Q15562 447 aa17.9■□□□□ 0.46
SCAF11-206ENST00000474828 MON1AQ86VX9 555 aa17.9■□□□□ 0.46
SCAF11-206ENST00000474828 SCML4Q8N228 414 aa17.9■□□□□ 0.46
SCAF11-206ENST00000474828 ZNF276Q8N554 614 aa17.9■□□□□ 0.46
SCAF11-206ENST00000474828 STKLD1Q8NE28 680 aa17.9■□□□□ 0.46
SCAF11-206ENST00000474828 ZNF606Q8WXB4 792 aa17.9■□□□□ 0.46
SCAF11-206ENST00000474828 TASP1Q9H6P5 420 aa17.9■□□□□ 0.46
SCAF11-206ENST00000474828 PCDHGC3Q9UN70 934 aa17.9■□□□□ 0.46
SCAF11-206ENST00000474828 DENND4CQ5VZ89 1909 aa17.9■□□□□ 0.46
SCAF11-206ENST00000474828 OBSL1O75147 1896 aa17.89■□□□□ 0.45
SCAF11-206ENST00000474828 ZNF840PA6NDX5 716 aa17.89■□□□□ 0.45
SCAF11-206ENST00000474828 ECI2O75521 394 aa17.89■□□□□ 0.45
SCAF11-206ENST00000474828 YWHAQP27348 245 aa17.89■□□□□ 0.45
SCAF11-206ENST00000474828 FANCCQ00597 558 aa17.89■□□□□ 0.45
SCAF11-206ENST00000474828 PDE4CQ08493 712 aa17.89■□□□□ 0.45
SCAF11-206ENST00000474828 BST2Q10589 180 aaKnown RBP17.89■□□□□ 0.45
SCAF11-206ENST00000474828 TAF12Q16514 161 aa17.89■□□□□ 0.45
SCAF11-206ENST00000474828 ARHGAP44Q17R89 818 aa17.89■□□□□ 0.45
SCAF11-206ENST00000474828 GOLGA7BQ2TAP0 167 aa17.89■□□□□ 0.45
SCAF11-206ENST00000474828 PM20D1Q6GTS8 502 aa17.89■□□□□ 0.45
SCAF11-206ENST00000474828 MTSS1LQ765P7 747 aa17.89■□□□□ 0.45
SCAF11-206ENST00000474828 GPRIN1Q7Z2K8 1008 aa17.89■□□□□ 0.45
SCAF11-206ENST00000474828 PIGZQ86VD9 579 aa17.89■□□□□ 0.45
SCAF11-206ENST00000474828 PDZD8Q8NEN9 1154 aa17.89■□□□□ 0.45
SCAF11-206ENST00000474828 SCAMP5Q8TAC9 235 aa17.89■□□□□ 0.45
SCAF11-206ENST00000474828 STK32AQ8WU08 396 aa17.89■□□□□ 0.45
SCAF11-206ENST00000474828 SMARCD2Q92925 531 aa17.89■□□□□ 0.45
SCAF11-206ENST00000474828 SLC46A2Q9BY10 475 aa17.89■□□□□ 0.45
SCAF11-206ENST00000474828 ATXN3LQ9H3M9 355 aa17.89■□□□□ 0.45
SCAF11-206ENST00000474828 FBXO44Q9H4M3 255 aa17.89■□□□□ 0.45
SCAF11-206ENST00000474828 KCNK12Q9HB15 430 aa17.89■□□□□ 0.45
SCAF11-206ENST00000474828 OBP2AQ9NY56 170 aa17.89■□□□□ 0.45
SCAF11-206ENST00000474828 LIMD1Q9UGP4 676 aa17.89■□□□□ 0.45
SCAF11-206ENST00000474828 SCML2Q9UQR0 700 aa17.89■□□□□ 0.45
SCAF11-206ENST00000474828 GOLGA6L19H0YKK7 550 aa17.88■□□□□ 0.45
SCAF11-206ENST00000474828 CYP26A1O43174 497 aa17.88■□□□□ 0.45
SCAF11-206ENST00000474828 KRT5P13647 590 aa17.88■□□□□ 0.45
SCAF11-206ENST00000474828 CD19P15391 556 aa17.88■□□□□ 0.45
SCAF11-206ENST00000474828 TCF3P15923 654 aa17.88■□□□□ 0.45
SCAF11-206ENST00000474828 GJA1P17302 382 aa17.88■□□□□ 0.45
SCAF11-206ENST00000474828 BRD2P25440 801 aaKnown RBP17.88■□□□□ 0.45
SCAF11-206ENST00000474828 GPD2P43304 727 aa17.88■□□□□ 0.45
SCAF11-206ENST00000474828 TUBP50607 506 aa17.88■□□□□ 0.45
SCAF11-206ENST00000474828 BPIFB4P59827 614 aa17.88■□□□□ 0.45
SCAF11-206ENST00000474828 TAF10Q12962 218 aa17.88■□□□□ 0.45
SCAF11-206ENST00000474828 ZNF268Q14587 947 aaPredicted RBP17.88■□□□□ 0.45
SCAF11-206ENST00000474828 PTPN21Q16825 1174 aa17.88■□□□□ 0.45
SCAF11-206ENST00000474828 FILIP1LQ4L180 1135 aa17.88■□□□□ 0.45
SCAF11-206ENST00000474828 FIGNQ5HY92 759 aa17.88■□□□□ 0.45
SCAF11-206ENST00000474828 FAM78AQ5JUQ0 283 aa17.88■□□□□ 0.45
SCAF11-206ENST00000474828 STXBP5Q5T5C0 1151 aa17.88■□□□□ 0.45
SCAF11-206ENST00000474828 CCDC186Q7Z3E2 898 aa17.88■□□□□ 0.45
SCAF11-206ENST00000474828 ING5Q8WYH8 240 aa17.88■□□□□ 0.45
SCAF11-206ENST00000474828 DDX1Q92499 740 aaKnown RBP17.88■□□□□ 0.45
SCAF11-206ENST00000474828 FGF14Q92915 247 aa17.88■□□□□ 0.45
SCAF11-206ENST00000474828 ELSPBP1Q96BH3 223 aa17.88■□□□□ 0.45
SCAF11-206ENST00000474828 MCRS1Q96EZ8 462 aa17.88■□□□□ 0.45
SCAF11-206ENST00000474828 TTYH3Q9C0H2 523 aa17.88■□□□□ 0.45
SCAF11-206ENST00000474828 FAM207AQ9NSI2 230 aaPredicted RBP17.88■□□□□ 0.45
SCAF11-206ENST00000474828 HESX1Q9UBX0 185 aa17.88■□□□□ 0.45
SCAF11-206ENST00000474828 MYO6Q9UM54 1294 aa17.88■□□□□ 0.45
SCAF11-206ENST00000474828 MAGED2Q9UNF1 606 aaPredicted RBP17.88■□□□□ 0.45
SCAF11-206ENST00000474828 TULP2O00295 520 aa17.87■□□□□ 0.45
SCAF11-206ENST00000474828 MED7O43513 233 aa17.87■□□□□ 0.45
SCAF11-206ENST00000474828 GABBR2O75899 941 aa17.87■□□□□ 0.45
SCAF11-206ENST00000474828 OAS1P00973 400 aaKnown RBP17.87■□□□□ 0.45
SCAF11-206ENST00000474828 GNA15P30679 374 aa17.87■□□□□ 0.45
SCAF11-206ENST00000474828 SLC8A3P57103 927 aa17.87■□□□□ 0.45
SCAF11-206ENST00000474828 POLR2FP61218 127 aaKnown RBP17.87■□□□□ 0.45
SCAF11-206ENST00000474828 PTK2Q05397 1052 aa17.87■□□□□ 0.45
SCAF11-206ENST00000474828 ARHGAP15Q53QZ3 475 aa17.87■□□□□ 0.45
SCAF11-206ENST00000474828 PARM1Q6UWI2 310 aa17.87■□□□□ 0.45
SCAF11-206ENST00000474828 BHLHA9Q7RTU4 235 aa17.87■□□□□ 0.45
SCAF11-206ENST00000474828 CMTM8Q8IZV2 173 aa17.87■□□□□ 0.45
SCAF11-206ENST00000474828 KIAA1958Q8N8K9 716 aa17.87■□□□□ 0.45
SCAF11-206ENST00000474828 MRPS31Q92665 395 aaKnown RBP17.87■□□□□ 0.45
SCAF11-206ENST00000474828 E2F7Q96AV8 911 aa17.87■□□□□ 0.45
SCAF11-206ENST00000474828 HSFY1Q96LI6 401 aa17.87■□□□□ 0.45
SCAF11-206ENST00000474828 SLITRK1Q96PX8 696 aa17.87■□□□□ 0.45
SCAF11-206ENST00000474828 GCNAQ96QF7 691 aa17.87■□□□□ 0.45
SCAF11-206ENST00000474828 EDEM3Q9BZQ6 932 aa17.87■□□□□ 0.45
SCAF11-206ENST00000474828 LHX5Q9H2C1 402 aa17.87■□□□□ 0.45
SCAF11-206ENST00000474828 ACP6Q9NPH0 428 aa17.87■□□□□ 0.45
SCAF11-206ENST00000474828 CYLDQ9NQC7 956 aa17.87■□□□□ 0.45
SCAF11-206ENST00000474828 TRPM5Q9NZQ8 1165 aa17.87■□□□□ 0.45
SCAF11-206ENST00000474828 SORCS3Q9UPU3 1222 aa17.87■□□□□ 0.45
SCAF11-206ENST00000474828 ZNF638Q14966 1978 aaKnown RBP17.86■□□□□ 0.45
SCAF11-206ENST00000474828 CALCAP01258 141 aa17.86■□□□□ 0.45
SCAF11-206ENST00000474828 SP100P23497 879 aaPredicted RBP17.86■□□□□ 0.45
SCAF11-206ENST00000474828 CDH5P33151 784 aaPredicted RBP17.86■□□□□ 0.45
SCAF11-206ENST00000474828 CYP4F8P98187 520 aa17.86■□□□□ 0.45
SCAF11-206ENST00000474828 GPR158Q5T848 1215 aa17.86■□□□□ 0.45
SCAF11-206ENST00000474828 SLC47A2Q86VL8 602 aa17.86■□□□□ 0.45
SCAF11-206ENST00000474828 SLC44A3Q8N4M1 653 aa17.86■□□□□ 0.45
SCAF11-206ENST00000474828 NEK11Q8NG66 645 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms